RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 FAM107BQ9H098 131 aa9.4□□□□□ -0.9
CSRP1-218ENST00000533402 NAT10Q9H0A0 1025 aaKnown RBP9.4□□□□□ -0.9
CSRP1-218ENST00000533402 LMOD3Q0VAK6 560 aa9.4□□□□□ -0.9
CSRP1-218ENST00000533402 KANK4Q5T7N3 995 aaPredicted RBP9.4□□□□□ -0.9
CSRP1-218ENST00000533402 DCAF11Q8TEB1 546 aa9.4□□□□□ -0.9
CSRP1-218ENST00000533402 CGNL1Q0VF96 1302 aa9.4□□□□□ -0.9
CSRP1-218ENST00000533402 DAPK1P53355 1430 aa9.4□□□□□ -0.9
CSRP1-218ENST00000533402 MNAT1P51948 309 aa9.4□□□□□ -0.9
CSRP1-218ENST00000533402 ANKRD20A12PQ8NF67 263 aa9.4□□□□□ -0.9
CSRP1-218ENST00000533402 IBSPP21815 317 aaPredicted RBP9.4□□□□□ -0.9
CSRP1-218ENST00000533402 RNF20Q5VTR2 975 aa9.4□□□□□ -0.9
CSRP1-218ENST00000533402 PPP6R1Q9UPN7 881 aa9.4□□□□□ -0.9
CSRP1-218ENST00000533402 SPDYE4A6NLX3 237 aa9.4□□□□□ -0.9
CSRP1-218ENST00000533402 REC8O95072 547 aa9.4□□□□□ -0.9
CSRP1-218ENST00000533402 GGT6Q6P531 493 aa9.4□□□□□ -0.9
CSRP1-218ENST00000533402 KIF3BO15066 747 aa9.39□□□□□ -0.91
CSRP1-218ENST00000533402 C9orf84Q5VXU9 1444 aa9.39□□□□□ -0.91
CSRP1-218ENST00000533402 MPNDQ8N594 471 aa9.39□□□□□ -0.91
CSRP1-218ENST00000533402 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.39□□□□□ -0.91
CSRP1-218ENST00000533402 NGDNQ8NEJ9 315 aaKnown RBP9.39□□□□□ -0.91
CSRP1-218ENST00000533402 CLGNO14967 610 aa9.39□□□□□ -0.91
CSRP1-218ENST00000533402 ANKRD45Q5TZF3 282 aa9.39□□□□□ -0.91
CSRP1-218ENST00000533402 TMCO3Q6UWJ1 677 aa9.39□□□□□ -0.91
CSRP1-218ENST00000533402 VGLL3A8MV65 326 aa9.38□□□□□ -0.91
CSRP1-218ENST00000533402 PRPF40AO75400 957 aaKnown RBP9.38□□□□□ -0.91
CSRP1-218ENST00000533402 CLCN1P35523 988 aa9.38□□□□□ -0.91
CSRP1-218ENST00000533402 FBXW7Q969H0 707 aa9.38□□□□□ -0.91
CSRP1-218ENST00000533402 STK31Q9BXU1 1019 aa9.38□□□□□ -0.91
CSRP1-218ENST00000533402 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.38□□□□□ -0.91
CSRP1-218ENST00000533402 GOLGA6L10A6NI86 522 aa9.38□□□□□ -0.91
CSRP1-218ENST00000533402 CTR9Q6PD62 1173 aa9.38□□□□□ -0.91
CSRP1-218ENST00000533402 DNAAF4Q8WXU2 420 aa9.38□□□□□ -0.91
CSRP1-218ENST00000533402 CCDC102AQ96A19 550 aa9.38□□□□□ -0.91
CSRP1-218ENST00000533402 BACH2Q9BYV9 841 aa9.38□□□□□ -0.91
CSRP1-218ENST00000533402 XPCQ01831 940 aaPredicted RBP9.38□□□□□ -0.91
CSRP1-218ENST00000533402 PCMTD1Q96MG8 357 aaPredicted RBP9.38□□□□□ -0.91
CSRP1-218ENST00000533402 NLRP13Q86W25 1043 aa9.38□□□□□ -0.91
CSRP1-218ENST00000533402 KIAA0556O60303 1618 aa9.37□□□□□ -0.91
CSRP1-218ENST00000533402 MCM4P33991 863 aa9.37□□□□□ -0.91
CSRP1-218ENST00000533402 SMAP1Q8IYB5 467 aaPredicted RBP9.37□□□□□ -0.91
CSRP1-218ENST00000533402 SHTN1A0MZ66 631 aa9.37□□□□□ -0.91
CSRP1-218ENST00000533402 PDILTQ8N807 584 aa9.37□□□□□ -0.91
CSRP1-218ENST00000533402 KAT6BQ8WYB5 2073 aa9.37□□□□□ -0.91
CSRP1-218ENST00000533402 LRRCC1Q9C099 1032 aa9.37□□□□□ -0.91
CSRP1-218ENST00000533402 MORC1Q86VD1 984 aa9.36□□□□□ -0.91
CSRP1-218ENST00000533402 HOOK1Q9UJC3 728 aaKnown RBP9.36□□□□□ -0.91
CSRP1-218ENST00000533402 NF2P35240 595 aa9.36□□□□□ -0.91
CSRP1-218ENST00000533402 UBXN4Q92575 508 aa9.36□□□□□ -0.91
CSRP1-218ENST00000533402 POLR3GO15318 223 aaPredicted RBP9.36□□□□□ -0.91
CSRP1-218ENST00000533402 NAP1L1P55209 391 aaKnown RBP9.36□□□□□ -0.91
CSRP1-218ENST00000533402 KLHL34Q8N239 644 aa9.36□□□□□ -0.91
CSRP1-218ENST00000533402 MARCH6O60337 910 aa9.36□□□□□ -0.91
CSRP1-218ENST00000533402 CCDC73Q6ZRK6 1079 aa9.36□□□□□ -0.91
CSRP1-218ENST00000533402 TOMM22Q9NS69 142 aa9.35□□□□□ -0.91
CSRP1-218ENST00000533402 VPS37CA5D8V6 355 aaPredicted RBP9.35□□□□□ -0.91
CSRP1-218ENST00000533402 CCAR1Q8IX12 1150 aaKnown RBP9.35□□□□□ -0.91
CSRP1-218ENST00000533402 CLASRPQ8N2M8 674 aaKnown RBP9.35□□□□□ -0.91
CSRP1-218ENST00000533402 ATF3P18847 181 aa9.35□□□□□ -0.91
CSRP1-218ENST00000533402 VPS53Q5VIR6 699 aa9.35□□□□□ -0.91
CSRP1-218ENST00000533402 PAIP2Q9BPZ3 127 aaKnown RBP9.35□□□□□ -0.91
CSRP1-218ENST00000533402 DHX8Q14562 1220 aaKnown RBP9.35□□□□□ -0.91
CSRP1-218ENST00000533402 CCDC146Q8IYE0 955 aa9.35□□□□□ -0.91
CSRP1-218ENST00000533402 COG6Q9Y2V7 657 aa9.35□□□□□ -0.91
CSRP1-218ENST00000533402 MYO6Q9UM54 1294 aa9.34□□□□□ -0.91
CSRP1-218ENST00000533402 SMC3Q9UQE7 1217 aa9.34□□□□□ -0.91
CSRP1-218ENST00000533402 SMC2O95347 1197 aa9.34□□□□□ -0.91
CSRP1-218ENST00000533402 SARNPP82979 210 aaKnown RBP9.34□□□□□ -0.91
CSRP1-218ENST00000533402 RILPL2Q969X0 211 aa9.34□□□□□ -0.91
CSRP1-218ENST00000533402 RPGRIP1LQ68CZ1 1315 aa9.34□□□□□ -0.91
CSRP1-218ENST00000533402 CCDC94Q9BW85 323 aaPredicted RBP9.34□□□□□ -0.91
CSRP1-218ENST00000533402 CCDC91Q7Z6B0 441 aa9.34□□□□□ -0.91
CSRP1-218ENST00000533402 TXLNBQ8N3L3 684 aa9.34□□□□□ -0.91
CSRP1-218ENST00000533402 HNRNPMP52272 730 aaKnown RBP eCLIP9.34□□□□□ -0.91
CSRP1-218ENST00000533402 FAM193AP78312 1265 aa9.33□□□□□ -0.92
CSRP1-218ENST00000533402 KIF20AO95235 890 aa9.33□□□□□ -0.92
CSRP1-218ENST00000533402 BRD2P25440 801 aaKnown RBP9.33□□□□□ -0.92
CSRP1-218ENST00000533402 SOX12O15370 315 aa9.33□□□□□ -0.92
CSRP1-218ENST00000533402 WWC2Q6AWC2 1192 aa9.33□□□□□ -0.92
CSRP1-218ENST00000533402 SLC52A1Q9NWF4 448 aa9.33□□□□□ -0.92
CSRP1-218ENST00000533402 CCDC192P0DO97 292 aa9.33□□□□□ -0.92
CSRP1-218ENST00000533402 C11orf95C9JLR9 678 aaPredicted RBP9.32□□□□□ -0.92
CSRP1-218ENST00000533402 KRT222Q8N1A0 295 aa9.32□□□□□ -0.92
CSRP1-218ENST00000533402 FBXO3Q9UK99 471 aa9.32□□□□□ -0.92
CSRP1-218ENST00000533402 EVC2Q86UK5 1308 aa9.32□□□□□ -0.92
CSRP1-218ENST00000533402 PRKRIP1Q9H875 184 aaPredicted RBP9.32□□□□□ -0.92
CSRP1-218ENST00000533402 HMGB1P09429 215 aaKnown RBP9.32□□□□□ -0.92
CSRP1-218ENST00000533402 U2AF1L5P0DN76 240 aaPredicted RBP9.32□□□□□ -0.92
CSRP1-218ENST00000533402 AMPHP49418 695 aa9.32□□□□□ -0.92
CSRP1-218ENST00000533402 U2AF1Q01081 240 aaKnown RBP eCLIP9.32□□□□□ -0.92
CSRP1-218ENST00000533402 C1orf141Q5JVX7 400 aa9.32□□□□□ -0.92
CSRP1-218ENST00000533402 CPSF2Q9P2I0 782 aaKnown RBP9.32□□□□□ -0.92
CSRP1-218ENST00000533402 SHANK2Q9UPX8 1470 aa9.32□□□□□ -0.92
CSRP1-218ENST00000533402 MCM5P33992 734 aa9.32□□□□□ -0.92
CSRP1-218ENST00000533402 ODF2Q5BJF6 829 aa9.32□□□□□ -0.92
CSRP1-218ENST00000533402 PRIMPOLQ96LW4 560 aa9.32□□□□□ -0.92
CSRP1-218ENST00000533402 GBP2P32456 591 aaPredicted RBP9.32□□□□□ -0.92
CSRP1-218ENST00000533402 ZFP91Q96JP5 570 aaPredicted RBP9.32□□□□□ -0.92
CSRP1-218ENST00000533402 ANKRD30BQ9BXX2 1392 aa9.31□□□□□ -0.92
CSRP1-218ENST00000533402 TMCO5BA8MYB1 307 aa9.31□□□□□ -0.92
CSRP1-218ENST00000533402 OLFM4Q6UX06 510 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms