RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 MON2Q7Z3U7 1717 aa16.36■□□□□ 0.21
COMMD9-208ENST00000533643 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.36■□□□□ 0.21
COMMD9-208ENST00000533643 KNSTRNQ9Y448 316 aa16.36■□□□□ 0.21
COMMD9-208ENST00000533643 SBNO1A3KN83 1393 aa16.36■□□□□ 0.21
COMMD9-208ENST00000533643 PAK3O75914 559 aaPredicted RBP16.35■□□□□ 0.21
COMMD9-208ENST00000533643 AMER1Q5JTC6 1135 aaPredicted RBP16.34■□□□□ 0.21
COMMD9-208ENST00000533643 TTC21AQ8NDW8 1320 aa16.34■□□□□ 0.21
COMMD9-208ENST00000533643 NRKQ7Z2Y5 1582 aa16.34■□□□□ 0.21
COMMD9-208ENST00000533643 TRPM3Q9HCF6 1732 aaPredicted RBP16.33■□□□□ 0.21
COMMD9-208ENST00000533643 FYB1O15117 783 aa16.33■□□□□ 0.2
COMMD9-208ENST00000533643 NME9Q86XW9 330 aa16.33■□□□□ 0.2
COMMD9-208ENST00000533643 CGNL1Q0VF96 1302 aa16.33■□□□□ 0.2
COMMD9-208ENST00000533643 SPATA31A3Q5VYP0 1347 aa16.33■□□□□ 0.2
COMMD9-208ENST00000533643 ZRANB1Q9UGI0 708 aa16.32■□□□□ 0.2
COMMD9-208ENST00000533643 TNS3Q68CZ2 1445 aa16.31■□□□□ 0.2
COMMD9-208ENST00000533643 ABTB2Q8N961 1025 aa16.31■□□□□ 0.2
COMMD9-208ENST00000533643 HSPA1LP34931 641 aa16.3■□□□□ 0.2
COMMD9-208ENST00000533643 NUTM2GQ5VZR2 741 aa16.3■□□□□ 0.2
COMMD9-208ENST00000533643 LMOD2Q6P5Q4 547 aa16.3■□□□□ 0.2
COMMD9-208ENST00000533643 FBXO41Q8TF61 875 aa16.3■□□□□ 0.2
COMMD9-208ENST00000533643 LRRC59Q96AG4 307 aaKnown RBP16.3■□□□□ 0.2
COMMD9-208ENST00000533643 GGNBP2Q9H3C7 697 aa16.3■□□□□ 0.2
COMMD9-208ENST00000533643 PHLPP1O60346 1717 aa16.3■□□□□ 0.2
COMMD9-208ENST00000533643 NPC1L1Q9UHC9 1359 aa16.29■□□□□ 0.2
COMMD9-208ENST00000533643 COL16A1Q07092 1604 aaPredicted RBP16.29■□□□□ 0.2
COMMD9-208ENST00000533643 USP31Q70CQ4 1352 aa16.28■□□□□ 0.2
COMMD9-208ENST00000533643 PIK3C2AO00443 1686 aa16.28■□□□□ 0.2
COMMD9-208ENST00000533643 NLRP6P59044 892 aa16.28■□□□□ 0.2
COMMD9-208ENST00000533643 CC2D1BQ5T0F9 858 aaKnown RBP16.28■□□□□ 0.2
COMMD9-208ENST00000533643 ALS2Q96Q42 1657 aa16.27■□□□□ 0.2
COMMD9-208ENST00000533643 ARHGEF10O15013 1369 aa16.27■□□□□ 0.2
COMMD9-208ENST00000533643 NSD2O96028 1365 aa16.27■□□□□ 0.2
COMMD9-208ENST00000533643 CNGB1Q14028 1251 aaPredicted RBP16.27■□□□□ 0.2
COMMD9-208ENST00000533643 NLRP13Q86W25 1043 aa16.26■□□□□ 0.19
COMMD9-208ENST00000533643 COG3Q96JB2 828 aa16.26■□□□□ 0.19
COMMD9-208ENST00000533643 OVOS2A0A0J9YW53 1432 aa16.26■□□□□ 0.19
COMMD9-208ENST00000533643 OVOS2Q6IE36 1432 aa16.26■□□□□ 0.19
COMMD9-208ENST00000533643 PNPLA6Q8IY17 1366 aa16.25■□□□□ 0.19
COMMD9-208ENST00000533643 KIF20BQ96Q89 1820 aa16.24■□□□□ 0.19
COMMD9-208ENST00000533643 USP19O94966 1318 aa16.24■□□□□ 0.19
COMMD9-208ENST00000533643 DIEXFQ68CQ4 756 aaKnown RBP16.24■□□□□ 0.19
COMMD9-208ENST00000533643 MORC1Q86VD1 984 aa16.24■□□□□ 0.19
COMMD9-208ENST00000533643 PLEKHG5O94827 1062 aa16.23■□□□□ 0.19
COMMD9-208ENST00000533643 CABLES1Q8TDN4 633 aa16.23■□□□□ 0.19
COMMD9-208ENST00000533643 JCADQ9P266 1359 aa16.22■□□□□ 0.19
COMMD9-208ENST00000533643 MED1Q15648 1581 aaPredicted RBP16.21■□□□□ 0.19
COMMD9-208ENST00000533643 USP54Q70EL1 1684 aa16.21■□□□□ 0.19
COMMD9-208ENST00000533643 TNNT2P45379 298 aaPredicted RBP16.21■□□□□ 0.19
COMMD9-208ENST00000533643 MARF1Q9Y4F3 1742 aaKnown RBP16.21■□□□□ 0.19
COMMD9-208ENST00000533643 GCP02774 474 aa16.2■□□□□ 0.18
COMMD9-208ENST00000533643 FBLN1P23142 703 aa16.2■□□□□ 0.18
COMMD9-208ENST00000533643 PRKRIP1Q9H875 184 aaPredicted RBP16.2■□□□□ 0.18
COMMD9-208ENST00000533643 PARD3Q8TEW0 1356 aa16.2■□□□□ 0.18
COMMD9-208ENST00000533643 SLIT3O75094 1523 aa16.19■□□□□ 0.18
COMMD9-208ENST00000533643 SOX12O15370 315 aa16.19■□□□□ 0.18
COMMD9-208ENST00000533643 RALBP1Q15311 655 aa16.19■□□□□ 0.18
COMMD9-208ENST00000533643 ANKRD26Q9UPS8 1709 aa16.19■□□□□ 0.18
COMMD9-208ENST00000533643 COL22A1Q8NFW1 1626 aaPredicted RBP16.19■□□□□ 0.18
COMMD9-208ENST00000533643 ANP32CO43423 234 aa16.18■□□□□ 0.18
COMMD9-208ENST00000533643 KCNH5Q8NCM2 988 aa16.18■□□□□ 0.18
COMMD9-208ENST00000533643 NFAT5O94916 1531 aa16.17■□□□□ 0.18
COMMD9-208ENST00000533643 SHPRHQ149N8 1683 aa16.17■□□□□ 0.18
COMMD9-208ENST00000533643 CRYBG1Q9Y4K1 1723 aa16.16■□□□□ 0.18
COMMD9-208ENST00000533643 AATKQ6ZMQ8 1374 aa16.16■□□□□ 0.18
COMMD9-208ENST00000533643 NUTM2BA6NNL0 878 aaPredicted RBP16.15■□□□□ 0.18
COMMD9-208ENST00000533643 NUTM2EB1AL46 878 aaPredicted RBP16.15■□□□□ 0.18
COMMD9-208ENST00000533643 PPP2R1AP30153 589 aa16.15■□□□□ 0.18
COMMD9-208ENST00000533643 HAP1P54257 671 aaPredicted RBP16.15■□□□□ 0.18
COMMD9-208ENST00000533643 ZC3H6P61129 1189 aaKnown RBP16.15■□□□□ 0.18
COMMD9-208ENST00000533643 RRS1Q15050 365 aaKnown RBP16.15■□□□□ 0.18
COMMD9-208ENST00000533643 NUTM2AQ8IVF1 878 aaPredicted RBP16.15■□□□□ 0.18
COMMD9-208ENST00000533643 PHRF1Q9P1Y6 1649 aaKnown RBP16.15■□□□□ 0.18
COMMD9-208ENST00000533643 ARHGEF25Q86VW2 580 aa16.14■□□□□ 0.17
COMMD9-208ENST00000533643 POLKQ9UBT6 870 aa16.14■□□□□ 0.17
COMMD9-208ENST00000533643 SPATA31A6Q5VVP1 1343 aa16.14■□□□□ 0.17
COMMD9-208ENST00000533643 ABCA3Q99758 1704 aa16.14■□□□□ 0.17
COMMD9-208ENST00000533643 EMILIN1Q9Y6C2 1016 aa16.13■□□□□ 0.17
COMMD9-208ENST00000533643 MAP3K19Q56UN5 1328 aa16.13■□□□□ 0.17
COMMD9-208ENST00000533643 KIAA0232Q92628 1395 aa16.13■□□□□ 0.17
COMMD9-208ENST00000533643 MYBBP1AQ9BQG0 1328 aaKnown RBP16.12■□□□□ 0.17
COMMD9-208ENST00000533643 CPDO75976 1380 aa16.12■□□□□ 0.17
COMMD9-208ENST00000533643 ZBTB7CA1YPR0 619 aa16.11■□□□□ 0.17
COMMD9-208ENST00000533643 ADAMTS2O95450 1211 aa16.11■□□□□ 0.17
COMMD9-208ENST00000533643 MTHFSP49914 203 aa16.11■□□□□ 0.17
COMMD9-208ENST00000533643 FAM83GA6ND36 823 aa16.1■□□□□ 0.17
COMMD9-208ENST00000533643 CHRNA2Q15822 529 aa16.1■□□□□ 0.17
COMMD9-208ENST00000533643 SMG6Q86US8 1419 aaKnown RBP16.1■□□□□ 0.17
COMMD9-208ENST00000533643 LRP6O75581 1613 aa16.09■□□□□ 0.17
COMMD9-208ENST00000533643 PPM1GO15355 546 aaPredicted RBP16.09■□□□□ 0.17
COMMD9-208ENST00000533643 AMPHP49418 695 aa16.09■□□□□ 0.17
COMMD9-208ENST00000533643 ILDR1Q86SU0 546 aaPredicted RBP16.09■□□□□ 0.17
COMMD9-208ENST00000533643 MIER1Q8N108 512 aa16.09■□□□□ 0.17
COMMD9-208ENST00000533643 IP6K1Q92551 441 aa16.09■□□□□ 0.17
COMMD9-208ENST00000533643 PRDM11Q9NQV5 511 aa16.09■□□□□ 0.17
COMMD9-208ENST00000533643 HOXC9P31274 260 aa16.08■□□□□ 0.16
COMMD9-208ENST00000533643 AXIN2Q9Y2T1 843 aa16.07■□□□□ 0.16
COMMD9-208ENST00000533643 RTL1A6NKG5 1358 aa16.07■□□□□ 0.16
COMMD9-208ENST00000533643 FLT4P35916 1363 aa16.07■□□□□ 0.16
COMMD9-208ENST00000533643 KIF24Q5T7B8 1368 aa16.07■□□□□ 0.16
COMMD9-208ENST00000533643 PEAK1Q9H792 1746 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms