RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 CLUAP1Q96AJ1 413 aa19.82■□□□□ 0.76
CACNA1E-208ENST00000533229 MYH16Q9H6N6 1097 aa19.82■□□□□ 0.76
CACNA1E-208ENST00000533229 TRIM35Q9UPQ4 493 aa19.82■□□□□ 0.76
CACNA1E-208ENST00000533229 METP08581 1390 aa19.82■□□□□ 0.76
CACNA1E-208ENST00000533229 DLC1Q96QB1 1528 aa19.82■□□□□ 0.76
CACNA1E-208ENST00000533229 RGS3P49796 1198 aa19.82■□□□□ 0.76
CACNA1E-208ENST00000533229 PNPLA6Q8IY17 1366 aa19.82■□□□□ 0.76
CACNA1E-208ENST00000533229 TSR2Q969E8 191 aaKnown RBP19.81■□□□□ 0.76
CACNA1E-208ENST00000533229 C8orf34Q49A92 452 aa19.81■□□□□ 0.76
CACNA1E-208ENST00000533229 DIAPH1O60610 1272 aaKnown RBP19.8■□□□□ 0.76
CACNA1E-208ENST00000533229 SETD1AO15047 1707 aaKnown RBP19.8■□□□□ 0.76
CACNA1E-208ENST00000533229 TXNDC2Q86VQ3 553 aa19.79■□□□□ 0.76
CACNA1E-208ENST00000533229 NBR1Q14596 966 aa19.78■□□□□ 0.76
CACNA1E-208ENST00000533229 FAM161AQ3B820 660 aa19.78■□□□□ 0.76
CACNA1E-208ENST00000533229 POLKQ9UBT6 870 aa19.78■□□□□ 0.76
CACNA1E-208ENST00000533229 NRXN3Q9Y4C0 1643 aa19.77■□□□□ 0.76
CACNA1E-208ENST00000533229 WASLO00401 505 aaPredicted RBP19.77■□□□□ 0.76
CACNA1E-208ENST00000533229 ESF1Q9H501 851 aaKnown RBP19.77■□□□□ 0.76
CACNA1E-208ENST00000533229 MAPK8IP3Q9UPT6 1336 aa19.77■□□□□ 0.76
CACNA1E-208ENST00000533229 NCKAP5LQ9HCH0 1330 aa19.76■□□□□ 0.75
CACNA1E-208ENST00000533229 ANKRD26Q9UPS8 1709 aa19.76■□□□□ 0.75
CACNA1E-208ENST00000533229 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.76■□□□□ 0.75
CACNA1E-208ENST00000533229 PPM1GO15355 546 aaPredicted RBP19.75■□□□□ 0.75
CACNA1E-208ENST00000533229 RIPK4P57078 832 aa19.75■□□□□ 0.75
CACNA1E-208ENST00000533229 EXOSC9Q06265 439 aaKnown RBP19.75■□□□□ 0.75
CACNA1E-208ENST00000533229 PCDHB15Q9Y5E8 787 aa19.75■□□□□ 0.75
CACNA1E-208ENST00000533229 ATP7BP35670 1465 aa19.75■□□□□ 0.75
CACNA1E-208ENST00000533229 CPSF1Q10570 1443 aaKnown RBP19.73■□□□□ 0.75
CACNA1E-208ENST00000533229 ZRANB1Q9UGI0 708 aa19.73■□□□□ 0.75
CACNA1E-208ENST00000533229 PPIP5K1Q6PFW1 1433 aa19.72■□□□□ 0.75
CACNA1E-208ENST00000533229 NME9Q86XW9 330 aa19.72■□□□□ 0.75
CACNA1E-208ENST00000533229 FCHSD2O94868 740 aa19.72■□□□□ 0.75
CACNA1E-208ENST00000533229 NUDT16Q96DE0 195 aaKnown RBP19.71■□□□□ 0.75
CACNA1E-208ENST00000533229 RSPH6AQ9H0K4 717 aa19.71■□□□□ 0.75
CACNA1E-208ENST00000533229 EMILIN1Q9Y6C2 1016 aa19.71■□□□□ 0.75
CACNA1E-208ENST00000533229 KIF13AQ9H1H9 1805 aa19.71■□□□□ 0.75
CACNA1E-208ENST00000533229 CT47B1P0C2W7 299 aaPredicted RBP19.7■□□□□ 0.74
CACNA1E-208ENST00000533229 TNRQ92752 1358 aa19.7■□□□□ 0.74
CACNA1E-208ENST00000533229 PRKAR2BP31323 418 aa19.7■□□□□ 0.74
CACNA1E-208ENST00000533229 SSH1Q8WYL5 1049 aa19.7■□□□□ 0.74
CACNA1E-208ENST00000533229 IL16Q14005 1332 aa19.69■□□□□ 0.74
CACNA1E-208ENST00000533229 KIF20BQ96Q89 1820 aa19.69■□□□□ 0.74
CACNA1E-208ENST00000533229 ZKSCAN2Q63HK3 967 aa19.69■□□□□ 0.74
CACNA1E-208ENST00000533229 EDC4Q6P2E9 1401 aaKnown RBP19.69■□□□□ 0.74
CACNA1E-208ENST00000533229 SMC4Q9NTJ3 1288 aa19.69■□□□□ 0.74
CACNA1E-208ENST00000533229 AAMPQ13685 434 aa19.68■□□□□ 0.74
CACNA1E-208ENST00000533229 MVPQ14764 893 aaKnown RBP19.68■□□□□ 0.74
CACNA1E-208ENST00000533229 PHACTR3Q96KR7 559 aa19.68■□□□□ 0.74
CACNA1E-208ENST00000533229 TMEM2Q9UHN6 1383 aa19.68■□□□□ 0.74
CACNA1E-208ENST00000533229 HMOX1P09601 288 aa19.67■□□□□ 0.74
CACNA1E-208ENST00000533229 DZIP1LQ8IYY4 767 aaKnown RBP19.67■□□□□ 0.74
CACNA1E-208ENST00000533229 SIRT1Q96EB6 747 aa19.67■□□□□ 0.74
CACNA1E-208ENST00000533229 PNNQ9H307 717 aaKnown RBP19.67■□□□□ 0.74
CACNA1E-208ENST00000533229 CCDC61Q9Y6R9 512 aa19.67■□□□□ 0.74
CACNA1E-208ENST00000533229 TECPR2O15040 1411 aa19.67■□□□□ 0.74
CACNA1E-208ENST00000533229 FAM135BQ49AJ0 1406 aa19.67■□□□□ 0.74
CACNA1E-208ENST00000533229 HDGFP51858 240 aaKnown RBP19.67■□□□□ 0.74
CACNA1E-208ENST00000533229 PMFBP1Q8TBY8 1022 aa19.67■□□□□ 0.74
CACNA1E-208ENST00000533229 LRRC7Q96NW7 1537 aa19.66■□□□□ 0.74
CACNA1E-208ENST00000533229 TRIM27P14373 513 aa19.66■□□□□ 0.74
CACNA1E-208ENST00000533229 CDC42BPGQ6DT37 1551 aa19.66■□□□□ 0.74
CACNA1E-208ENST00000533229 PRR36Q9H6K5 1346 aa19.66■□□□□ 0.74
CACNA1E-208ENST00000533229 IL13P35225 146 aa19.66■□□□□ 0.74
CACNA1E-208ENST00000533229 ROBO2Q9HCK4 1378 aa19.65■□□□□ 0.74
CACNA1E-208ENST00000533229 FTSJ3Q8IY81 847 aaKnown RBP19.65■□□□□ 0.74
CACNA1E-208ENST00000533229 CPS1P31327 1500 aa19.64■□□□□ 0.74
CACNA1E-208ENST00000533229 DDRGK1Q96HY6 314 aa19.64■□□□□ 0.74
CACNA1E-208ENST00000533229 LAS1LQ9Y4W2 734 aaKnown RBP19.64■□□□□ 0.74
CACNA1E-208ENST00000533229 LTKP29376 864 aa19.64■□□□□ 0.73
CACNA1E-208ENST00000533229 NOB1Q9ULX3 412 aaKnown RBP19.64■□□□□ 0.73
CACNA1E-208ENST00000533229 DEKP35659 375 aaKnown RBP19.63■□□□□ 0.73
CACNA1E-208ENST00000533229 SLC4A3P48751 1232 aa19.63■□□□□ 0.73
CACNA1E-208ENST00000533229 RRS1Q15050 365 aaKnown RBP19.63■□□□□ 0.73
CACNA1E-208ENST00000533229 ADAMTS13Q76LX8 1427 aa19.63■□□□□ 0.73
CACNA1E-208ENST00000533229 CEBPAP49715 358 aaPredicted RBP19.62■□□□□ 0.73
CACNA1E-208ENST00000533229 ATF7IPQ6VMQ6 1270 aa19.62■□□□□ 0.73
CACNA1E-208ENST00000533229 THUMPD2Q9BTF0 503 aaKnown RBP19.62■□□□□ 0.73
CACNA1E-208ENST00000533229 COG3Q96JB2 828 aa19.61■□□□□ 0.73
CACNA1E-208ENST00000533229 PDZRN3Q9UPQ7 1066 aa19.61■□□□□ 0.73
CACNA1E-208ENST00000533229 AATKQ6ZMQ8 1374 aa19.61■□□□□ 0.73
CACNA1E-208ENST00000533229 SEC24BO95487 1268 aa19.61■□□□□ 0.73
CACNA1E-208ENST00000533229 NFE2L2Q16236 605 aa19.6■□□□□ 0.73
CACNA1E-208ENST00000533229 RWDD1Q9H446 243 aaPredicted RBP19.6■□□□□ 0.73
CACNA1E-208ENST00000533229 USP19O94966 1318 aa19.6■□□□□ 0.73
CACNA1E-208ENST00000533229 UBR1Q8IWV7 1749 aa19.59■□□□□ 0.73
CACNA1E-208ENST00000533229 KNDC1Q76NI1 1749 aa19.58■□□□□ 0.73
CACNA1E-208ENST00000533229 ITPRIPQ8IWB1 547 aa19.58■□□□□ 0.73
CACNA1E-208ENST00000533229 MAP2P11137 1827 aaKnown RBP19.58■□□□□ 0.72
CACNA1E-208ENST00000533229 CDK12Q9NYV4 1490 aaPredicted RBP19.58■□□□□ 0.72
CACNA1E-208ENST00000533229 NUTM2FA1L443 756 aa19.58■□□□□ 0.72
CACNA1E-208ENST00000533229 NEFMP07197 916 aa19.58■□□□□ 0.72
CACNA1E-208ENST00000533229 TMEM57Q8N5G2 664 aa19.58■□□□□ 0.72
CACNA1E-208ENST00000533229 ZNF692Q9BU19 519 aaPredicted RBP19.58■□□□□ 0.72
CACNA1E-208ENST00000533229 SLC26A8Q96RN1 970 aa19.57■□□□□ 0.72
CACNA1E-208ENST00000533229 DDX19BQ9UMR2 479 aa19.56■□□□□ 0.72
CACNA1E-208ENST00000533229 PLEKHG1Q9ULL1 1385 aa19.55■□□□□ 0.72
CACNA1E-208ENST00000533229 ALDH1L2Q3SY69 923 aa19.55■□□□□ 0.72
CACNA1E-208ENST00000533229 TSPYL6Q8N831 410 aa19.55■□□□□ 0.72
CACNA1E-208ENST00000533229 ACEP12821 1306 aa19.54■□□□□ 0.72
CACNA1E-208ENST00000533229 KIF16BQ96L93 1317 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms