RNA–Protein interactions for RNA: ENST00000534131.1

CTSC-209, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-209ENST00000534131 C11orf95C9JLR9 678 aaPredicted RBP16.28■□□□□ 0.2
CTSC-209ENST00000534131 KRT28Q7Z3Y7 464 aa16.28■□□□□ 0.2
CTSC-209ENST00000534131 POLR3AO14802 1390 aaPredicted RBP16.27■□□□□ 0.2
CTSC-209ENST00000534131 BRD4O60885 1362 aaPredicted RBP16.27■□□□□ 0.2
CTSC-209ENST00000534131 SOCS7O14512 581 aa16.27■□□□□ 0.2
CTSC-209ENST00000534131 MON2Q7Z3U7 1717 aa16.27■□□□□ 0.19
CTSC-209ENST00000534131 KTN1Q86UP2 1357 aaKnown RBP16.26■□□□□ 0.19
CTSC-209ENST00000534131 WASHC2AQ641Q2 1341 aa16.25■□□□□ 0.19
CTSC-209ENST00000534131 PAK3O75914 559 aaPredicted RBP16.25■□□□□ 0.19
CTSC-209ENST00000534131 ANKRD36BQ8N2N9 1353 aa16.25■□□□□ 0.19
CTSC-209ENST00000534131 LRRC59Q96AG4 307 aaKnown RBP16.24■□□□□ 0.19
CTSC-209ENST00000534131 CPSF1Q10570 1443 aaKnown RBP16.23■□□□□ 0.19
CTSC-209ENST00000534131 SOS2Q07890 1332 aaPredicted RBP16.22■□□□□ 0.19
CTSC-209ENST00000534131 USP6P35125 1406 aa16.22■□□□□ 0.19
CTSC-209ENST00000534131 XPCQ01831 940 aaPredicted RBP16.22■□□□□ 0.19
CTSC-209ENST00000534131 LMOD2Q6P5Q4 547 aa16.22■□□□□ 0.19
CTSC-209ENST00000534131 DDX17Q92841 729 aaKnown RBP16.22■□□□□ 0.19
CTSC-209ENST00000534131 A0A1W2PP64 1363 aa16.22■□□□□ 0.19
CTSC-209ENST00000534131 SBNO1A3KN83 1393 aa16.22■□□□□ 0.19
CTSC-209ENST00000534131 TRPM3Q9HCF6 1732 aaPredicted RBP16.22■□□□□ 0.19
CTSC-209ENST00000534131 PANK3Q9H999 370 aa16.21■□□□□ 0.19
CTSC-209ENST00000534131 PXDNQ92626 1479 aa16.21■□□□□ 0.19
CTSC-209ENST00000534131 TTC21AQ8NDW8 1320 aa16.2■□□□□ 0.18
CTSC-209ENST00000534131 EDC4Q6P2E9 1401 aaKnown RBP16.2■□□□□ 0.18
CTSC-209ENST00000534131 COL16A1Q07092 1604 aaPredicted RBP16.2■□□□□ 0.18
CTSC-209ENST00000534131 KIF20BQ96Q89 1820 aa16.2■□□□□ 0.18
CTSC-209ENST00000534131 CD163L1Q9NR16 1453 aa16.2■□□□□ 0.18
CTSC-209ENST00000534131 ARHGEF10O15013 1369 aa16.19■□□□□ 0.18
CTSC-209ENST00000534131 KNSTRNQ9Y448 316 aa16.19■□□□□ 0.18
CTSC-209ENST00000534131 TNS3Q68CZ2 1445 aa16.19■□□□□ 0.18
CTSC-209ENST00000534131 NRKQ7Z2Y5 1582 aa16.18■□□□□ 0.18
CTSC-209ENST00000534131 ABTB2Q8N961 1025 aa16.18■□□□□ 0.18
CTSC-209ENST00000534131 SPATA31A3Q5VYP0 1347 aa16.18■□□□□ 0.18
CTSC-209ENST00000534131 TTC21BQ7Z4L5 1316 aa16.18■□□□□ 0.18
CTSC-209ENST00000534131 ALS2Q96Q42 1657 aa16.18■□□□□ 0.18
CTSC-209ENST00000534131 JCADQ9P266 1359 aa16.17■□□□□ 0.18
CTSC-209ENST00000534131 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.17■□□□□ 0.18
CTSC-209ENST00000534131 NSD3Q9BZ95 1437 aa16.17■□□□□ 0.18
CTSC-209ENST00000534131 SHPRHQ149N8 1683 aa16.16■□□□□ 0.18
CTSC-209ENST00000534131 NLRP13Q86W25 1043 aa16.16■□□□□ 0.18
CTSC-209ENST00000534131 HAP1P54257 671 aaPredicted RBP16.15■□□□□ 0.18
CTSC-209ENST00000534131 NLRP6P59044 892 aa16.15■□□□□ 0.18
CTSC-209ENST00000534131 DDX10Q13206 875 aaKnown RBP16.15■□□□□ 0.18
CTSC-209ENST00000534131 RGS17Q9UGC6 210 aaPredicted RBP16.15■□□□□ 0.18
CTSC-209ENST00000534131 CGNL1Q0VF96 1302 aa16.15■□□□□ 0.18
CTSC-209ENST00000534131 ANKRD26Q9UPS8 1709 aa16.14■□□□□ 0.17
CTSC-209ENST00000534131 SSH2Q76I76 1423 aa16.13■□□□□ 0.17
CTSC-209ENST00000534131 CARD14Q9BXL6 1004 aa16.13■□□□□ 0.17
CTSC-209ENST00000534131 PIK3C2AO00443 1686 aa16.13■□□□□ 0.17
CTSC-209ENST00000534131 COL22A1Q8NFW1 1626 aaPredicted RBP16.12■□□□□ 0.17
CTSC-209ENST00000534131 COG3Q96JB2 828 aa16.12■□□□□ 0.17
CTSC-209ENST00000534131 NUTM2GQ5VZR2 741 aa16.11■□□□□ 0.17
CTSC-209ENST00000534131 USP54Q70EL1 1684 aa16.11■□□□□ 0.17
CTSC-209ENST00000534131 NSD2O96028 1365 aa16.11■□□□□ 0.17
CTSC-209ENST00000534131 PNPLA6Q8IY17 1366 aa16.11■□□□□ 0.17
CTSC-209ENST00000534131 PLEKHG5O94827 1062 aa16.1■□□□□ 0.17
CTSC-209ENST00000534131 MEX3CQ5U5Q3 659 aaKnown RBP16.1■□□□□ 0.17
CTSC-209ENST00000534131 NME9Q86XW9 330 aa16.1■□□□□ 0.17
CTSC-209ENST00000534131 KCNH5Q8NCM2 988 aa16.1■□□□□ 0.17
CTSC-209ENST00000534131 SPATA31A6Q5VVP1 1343 aa16.1■□□□□ 0.17
CTSC-209ENST00000534131 FYB1O15117 783 aa16.09■□□□□ 0.17
CTSC-209ENST00000534131 USP31Q70CQ4 1352 aa16.09■□□□□ 0.17
CTSC-209ENST00000534131 PHRF1Q9P1Y6 1649 aaKnown RBP16.08■□□□□ 0.17
CTSC-209ENST00000534131 MARF1Q9Y4F3 1742 aaKnown RBP16.08■□□□□ 0.17
CTSC-209ENST00000534131 NUTM2BA6NNL0 878 aaPredicted RBP16.08■□□□□ 0.16
CTSC-209ENST00000534131 NUTM2EB1AL46 878 aaPredicted RBP16.08■□□□□ 0.16
CTSC-209ENST00000534131 POTEAQ6S8J7 498 aa16.08■□□□□ 0.16
CTSC-209ENST00000534131 NUTM2AQ8IVF1 878 aaPredicted RBP16.08■□□□□ 0.16
CTSC-209ENST00000534131 GGNBP2Q9H3C7 697 aa16.08■□□□□ 0.16
CTSC-209ENST00000534131 ABCA3Q99758 1704 aa16.08■□□□□ 0.16
CTSC-209ENST00000534131 PER1O15534 1290 aaPredicted RBP16.07■□□□□ 0.16
CTSC-209ENST00000534131 MYCNP04198 464 aaPredicted RBP16.07■□□□□ 0.16
CTSC-209ENST00000534131 MAP2P11137 1827 aaKnown RBP16.07■□□□□ 0.16
CTSC-209ENST00000534131 CRYBG1Q9Y4K1 1723 aa16.06■□□□□ 0.16
CTSC-209ENST00000534131 LRP6O75581 1613 aa16.06■□□□□ 0.16
CTSC-209ENST00000534131 MORC1Q86VD1 984 aa16.06■□□□□ 0.16
CTSC-209ENST00000534131 NPC1L1Q9UHC9 1359 aa16.05■□□□□ 0.16
CTSC-209ENST00000534131 USP19O94966 1318 aa16.04■□□□□ 0.16
CTSC-209ENST00000534131 GCP02774 474 aa16.04■□□□□ 0.16
CTSC-209ENST00000534131 CC2D1BQ5T0F9 858 aaKnown RBP16.04■□□□□ 0.16
CTSC-209ENST00000534131 CABLES1Q8TDN4 633 aa16.04■□□□□ 0.16
CTSC-209ENST00000534131 ZRANB1Q9UGI0 708 aa16.04■□□□□ 0.16
CTSC-209ENST00000534131 LTN1O94822 1766 aa16.04■□□□□ 0.16
CTSC-209ENST00000534131 SLIT3O75094 1523 aa16.04■□□□□ 0.16
CTSC-209ENST00000534131 OVOS2A0A0J9YW53 1432 aa16.03■□□□□ 0.16
CTSC-209ENST00000534131 OVOS2Q6IE36 1432 aa16.03■□□□□ 0.16
CTSC-209ENST00000534131 SOX12O15370 315 aa16.03■□□□□ 0.16
CTSC-209ENST00000534131 CNGB1Q14028 1251 aaPredicted RBP16.03■□□□□ 0.16
CTSC-209ENST00000534131 AMER1Q5JTC6 1135 aaPredicted RBP16.03■□□□□ 0.16
CTSC-209ENST00000534131 ZBTB7CA1YPR0 619 aa16.01■□□□□ 0.15
CTSC-209ENST00000534131 ZC3H6P61129 1189 aaKnown RBP16■□□□□ 0.15
CTSC-209ENST00000534131 ADAMTS2O95450 1211 aa15.99■□□□□ 0.15
CTSC-209ENST00000534131 ZNF772Q68DY9 489 aaPredicted RBP15.99■□□□□ 0.15
CTSC-209ENST00000534131 PRDM11Q9NQV5 511 aa15.99■□□□□ 0.15
CTSC-209ENST00000534131 COL14A1Q05707 1796 aaKnown RBP15.99■□□□□ 0.15
CTSC-209ENST00000534131 ANP32CO43423 234 aa15.98■□□□□ 0.15
CTSC-209ENST00000534131 TNNT2P45379 298 aaPredicted RBP15.98■□□□□ 0.15
CTSC-209ENST00000534131 RALBP1Q15311 655 aa15.98■□□□□ 0.15
CTSC-209ENST00000534131 U3KPZ7 1027 aaPredicted RBP15.98■□□□□ 0.15
CTSC-209ENST00000534131 RGPD5Q99666 1765 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 172.7 ms