RNA–Protein interactions for RNA: ENST00000533286.5

LINC00964-209, long intergenic non-protein coding RNA 964, humanhuman

TSL 3

Gene LINC00964, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00964-209ENST00000533286 CDCA8Q53HL2 280 aa11.86□□□□□ -0.51
LINC00964-209ENST00000533286 FNBP4Q8N3X1 1017 aaPredicted RBP11.86□□□□□ -0.51
LINC00964-209ENST00000533286 SIRT1Q96EB6 747 aa11.86□□□□□ -0.51
LINC00964-209ENST00000533286 POLR3GLQ9BT43 218 aa11.86□□□□□ -0.51
LINC00964-209ENST00000533286 NPHP3Q7Z494 1330 aa11.86□□□□□ -0.51
LINC00964-209ENST00000533286 USP21Q9UK80 565 aa11.85□□□□□ -0.51
LINC00964-209ENST00000533286 BCL9LQ86UU0 1499 aa11.84□□□□□ -0.51
LINC00964-209ENST00000533286 ATRNO75882 1429 aa11.84□□□□□ -0.51
LINC00964-209ENST00000533286 KIF1AQ12756 1690 aa11.84□□□□□ -0.51
LINC00964-209ENST00000533286 USP32Q8NFA0 1604 aa11.83□□□□□ -0.52
LINC00964-209ENST00000533286 DLC1Q96QB1 1528 aa11.83□□□□□ -0.52
LINC00964-209ENST00000533286 SPATA31A3Q5VYP0 1347 aa11.83□□□□□ -0.52
LINC00964-209ENST00000533286 EVC2Q86UK5 1308 aa11.83□□□□□ -0.52
LINC00964-209ENST00000533286 MINK1Q8N4C8 1332 aaPredicted RBP11.83□□□□□ -0.52
LINC00964-209ENST00000533286 RBM42Q9BTD8 480 aaKnown RBP11.82□□□□□ -0.52
LINC00964-209ENST00000533286 KRT28Q7Z3Y7 464 aa11.81□□□□□ -0.52
LINC00964-209ENST00000533286 TRPC5Q9UL62 973 aaPredicted RBP11.81□□□□□ -0.52
LINC00964-209ENST00000533286 SBNO2Q9Y2G9 1366 aa11.8□□□□□ -0.52
LINC00964-209ENST00000533286 ARHGEF28Q8N1W1 1705 aaKnown RBP11.8□□□□□ -0.52
LINC00964-209ENST00000533286 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.8□□□□□ -0.52
LINC00964-209ENST00000533286 SRPK2P78362 688 aaKnown RBP11.8□□□□□ -0.52
LINC00964-209ENST00000533286 MKRN4PQ13434 485 aaPredicted RBP11.8□□□□□ -0.52
LINC00964-209ENST00000533286 TESK2Q96S53 571 aa11.8□□□□□ -0.52
LINC00964-209ENST00000533286 QRICH2Q9H0J4 1663 aa11.79□□□□□ -0.52
LINC00964-209ENST00000533286 PHF8Q9UPP1 1060 aa11.79□□□□□ -0.52
LINC00964-209ENST00000533286 ABCA3Q99758 1704 aa11.79□□□□□ -0.52
LINC00964-209ENST00000533286 SLIT2O94813 1529 aa11.79□□□□□ -0.52
LINC00964-209ENST00000533286 ADGRB2O60241 1585 aa11.79□□□□□ -0.52
LINC00964-209ENST00000533286 GLI3P10071 1580 aa11.79□□□□□ -0.52
LINC00964-209ENST00000533286 CABLES1Q8TDN4 633 aa11.78□□□□□ -0.52
LINC00964-209ENST00000533286 EP400Q96L91 3159 aa11.78□□□□□ -0.52
LINC00964-209ENST00000533286 CCDC7Q96M83 1385 aa11.78□□□□□ -0.52
LINC00964-209ENST00000533286 CDK19Q9BWU1 502 aa11.77□□□□□ -0.53
LINC00964-209ENST00000533286 KIF7Q2M1P5 1343 aa11.77□□□□□ -0.53
LINC00964-209ENST00000533286 TRPM3Q9HCF6 1732 aaPredicted RBP11.77□□□□□ -0.53
LINC00964-209ENST00000533286 TNS3Q68CZ2 1445 aa11.77□□□□□ -0.53
LINC00964-209ENST00000533286 BRWD3Q6RI45 1802 aa11.76□□□□□ -0.53
LINC00964-209ENST00000533286 WASLO00401 505 aaPredicted RBP11.76□□□□□ -0.53
LINC00964-209ENST00000533286 PMFBP1Q8TBY8 1022 aa11.76□□□□□ -0.53
LINC00964-209ENST00000533286 TMC1Q8TDI8 760 aa11.76□□□□□ -0.53
LINC00964-209ENST00000533286 GJD4Q96KN9 370 aaPredicted RBP11.76□□□□□ -0.53
LINC00964-209ENST00000533286 WASHC2AQ641Q2 1341 aa11.76□□□□□ -0.53
LINC00964-209ENST00000533286 PRR36Q9H6K5 1346 aa11.76□□□□□ -0.53
LINC00964-209ENST00000533286 PLCH1Q4KWH8 1693 aa11.75□□□□□ -0.53
LINC00964-209ENST00000533286 C11orf95C9JLR9 678 aaPredicted RBP11.75□□□□□ -0.53
LINC00964-209ENST00000533286 DDX10Q13206 875 aaKnown RBP11.75□□□□□ -0.53
LINC00964-209ENST00000533286 UNC5CLQ8IV45 518 aa11.75□□□□□ -0.53
LINC00964-209ENST00000533286 PUS7Q96PZ0 661 aaKnown RBP11.75□□□□□ -0.53
LINC00964-209ENST00000533286 CABP2Q9NPB3 220 aa11.75□□□□□ -0.53
LINC00964-209ENST00000533286 SBNO1A3KN83 1393 aa11.75□□□□□ -0.53
LINC00964-209ENST00000533286 ATAD2Q6PL18 1390 aa11.75□□□□□ -0.53
LINC00964-209ENST00000533286 ANKARQ7Z5J8 1434 aa11.75□□□□□ -0.53
LINC00964-209ENST00000533286 ALS2Q96Q42 1657 aa11.75□□□□□ -0.53
LINC00964-209ENST00000533286 PLEKHG5O94827 1062 aa11.73□□□□□ -0.53
LINC00964-209ENST00000533286 PSME1Q06323 249 aa11.73□□□□□ -0.53
LINC00964-209ENST00000533286 NWD2Q9ULI1 1742 aa11.73□□□□□ -0.53
LINC00964-209ENST00000533286 CRYBG1Q9Y4K1 1723 aa11.73□□□□□ -0.53
LINC00964-209ENST00000533286 NUDT16Q96DE0 195 aaKnown RBP11.72□□□□□ -0.53
LINC00964-209ENST00000533286 NRAPQ86VF7 1730 aa11.72□□□□□ -0.53
LINC00964-209ENST00000533286 TULP4Q9NRJ4 1543 aa11.71□□□□□ -0.53
LINC00964-209ENST00000533286 FAM83GA6ND36 823 aa11.71□□□□□ -0.53
LINC00964-209ENST00000533286 ARHGEF10O15013 1369 aa11.7□□□□□ -0.54
LINC00964-209ENST00000533286 NINLQ9Y2I6 1382 aa11.7□□□□□ -0.54
LINC00964-209ENST00000533286 VPS72Q15906 364 aa11.7□□□□□ -0.54
LINC00964-209ENST00000533286 DIEXFQ68CQ4 756 aaKnown RBP11.7□□□□□ -0.54
LINC00964-209ENST00000533286 LMOD2Q6P5Q4 547 aa11.7□□□□□ -0.54
LINC00964-209ENST00000533286 HDGFL2Q7Z4V5 671 aaPredicted RBP11.7□□□□□ -0.54
LINC00964-209ENST00000533286 TERF2IPQ9NYB0 399 aa11.7□□□□□ -0.54
LINC00964-209ENST00000533286 CCDC61Q9Y6R9 512 aa11.7□□□□□ -0.54
LINC00964-209ENST00000533286 ONECUT3O60422 494 aaPredicted RBP11.69□□□□□ -0.54
LINC00964-209ENST00000533286 ATP7BP35670 1465 aa11.69□□□□□ -0.54
LINC00964-209ENST00000533286 SRCAPQ6ZRS2 3230 aa11.69□□□□□ -0.54
LINC00964-209ENST00000533286 SLC12A5Q9H2X9 1139 aa11.68□□□□□ -0.54
LINC00964-209ENST00000533286 CABP1Q9NZU7 370 aa11.68□□□□□ -0.54
LINC00964-209ENST00000533286 ITSN1Q15811 1721 aa11.68□□□□□ -0.54
LINC00964-209ENST00000533286 HAP1P54257 671 aaPredicted RBP11.67□□□□□ -0.54
LINC00964-209ENST00000533286 SEPT12Q8IYM1 358 aa11.67□□□□□ -0.54
LINC00964-209ENST00000533286 NGDNQ8NEJ9 315 aaKnown RBP11.67□□□□□ -0.54
LINC00964-209ENST00000533286 PANK3Q9H999 370 aa11.67□□□□□ -0.54
LINC00964-209ENST00000533286 KNSTRNQ9Y448 316 aa11.67□□□□□ -0.54
LINC00964-209ENST00000533286 TOPAZ1Q8N9V7 1692 aa11.67□□□□□ -0.54
LINC00964-209ENST00000533286 PPIP5K1Q6PFW1 1433 aa11.67□□□□□ -0.54
LINC00964-209ENST00000533286 COL14A1Q05707 1796 aaKnown RBP11.67□□□□□ -0.54
LINC00964-209ENST00000533286 CCDC125Q86Z20 511 aa11.66□□□□□ -0.54
LINC00964-209ENST00000533286 ZNF692Q9BU19 519 aaPredicted RBP11.65□□□□□ -0.54
LINC00964-209ENST00000533286 BTG4Q9NY30 223 aa11.65□□□□□ -0.54
LINC00964-209ENST00000533286 PHRF1Q9P1Y6 1649 aaKnown RBP11.64□□□□□ -0.55
LINC00964-209ENST00000533286 BLMP54132 1417 aaPredicted RBP11.64□□□□□ -0.55
LINC00964-209ENST00000533286 ANP32CO43423 234 aa11.64□□□□□ -0.55
LINC00964-209ENST00000533286 ANKRD36BQ8N2N9 1353 aa11.64□□□□□ -0.55
LINC00964-209ENST00000533286 PLEKHG3A1L390 1219 aa11.63□□□□□ -0.55
LINC00964-209ENST00000533286 CNGB1Q14028 1251 aaPredicted RBP11.63□□□□□ -0.55
LINC00964-209ENST00000533286 DEFB132Q7Z7B7 95 aa11.63□□□□□ -0.55
LINC00964-209ENST00000533286 AKT1S1Q96B36 256 aa11.63□□□□□ -0.55
LINC00964-209ENST00000533286 CCDC9Q9Y3X0 531 aaKnown RBP11.63□□□□□ -0.55
LINC00964-209ENST00000533286 KTN1Q86UP2 1357 aaKnown RBP11.63□□□□□ -0.55
LINC00964-209ENST00000533286 ACEP12821 1306 aa11.62□□□□□ -0.55
LINC00964-209ENST00000533286 PAK3O75914 559 aaPredicted RBP11.62□□□□□ -0.55
LINC00964-209ENST00000533286 FAM98CQ17RN3 349 aaKnown RBP11.62□□□□□ -0.55
LINC00964-209ENST00000533286 KRT27Q7Z3Y8 459 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms