RNA–Protein interactions for RNA: ENST00000533408.1

PTP4A2-215, Transcript of protein tyrosine phosphatase type IVA, member 2, human

TSL 3

Gene PTP4A2, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTP4A2-215	ENST00000533408	ARHGEF10	O15013	1369 aa		28.9	■■■□□ 2.22
PTP4A2-215	ENST00000533408	DDX17	Q92841	729 aa	Known RBP	28.9	■■■□□ 2.22
PTP4A2-215	ENST00000533408	PXDN	Q92626	1479 aa		28.9	■■■□□ 2.22
PTP4A2-215	ENST00000533408	AKAP12	Q02952	1782 aa		28.89	■■■□□ 2.22
PTP4A2-215	ENST00000533408	ABTB2	Q8N961	1025 aa		28.89	■■■□□ 2.22
PTP4A2-215	ENST00000533408	CARD14	Q9BXL6	1004 aa		28.89	■■■□□ 2.22
PTP4A2-215	ENST00000533408	SPATA31A3	Q5VYP0	1347 aa		28.89	■■■□□ 2.21
PTP4A2-215	ENST00000533408	SSH2	Q76I76	1423 aa		28.88	■■■□□ 2.21
PTP4A2-215	ENST00000533408	NSD3	Q9BZ95	1437 aa		28.87	■■■□□ 2.21
PTP4A2-215	ENST00000533408	LMOD2	Q6P5Q4	547 aa		28.87	■■■□□ 2.21
PTP4A2-215	ENST00000533408	NLRP13	Q86W25	1043 aa		28.87	■■■□□ 2.21
PTP4A2-215	ENST00000533408	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	28.87	■■■□□ 2.21
PTP4A2-215	ENST00000533408	MON2	Q7Z3U7	1717 aa		28.86	■■■□□ 2.21
PTP4A2-215	ENST00000533408	TNS3	Q68CZ2	1445 aa		28.86	■■■□□ 2.21
PTP4A2-215	ENST00000533408	PER1	O15534	1290 aa	Predicted RBP	28.85	■■■□□ 2.21
PTP4A2-215	ENST00000533408	PHLPP1	O60346	1717 aa		28.84	■■■□□ 2.21
PTP4A2-215	ENST00000533408	NSD2	O96028	1365 aa		28.84	■■■□□ 2.21
PTP4A2-215	ENST00000533408	NLRP6	P59044	892 aa		28.82	■■■□□ 2.2
PTP4A2-215	ENST00000533408	NPC1L1	Q9UHC9	1359 aa		28.81	■■■□□ 2.2
PTP4A2-215	ENST00000533408	HSPA1L	P34931	641 aa		28.81	■■■□□ 2.2
PTP4A2-215	ENST00000533408	COG3	Q96JB2	828 aa		28.81	■■■□□ 2.2
PTP4A2-215	ENST00000533408	FYB1	O15117	783 aa		28.8	■■■□□ 2.2
PTP4A2-215	ENST00000533408	USP31	Q70CQ4	1352 aa		28.78	■■■□□ 2.2
PTP4A2-215	ENST00000533408	JCAD	Q9P266	1359 aa		28.78	■■■□□ 2.2
PTP4A2-215	ENST00000533408	TRPM3	Q9HCF6	1732 aa	Predicted RBP	28.77	■■■□□ 2.2
PTP4A2-215	ENST00000533408	NME9	Q86XW9	330 aa		28.77	■■■□□ 2.2
PTP4A2-215	ENST00000533408	KCNH5	Q8NCM2	988 aa		28.77	■■■□□ 2.2
PTP4A2-215	ENST00000533408	COL16A1	Q07092	1604 aa	Predicted RBP	28.76	■■■□□ 2.2
PTP4A2-215	ENST00000533408	NRK	Q7Z2Y5	1582 aa		28.76	■■■□□ 2.19
PTP4A2-215	ENST00000533408	AMER1	Q5JTC6	1135 aa	Predicted RBP	28.75	■■■□□ 2.19
PTP4A2-215	ENST00000533408	HAP1	P54257	671 aa	Predicted RBP	28.74	■■■□□ 2.19
PTP4A2-215	ENST00000533408	GGNBP2	Q9H3C7	697 aa		28.73	■■■□□ 2.19
PTP4A2-215	ENST00000533408	MORC1	Q86VD1	984 aa		28.72	■■■□□ 2.19
PTP4A2-215	ENST00000533408	PNPLA6	Q8IY17	1366 aa		28.72	■■■□□ 2.19
PTP4A2-215	ENST00000533408	SPATA31A6	Q5VVP1	1343 aa		28.71	■■■□□ 2.19
PTP4A2-215	ENST00000533408	NUTM2G	Q5VZR2	741 aa		28.71	■■■□□ 2.19
PTP4A2-215	ENST00000533408	ALS2	Q96Q42	1657 aa		28.7	■■■□□ 2.19
PTP4A2-215	ENST00000533408	CC2D1B	Q5T0F9	858 aa	Known RBP	28.69	■■■□□ 2.18
PTP4A2-215	ENST00000533408	USP19	O94966	1318 aa		28.69	■■■□□ 2.18
PTP4A2-215	ENST00000533408	GC	P02774	474 aa		28.66	■■■□□ 2.18
PTP4A2-215	ENST00000533408	RALBP1	Q15311	655 aa		28.66	■■■□□ 2.18
PTP4A2-215	ENST00000533408	OVOS2	A0A0J9YW53	1432 aa		28.66	■■■□□ 2.18
PTP4A2-215	ENST00000533408	OVOS2	Q6IE36	1432 aa		28.66	■■■□□ 2.18
PTP4A2-215	ENST00000533408	PIK3C2A	O00443	1686 aa		28.65	■■■□□ 2.18
PTP4A2-215	ENST00000533408	KIF20B	Q96Q89	1820 aa		28.64	■■■□□ 2.18
PTP4A2-215	ENST00000533408	MED1	Q15648	1581 aa	Predicted RBP	28.64	■■■□□ 2.18
PTP4A2-215	ENST00000533408	ZRANB1	Q9UGI0	708 aa		28.64	■■■□□ 2.18
PTP4A2-215	ENST00000533408	COL22A1	Q8NFW1	1626 aa	Predicted RBP	28.63	■■■□□ 2.17
PTP4A2-215	ENST00000533408	ANP32C	O43423	234 aa		28.63	■■■□□ 2.17
PTP4A2-215	ENST00000533408	SHPRH	Q149N8	1683 aa		28.62	■■■□□ 2.17
PTP4A2-215	ENST00000533408	USP54	Q70EL1	1684 aa		28.61	■■■□□ 2.17
PTP4A2-215	ENST00000533408	CABLES1	Q8TDN4	633 aa		28.6	■■■□□ 2.17
PTP4A2-215	ENST00000533408	AATK	Q6ZMQ8	1374 aa		28.6	■■■□□ 2.17
PTP4A2-215	ENST00000533408	PLEKHG5	O94827	1062 aa		28.59	■■■□□ 2.17
PTP4A2-215	ENST00000533408	SLIT3	O75094	1523 aa		28.59	■■■□□ 2.17
PTP4A2-215	ENST00000533408	DIEXF	Q68CQ4	756 aa	Known RBP	28.58	■■■□□ 2.17
PTP4A2-215	ENST00000533408	NUTM2B	A6NNL0	878 aa	Predicted RBP	28.57	■■■□□ 2.16
PTP4A2-215	ENST00000533408	NUTM2E	B1AL46	878 aa	Predicted RBP	28.57	■■■□□ 2.16
PTP4A2-215	ENST00000533408	CNGB1	Q14028	1251 aa	Predicted RBP	28.57	■■■□□ 2.16
PTP4A2-215	ENST00000533408	NUTM2A	Q8IVF1	878 aa	Predicted RBP	28.57	■■■□□ 2.16
PTP4A2-215	ENST00000533408	ANKRD26	Q9UPS8	1709 aa		28.55	■■■□□ 2.16
PTP4A2-215	ENST00000533408	CPD	O75976	1380 aa		28.55	■■■□□ 2.16
PTP4A2-215	ENST00000533408	SOX12	O15370	315 aa		28.55	■■■□□ 2.16
PTP4A2-215	ENST00000533408	KIF24	Q5T7B8	1368 aa		28.54	■■■□□ 2.16
PTP4A2-215	ENST00000533408	TNNT2	P45379	298 aa	Predicted RBP	28.54	■■■□□ 2.16
PTP4A2-215	ENST00000533408	PARD3	Q8TEW0	1356 aa		28.53	■■■□□ 2.16
PTP4A2-215	ENST00000533408	PRKRIP1	Q9H875	184 aa	Predicted RBP	28.53	■■■□□ 2.16
PTP4A2-215	ENST00000533408	PRDM11	Q9NQV5	511 aa		28.53	■■■□□ 2.16
PTP4A2-215	ENST00000533408	ZC3H6	P61129	1189 aa	Known RBP	28.52	■■■□□ 2.16
PTP4A2-215	ENST00000533408	ARHGEF25	Q86VW2	580 aa		28.52	■■■□□ 2.16
PTP4A2-215	ENST00000533408	AMPH	P49418	695 aa		28.51	■■■□□ 2.15
PTP4A2-215	ENST00000533408	MEX3C	Q5U5Q3	659 aa	Known RBP	28.51	■■■□□ 2.15
PTP4A2-215	ENST00000533408	ILDR1	Q86SU0	546 aa	Predicted RBP	28.5	■■■□□ 2.15
PTP4A2-215	ENST00000533408	ADAMTS2	O95450	1211 aa		28.49	■■■□□ 2.15
PTP4A2-215	ENST00000533408	PHRF1	Q9P1Y6	1649 aa	Known RBP	28.48	■■■□□ 2.15
PTP4A2-215	ENST00000533408	KIAA0232	Q92628	1395 aa		28.48	■■■□□ 2.15
PTP4A2-215	ENST00000533408	MYBBP1A	Q9BQG0	1328 aa	Known RBP	28.47	■■■□□ 2.15
PTP4A2-215	ENST00000533408	CFAP53	Q96M91	514 aa		28.47	■■■□□ 2.15
PTP4A2-215	ENST00000533408	POLK	Q9UBT6	870 aa		28.47	■■■□□ 2.15
PTP4A2-215	ENST00000533408	NFAT5	O94916	1531 aa		28.47	■■■□□ 2.15
PTP4A2-215	ENST00000533408	RTL1	A6NKG5	1358 aa		28.47	■■■□□ 2.15
PTP4A2-215	ENST00000533408	MAP3K19	Q56UN5	1328 aa		28.46	■■■□□ 2.15
PTP4A2-215	ENST00000533408	ZBTB7C	A1YPR0	619 aa		28.46	■■■□□ 2.15
PTP4A2-215	ENST00000533408	PPP2R1A	P30153	589 aa		28.46	■■■□□ 2.15
PTP4A2-215	ENST00000533408	MARF1	Q9Y4F3	1742 aa	Known RBP	28.46	■■■□□ 2.15
PTP4A2-215	ENST00000533408	PPM1G	O15355	546 aa	Predicted RBP	28.45	■■■□□ 2.14
PTP4A2-215	ENST00000533408	RRS1	Q15050	365 aa	Known RBP	28.45	■■■□□ 2.14
PTP4A2-215	ENST00000533408	IP6K1	Q92551	441 aa		28.45	■■■□□ 2.14
PTP4A2-215	ENST00000533408	CRYBG1	Q9Y4K1	1723 aa		28.45	■■■□□ 2.14
PTP4A2-215	ENST00000533408	NGLY1	Q96IV0	654 aa		28.44	■■■□□ 2.14
PTP4A2-215	ENST00000533408	FLT4	P35916	1363 aa		28.44	■■■□□ 2.14
PTP4A2-215	ENST00000533408	MTHFS	P49914	203 aa		28.43	■■■□□ 2.14
PTP4A2-215	ENST00000533408	ABCC6	O95255	1503 aa		28.43	■■■□□ 2.14
PTP4A2-215	ENST00000533408	FAM83G	A6ND36	823 aa		28.42	■■■□□ 2.14
PTP4A2-215	ENST00000533408	ABCA3	Q99758	1704 aa		28.42	■■■□□ 2.14
PTP4A2-215	ENST00000533408	EMILIN1	Q9Y6C2	1016 aa		28.41	■■■□□ 2.14
PTP4A2-215	ENST00000533408	FBLN1	P23142	703 aa		28.4	■■■□□ 2.14
PTP4A2-215	ENST00000533408	HOXC9	P31274	260 aa		28.4	■■■□□ 2.14
PTP4A2-215	ENST00000533408	BLM	P54132	1417 aa	Predicted RBP	28.4	■■■□□ 2.14
PTP4A2-215	ENST00000533408	EVA1C	P58658	441 aa		28.39	■■■□□ 2.14

Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms