RNA–Protein interactions for RNA: ENST00000534313.5

SIPA1-209, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,521 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-209ENST00000534313 BECN1Q14457 450 aa21.97■■□□□ 1.11
SIPA1-209ENST00000534313 YEATS2Q9ULM3 1422 aa21.96■■□□□ 1.11
SIPA1-209ENST00000534313 TERF2IPQ9NYB0 399 aa21.96■■□□□ 1.11
SIPA1-209ENST00000534313 MFAP1P55081 439 aaKnown RBP21.95■■□□□ 1.1
SIPA1-209ENST00000534313 ARHGEF28Q8N1W1 1705 aaKnown RBP21.95■■□□□ 1.1
SIPA1-209ENST00000534313 ABCC11Q96J66 1382 aa21.95■■□□□ 1.1
SIPA1-209ENST00000534313 CDK19Q9BWU1 502 aa21.95■■□□□ 1.1
SIPA1-209ENST00000534313 NSD2O96028 1365 aa21.95■■□□□ 1.1
SIPA1-209ENST00000534313 DIAPH1O60610 1272 aaKnown RBP21.94■■□□□ 1.1
SIPA1-209ENST00000534313 TMEM57Q8N5G2 664 aa21.94■■□□□ 1.1
SIPA1-209ENST00000534313 THUMPD2Q9BTF0 503 aaKnown RBP21.94■■□□□ 1.1
SIPA1-209ENST00000534313 WAPLQ7Z5K2 1190 aa21.93■■□□□ 1.1
SIPA1-209ENST00000534313 HMOX1P09601 288 aa21.93■■□□□ 1.1
SIPA1-209ENST00000534313 ATF7IPQ6VMQ6 1270 aa21.93■■□□□ 1.1
SIPA1-209ENST00000534313 NLRP1Q9C000 1473 aa21.92■■□□□ 1.1
SIPA1-209ENST00000534313 TBC1D32Q96NH3 1257 aa21.92■■□□□ 1.1
SIPA1-209ENST00000534313 TBC1D2Q9BYX2 928 aa21.92■■□□□ 1.1
SIPA1-209ENST00000534313 PUS7Q96PZ0 661 aaKnown RBP21.92■■□□□ 1.1
SIPA1-209ENST00000534313 SLC52A1Q9NWF4 448 aa21.92■■□□□ 1.1
SIPA1-209ENST00000534313 ELL2O00472 640 aaPredicted RBP21.91■■□□□ 1.1
SIPA1-209ENST00000534313 HDGFL2Q7Z4V5 671 aaPredicted RBP21.91■■□□□ 1.1
SIPA1-209ENST00000534313 PRKAR2BP31323 418 aa21.89■■□□□ 1.1
SIPA1-209ENST00000534313 USP32Q8NFA0 1604 aa21.89■■□□□ 1.1
SIPA1-209ENST00000534313 AAMPQ13685 434 aa21.89■■□□□ 1.09
SIPA1-209ENST00000534313 MLECQ14165 292 aa21.88■■□□□ 1.09
SIPA1-209ENST00000534313 DDX19BQ9UMR2 479 aa21.88■■□□□ 1.09
SIPA1-209ENST00000534313 PIK3C2BO00750 1634 aa21.88■■□□□ 1.09
SIPA1-209ENST00000534313 ATAD2Q6PL18 1390 aa21.87■■□□□ 1.09
SIPA1-209ENST00000534313 YTHDC2Q9H6S0 1430 aaKnown RBP21.87■■□□□ 1.09
SIPA1-209ENST00000534313 DIP2CQ9Y2E4 1556 aa21.86■■□□□ 1.09
SIPA1-209ENST00000534313 LNPKQ9C0E8 428 aa21.86■■□□□ 1.09
SIPA1-209ENST00000534313 C1orf115Q9H7X2 142 aa21.86■■□□□ 1.09
SIPA1-209ENST00000534313 PHACTR3Q96KR7 559 aa21.86■■□□□ 1.09
SIPA1-209ENST00000534313 ZRANB1Q9UGI0 708 aa21.85■■□□□ 1.09
SIPA1-209ENST00000534313 PTPRMP28827 1452 aa21.85■■□□□ 1.09
SIPA1-209ENST00000534313 CFAP74Q9C0B2 1584 aa21.85■■□□□ 1.09
SIPA1-209ENST00000534313 VIRMAQ69YN4 1812 aaKnown RBP21.85■■□□□ 1.09
SIPA1-209ENST00000534313 CD163L1Q9NR16 1453 aa21.85■■□□□ 1.09
SIPA1-209ENST00000534313 ADGRB2O60241 1585 aa21.84■■□□□ 1.09
SIPA1-209ENST00000534313 C22orf23Q9BZE7 217 aa21.84■■□□□ 1.09
SIPA1-209ENST00000534313 MYO5BQ9ULV0 1848 aa21.84■■□□□ 1.09
SIPA1-209ENST00000534313 COL3A1P02461 1466 aaPredicted RBP21.84■■□□□ 1.09
SIPA1-209ENST00000534313 EMILIN1Q9Y6C2 1016 aa21.84■■□□□ 1.09
SIPA1-209ENST00000534313 ANTXR1Q9H6X2 564 aa21.83■■□□□ 1.08
SIPA1-209ENST00000534313 CT47B1P0C2W7 299 aaPredicted RBP21.83■■□□□ 1.08
SIPA1-209ENST00000534313 POLKQ9UBT6 870 aa21.83■■□□□ 1.08
SIPA1-209ENST00000534313 NCKAP5LQ9HCH0 1330 aa21.82■■□□□ 1.08
SIPA1-209ENST00000534313 CYB5RLQ6IPT4 315 aa21.81■■□□□ 1.08
SIPA1-209ENST00000534313 TSPYL6Q8N831 410 aa21.81■■□□□ 1.08
SIPA1-209ENST00000534313 ZBTB40Q9NUA8 1239 aa21.81■■□□□ 1.08
SIPA1-209ENST00000534313 HDAC1Q13547 482 aaPredicted RBP21.81■■□□□ 1.08
SIPA1-209ENST00000534313 GZF1Q9H116 711 aaPredicted RBP21.8■■□□□ 1.08
SIPA1-209ENST00000534313 RSPH6AQ9H0K4 717 aa21.79■■□□□ 1.08
SIPA1-209ENST00000534313 NEO1Q92859 1461 aa21.79■■□□□ 1.08
SIPA1-209ENST00000534313 NME9Q86XW9 330 aa21.79■■□□□ 1.08
SIPA1-209ENST00000534313 ARHGAP31Q2M1Z3 1444 aa21.79■■□□□ 1.08
SIPA1-209ENST00000534313 IPO8O15397 1037 aaKnown RBP21.79■■□□□ 1.08
SIPA1-209ENST00000534313 NCBP3Q53F19 620 aaKnown RBP21.78■■□□□ 1.08
SIPA1-209ENST00000534313 FCHSD2O94868 740 aa21.77■■□□□ 1.08
SIPA1-209ENST00000534313 SMC5Q8IY18 1101 aa21.77■■□□□ 1.08
SIPA1-209ENST00000534313 KIF16BQ96L93 1317 aa21.77■■□□□ 1.08
SIPA1-209ENST00000534313 RRS1Q15050 365 aaKnown RBP21.77■■□□□ 1.08
SIPA1-209ENST00000534313 IL16Q14005 1332 aa21.76■■□□□ 1.07
SIPA1-209ENST00000534313 ZFYVE9O95405 1425 aa21.76■■□□□ 1.07
SIPA1-209ENST00000534313 FAM83GA6ND36 823 aa21.75■■□□□ 1.07
SIPA1-209ENST00000534313 DCTN1Q14203 1278 aa21.75■■□□□ 1.07
SIPA1-209ENST00000534313 ANKRD45Q5TZF3 282 aa21.75■■□□□ 1.07
SIPA1-209ENST00000534313 NAP1L5Q96NT1 182 aaPredicted RBP21.75■■□□□ 1.07
SIPA1-209ENST00000534313 PNNQ9H307 717 aaKnown RBP21.75■■□□□ 1.07
SIPA1-209ENST00000534313 TXNDC2Q86VQ3 553 aa21.74■■□□□ 1.07
SIPA1-209ENST00000534313 TMEM131LA2VDJ0 1609 aa21.74■■□□□ 1.07
SIPA1-209ENST00000534313 PNPLA6Q8IY17 1366 aa21.73■■□□□ 1.07
SIPA1-209ENST00000534313 LRRC7Q96NW7 1537 aa21.72■■□□□ 1.07
SIPA1-209ENST00000534313 FAM69CQ0P6D2 419 aa21.72■■□□□ 1.07
SIPA1-209ENST00000534313 NFE2L2Q16236 605 aa21.72■■□□□ 1.07
SIPA1-209ENST00000534313 ALKQ9UM73 1620 aa21.72■■□□□ 1.07
SIPA1-209ENST00000534313 VAMP4O75379 141 aa21.72■■□□□ 1.07
SIPA1-209ENST00000534313 CHD1LQ86WJ1 897 aa21.72■■□□□ 1.07
SIPA1-209ENST00000534313 ARHGEF40Q8TER5 1519 aa21.72■■□□□ 1.07
SIPA1-209ENST00000534313 NUCB1Q02818 461 aa21.71■■□□□ 1.07
SIPA1-209ENST00000534313 NUTM2FA1L443 756 aa21.71■■□□□ 1.07
SIPA1-209ENST00000534313 MBIPQ9NS73 344 aa21.71■■□□□ 1.07
SIPA1-209ENST00000534313 PREX1Q8TCU6 1659 aa21.7■■□□□ 1.06
SIPA1-209ENST00000534313 ALDH1L2Q3SY69 923 aa21.7■■□□□ 1.06
SIPA1-209ENST00000534313 FOXD4L1Q9NU39 408 aa21.7■■□□□ 1.06
SIPA1-209ENST00000534313 MRPL50Q8N5N7 158 aaKnown RBP21.69■■□□□ 1.06
SIPA1-209ENST00000534313 ZMYM3Q14202 1370 aa21.69■■□□□ 1.06
SIPA1-209ENST00000534313 ZBTB7BO15156 539 aaPredicted RBP21.68■■□□□ 1.06
SIPA1-209ENST00000534313 HSCBQ8IWL3 235 aa21.68■■□□□ 1.06
SIPA1-209ENST00000534313 C8orf58Q8NAV2 365 aa21.68■■□□□ 1.06
SIPA1-209ENST00000534313 RICTORQ6R327 1708 aa21.68■■□□□ 1.06
SIPA1-209ENST00000534313 SOX12O15370 315 aa21.68■■□□□ 1.06
SIPA1-209ENST00000534313 FAM135BQ49AJ0 1406 aa21.67■■□□□ 1.06
SIPA1-209ENST00000534313 IL13P35225 146 aa21.67■■□□□ 1.06
SIPA1-209ENST00000534313 TWISTNBQ3B726 338 aaPredicted RBP21.67■■□□□ 1.06
SIPA1-209ENST00000534313 MCM4P33991 863 aa21.66■■□□□ 1.06
SIPA1-209ENST00000534313 MED14O60244 1454 aa21.66■■□□□ 1.06
SIPA1-209ENST00000534313 KRT24Q2M2I5 525 aa21.66■■□□□ 1.06
SIPA1-209ENST00000534313 PPIP5K1Q6PFW1 1433 aa21.65■■□□□ 1.06
SIPA1-209ENST00000534313 WASLO00401 505 aaPredicted RBP21.64■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms