RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 ANKRD50Q9ULJ7 1429 aa9.09□□□□□ -0.95
CMTM1-220ENST00000534143 LAPTM4BQ86VI4 370 aa9.09□□□□□ -0.95
CMTM1-220ENST00000534143 NPDC1Q9NQX5 325 aaPredicted RBP9.09□□□□□ -0.95
CMTM1-220ENST00000534143 DUOX2Q9NRD8 1548 aa9.09□□□□□ -0.95
CMTM1-220ENST00000534143 PACS2Q86VP3 889 aa9.08□□□□□ -0.96
CMTM1-220ENST00000534143 WNT2BQ93097 391 aa9.08□□□□□ -0.96
CMTM1-220ENST00000534143 MAGI2Q86UL8 1455 aa9.08□□□□□ -0.96
CMTM1-220ENST00000534143 ACIN1Q9UKV3 1341 aaKnown RBP9.07□□□□□ -0.96
CMTM1-220ENST00000534143 ABCA6Q8N139 1617 aa9.07□□□□□ -0.96
CMTM1-220ENST00000534143 TESPA1A2RU30 521 aaPredicted RBP9.07□□□□□ -0.96
CMTM1-220ENST00000534143 DHX29Q7Z478 1369 aaKnown RBP9.07□□□□□ -0.96
CMTM1-220ENST00000534143 YEATS2Q9ULM3 1422 aa9.06□□□□□ -0.96
CMTM1-220ENST00000534143 RBM27Q9P2N5 1060 aaKnown RBP9.06□□□□□ -0.96
CMTM1-220ENST00000534143 FAM198AQ9UFP1 575 aa9.06□□□□□ -0.96
CMTM1-220ENST00000534143 DIP2CQ9Y2E4 1556 aa9.06□□□□□ -0.96
CMTM1-220ENST00000534143 ERBINQ96RT1 1412 aa9.05□□□□□ -0.96
CMTM1-220ENST00000534143 A2MP01023 1474 aa9.05□□□□□ -0.96
CMTM1-220ENST00000534143 DHX57Q6P158 1386 aaKnown RBP9.05□□□□□ -0.96
CMTM1-220ENST00000534143 THSD4Q6ZMP0 1018 aa9.05□□□□□ -0.96
CMTM1-220ENST00000534143 SEPT9Q9UHD8 586 aaPredicted RBP9.05□□□□□ -0.96
CMTM1-220ENST00000534143 FAM98CQ17RN3 349 aaKnown RBP9.04□□□□□ -0.96
CMTM1-220ENST00000534143 SMYD5Q6GMV2 418 aa9.04□□□□□ -0.96
CMTM1-220ENST00000534143 TTC13Q8NBP0 860 aa9.04□□□□□ -0.96
CMTM1-220ENST00000534143 ZFRQ96KR1 1074 aaKnown RBP9.04□□□□□ -0.96
CMTM1-220ENST00000534143 BCORL1Q5H9F3 1711 aa9.04□□□□□ -0.96
CMTM1-220ENST00000534143 EIF2AK4Q9P2K8 1649 aaKnown RBP9.04□□□□□ -0.96
CMTM1-220ENST00000534143 UNC13BO14795 1591 aa9.03□□□□□ -0.96
CMTM1-220ENST00000534143 REREQ9P2R6 1566 aa9.03□□□□□ -0.96
CMTM1-220ENST00000534143 ATP10AO60312 1499 aa9.03□□□□□ -0.96
CMTM1-220ENST00000534143 KDM5DQ9BY66 1539 aa9.03□□□□□ -0.96
CMTM1-220ENST00000534143 DEPDC5O75140 1603 aa9.02□□□□□ -0.96
CMTM1-220ENST00000534143 PTPN5P54829 565 aa9.02□□□□□ -0.97
CMTM1-220ENST00000534143 PTGDRQ13258 359 aa9.02□□□□□ -0.97
CMTM1-220ENST00000534143 ANKK1Q8NFD2 765 aa9.02□□□□□ -0.97
CMTM1-220ENST00000534143 TATDN2Q93075 761 aa9.02□□□□□ -0.97
CMTM1-220ENST00000534143 TRIM52Q96A61 297 aa9.02□□□□□ -0.97
CMTM1-220ENST00000534143 PZPP20742 1482 aa9.02□□□□□ -0.97
CMTM1-220ENST00000534143 ARHGEF40Q8TER5 1519 aa9.01□□□□□ -0.97
CMTM1-220ENST00000534143 ADAMTSL3P82987 1691 aa9.01□□□□□ -0.97
CMTM1-220ENST00000534143 NUTM2FA1L443 756 aa9.01□□□□□ -0.97
CMTM1-220ENST00000534143 NBPF26B4DH59 902 aa9.01□□□□□ -0.97
CMTM1-220ENST00000534143 KIF3BO15066 747 aa9.01□□□□□ -0.97
CMTM1-220ENST00000534143 PADI6Q6TGC4 694 aa9.01□□□□□ -0.97
CMTM1-220ENST00000534143 CCER1Q8TC90 406 aaPredicted RBP9.01□□□□□ -0.97
CMTM1-220ENST00000534143 MPHOSPH9Q99550 1183 aa9.01□□□□□ -0.97
CMTM1-220ENST00000534143 PNMA3Q9UL41 463 aa9.01□□□□□ -0.97
CMTM1-220ENST00000534143 MROH1Q8NDA8 1641 aa9.01□□□□□ -0.97
CMTM1-220ENST00000534143 AGLP35573 1532 aa9□□□□□ -0.97
CMTM1-220ENST00000534143 NUP155O75694 1391 aa9□□□□□ -0.97
CMTM1-220ENST00000534143 SIGLEC1Q9BZZ2 1709 aa9□□□□□ -0.97
CMTM1-220ENST00000534143 SOWAHBA6NEL2 793 aa9□□□□□ -0.97
CMTM1-220ENST00000534143 C3orf80F5H4A9 247 aa9□□□□□ -0.97
CMTM1-220ENST00000534143 SMAPO00193 183 aa9□□□□□ -0.97
CMTM1-220ENST00000534143 MYT1Q01538 1121 aa9□□□□□ -0.97
CMTM1-220ENST00000534143 MADDQ8WXG6 1647 aa9□□□□□ -0.97
CMTM1-220ENST00000534143 RNF17Q9BXT8 1623 aaKnown RBP9□□□□□ -0.97
CMTM1-220ENST00000534143 CLSPNQ9HAW4 1339 aa9□□□□□ -0.97
CMTM1-220ENST00000534143 VWDEQ8N2E2 1590 aa8.99□□□□□ -0.97
CMTM1-220ENST00000534143 IQGAP3Q86VI3 1631 aa8.99□□□□□ -0.97
CMTM1-220ENST00000534143 NUDT18Q6ZVK8 323 aa8.99□□□□□ -0.97
CMTM1-220ENST00000534143 RIMS1Q86UR5 1692 aaKnown RBP8.99□□□□□ -0.97
CMTM1-220ENST00000534143 RBM26Q5T8P6 1007 aaKnown RBP8.98□□□□□ -0.97
CMTM1-220ENST00000534143 PRDM15P57071 1507 aaPredicted RBP8.98□□□□□ -0.97
CMTM1-220ENST00000534143 FAM135AQ9P2D6 1515 aa8.98□□□□□ -0.97
CMTM1-220ENST00000534143 FCHSD2O94868 740 aa8.97□□□□□ -0.97
CMTM1-220ENST00000534143 BCAMP50895 628 aa8.97□□□□□ -0.97
CMTM1-220ENST00000534143 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.96□□□□□ -0.98
CMTM1-220ENST00000534143 PTPRMP28827 1452 aa8.96□□□□□ -0.98
CMTM1-220ENST00000534143 LMTK2Q8IWU2 1503 aa8.95□□□□□ -0.98
CMTM1-220ENST00000534143 TET3O43151 1660 aa8.95□□□□□ -0.98
CMTM1-220ENST00000534143 CEP152O94986 1710 aa8.95□□□□□ -0.98
CMTM1-220ENST00000534143 GGT6Q6P531 493 aa8.95□□□□□ -0.98
CMTM1-220ENST00000534143 LRCH3Q96II8 777 aa8.95□□□□□ -0.98
CMTM1-220ENST00000534143 KANK1Q14678 1352 aa8.95□□□□□ -0.98
CMTM1-220ENST00000534143 ANKRD30BQ9BXX2 1392 aa8.95□□□□□ -0.98
CMTM1-220ENST00000534143 FER1L4A9Z1Z3 1794 aa8.94□□□□□ -0.98
CMTM1-220ENST00000534143 EYA1Q99502 592 aa8.94□□□□□ -0.98
CMTM1-220ENST00000534143 PLA2G2EQ9NZK7 142 aa8.94□□□□□ -0.98
CMTM1-220ENST00000534143 E9PCH4 1651 aa8.94□□□□□ -0.98
CMTM1-220ENST00000534143 HIC1Q14526 733 aa8.93□□□□□ -0.98
CMTM1-220ENST00000534143 SAMD7Q7Z3H4 446 aa8.93□□□□□ -0.98
CMTM1-220ENST00000534143 TSR3Q9UJK0 312 aaKnown RBP8.93□□□□□ -0.98
CMTM1-220ENST00000534143 ABCC3O15438 1527 aa8.93□□□□□ -0.98
CMTM1-220ENST00000534143 ZC3H13Q5T200 1668 aaKnown RBP8.92□□□□□ -0.98
CMTM1-220ENST00000534143 ARID4BQ4LE39 1312 aaPredicted RBP8.92□□□□□ -0.98
CMTM1-220ENST00000534143 NYAP1Q6ZVC0 841 aa8.92□□□□□ -0.98
CMTM1-220ENST00000534143 SIN3AQ96ST3 1273 aa8.92□□□□□ -0.98
CMTM1-220ENST00000534143 WBP1LQ9NX94 342 aa8.92□□□□□ -0.98
CMTM1-220ENST00000534143 EFCAB6Q5THR3 1501 aa8.91□□□□□ -0.98
CMTM1-220ENST00000534143 PLA2R1Q13018 1463 aa8.91□□□□□ -0.98
CMTM1-220ENST00000534143 WASHC2CQ9Y4E1 1318 aa8.91□□□□□ -0.98
CMTM1-220ENST00000534143 ZEB1P37275 1124 aaPredicted RBP8.91□□□□□ -0.98
CMTM1-220ENST00000534143 HDGFP51858 240 aaKnown RBP8.91□□□□□ -0.98
CMTM1-220ENST00000534143 HPS5Q9UPZ3 1129 aa8.91□□□□□ -0.98
CMTM1-220ENST00000534143 ADGRG1Q9Y653 693 aa8.91□□□□□ -0.98
CMTM1-220ENST00000534143 CAMSAP1Q5T5Y3 1602 aa8.91□□□□□ -0.98
CMTM1-220ENST00000534143 PTPRTO14522 1441 aa8.9□□□□□ -0.98
CMTM1-220ENST00000534143 ARHGAP31Q2M1Z3 1444 aa8.9□□□□□ -0.98
CMTM1-220ENST00000534143 GPR37O15354 613 aa8.9□□□□□ -0.98
CMTM1-220ENST00000534143 CFAP65Q6ZU64 1925 aaKnown RBP8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms