RNA–Protein interactions for RNA: ENST00000533154.1

C11orf54-212, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best)

Gene C11orf54, Length 903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-212ENST00000533154 ZCCHC6Q5VYS8 1495 aaKnown RBP9.12□□□□□ -0.95
C11orf54-212ENST00000533154 Q3C1V9 767 aa9.11□□□□□ -0.95
C11orf54-212ENST00000533154 GRIPAP1Q4V328 841 aa9.11□□□□□ -0.95
C11orf54-212ENST00000533154 C1orf115Q9H7X2 142 aa9.11□□□□□ -0.95
C11orf54-212ENST00000533154 PCMTD1Q96MG8 357 aaPredicted RBP9.1□□□□□ -0.95
C11orf54-212ENST00000533154 WASF2Q9Y6W5 498 aa9.1□□□□□ -0.95
C11orf54-212ENST00000533154 DCAF1Q9Y4B6 1507 aa9.1□□□□□ -0.95
C11orf54-212ENST00000533154 A6NJR5 290 aa9.09□□□□□ -0.95
C11orf54-212ENST00000533154 DXOO77932 396 aaKnown RBP9.09□□□□□ -0.95
C11orf54-212ENST00000533154 MS4A1P11836 297 aa9.09□□□□□ -0.95
C11orf54-212ENST00000533154 SULF1Q8IWU6 871 aa9.09□□□□□ -0.95
C11orf54-212ENST00000533154 ZFP42Q96MM3 310 aa9.09□□□□□ -0.95
C11orf54-212ENST00000533154 CC2D2AQ9P2K1 1620 aa9.09□□□□□ -0.95
C11orf54-212ENST00000533154 SH3D19Q5HYK7 790 aa9.08□□□□□ -0.96
C11orf54-212ENST00000533154 USB1Q9BQ65 265 aaKnown RBP9.08□□□□□ -0.96
C11orf54-212ENST00000533154 CLCN1P35523 988 aa9.07□□□□□ -0.96
C11orf54-212ENST00000533154 GSK3AP49840 483 aa9.07□□□□□ -0.96
C11orf54-212ENST00000533154 TMEM151AQ8N4L1 468 aa9.07□□□□□ -0.96
C11orf54-212ENST00000533154 PODXL2Q9NZ53 605 aa9.07□□□□□ -0.96
C11orf54-212ENST00000533154 CECR2Q9BXF3 1484 aa9.07□□□□□ -0.96
C11orf54-212ENST00000533154 SHROOM4Q9ULL8 1493 aa9.07□□□□□ -0.96
C11orf54-212ENST00000533154 SCRIBQ14160 1630 aa9.06□□□□□ -0.96
C11orf54-212ENST00000533154 EHBP1Q8NDI1 1231 aa9.06□□□□□ -0.96
C11orf54-212ENST00000533154 GPCPD1Q9NPB8 672 aa9.05□□□□□ -0.96
C11orf54-212ENST00000533154 APBB1O00213 710 aa9.04□□□□□ -0.96
C11orf54-212ENST00000533154 GDF11O95390 407 aa9.04□□□□□ -0.96
C11orf54-212ENST00000533154 EIF4G1Q04637 1599 aaKnown RBP9.03□□□□□ -0.96
C11orf54-212ENST00000533154 SOBPA7XYQ1 873 aa9.03□□□□□ -0.96
C11orf54-212ENST00000533154 SIAH2O43255 324 aa9.03□□□□□ -0.96
C11orf54-212ENST00000533154 MCM6Q14566 821 aa9.02□□□□□ -0.97
C11orf54-212ENST00000533154 ARID3AQ99856 593 aa9.02□□□□□ -0.97
C11orf54-212ENST00000533154 ARID3CA6NKF2 412 aa9.01□□□□□ -0.97
C11orf54-212ENST00000533154 TRAK2O60296 914 aa9.01□□□□□ -0.97
C11orf54-212ENST00000533154 VSIG8P0DPA2 414 aa9.01□□□□□ -0.97
C11orf54-212ENST00000533154 RASSF7Q02833 373 aa9.01□□□□□ -0.97
C11orf54-212ENST00000533154 SKIV2LQ15477 1246 aaKnown RBP9.01□□□□□ -0.97
C11orf54-212ENST00000533154 PURBQ96QR8 312 aaKnown RBP9□□□□□ -0.97
C11orf54-212ENST00000533154 SCARF1Q14162 830 aa8.99□□□□□ -0.97
C11orf54-212ENST00000533154 PHOX2BQ99453 314 aa8.99□□□□□ -0.97
C11orf54-212ENST00000533154 MDM2Q00987 491 aaPredicted RBP8.98□□□□□ -0.97
C11orf54-212ENST00000533154 MRPL14Q6P1L8 145 aaKnown RBP8.98□□□□□ -0.97
C11orf54-212ENST00000533154 CLUAP1Q96AJ1 413 aa8.98□□□□□ -0.97
C11orf54-212ENST00000533154 SSTR3P32745 418 aaPredicted RBP8.97□□□□□ -0.97
C11orf54-212ENST00000533154 TRIM26Q12899 539 aaPredicted RBP8.97□□□□□ -0.97
C11orf54-212ENST00000533154 HLA-CQ95604 372 aa8.97□□□□□ -0.97
C11orf54-212ENST00000533154 RNF225M0QZC1 329 aaPredicted RBP8.96□□□□□ -0.98
C11orf54-212ENST00000533154 PTCRAQ6ISU1 281 aaPredicted RBP8.96□□□□□ -0.98
C11orf54-212ENST00000533154 FAM217BQ9NTX9 383 aaPredicted RBP8.96□□□□□ -0.98
C11orf54-212ENST00000533154 JUNDP17535 347 aa8.95□□□□□ -0.98
C11orf54-212ENST00000533154 CCDC82Q8N4S0 544 aa8.95□□□□□ -0.98
C11orf54-212ENST00000533154 TLL2Q9Y6L7 1015 aa8.95□□□□□ -0.98
C11orf54-212ENST00000533154 KDM4AO75164 1064 aa8.94□□□□□ -0.98
C11orf54-212ENST00000533154 PROSER2Q86WR7 435 aaPredicted RBP8.94□□□□□ -0.98
C11orf54-212ENST00000533154 BEGAINQ9BUH8 593 aa8.94□□□□□ -0.98
C11orf54-212ENST00000533154 SH3BP2P78314 561 aa8.93□□□□□ -0.98
C11orf54-212ENST00000533154 GPAT2Q6NUI2 795 aa8.93□□□□□ -0.98
C11orf54-212ENST00000533154 NUDT12Q9BQG2 462 aa8.93□□□□□ -0.98
C11orf54-212ENST00000533154 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.93□□□□□ -0.98
C11orf54-212ENST00000533154 SPDYE5A6NIY4 337 aa8.92□□□□□ -0.98
C11orf54-212ENST00000533154 NNTQ13423 1086 aa8.92□□□□□ -0.98
C11orf54-212ENST00000533154 ADAMTS8Q9UP79 889 aa8.92□□□□□ -0.98
C11orf54-212ENST00000533154 MAN1A2O60476 641 aa8.91□□□□□ -0.98
C11orf54-212ENST00000533154 CD46P15529 392 aa8.91□□□□□ -0.98
C11orf54-212ENST00000533154 HRCP23327 699 aa8.91□□□□□ -0.98
C11orf54-212ENST00000533154 FNBP4Q8N3X1 1017 aaPredicted RBP8.91□□□□□ -0.98
C11orf54-212ENST00000533154 PPFIA3O75145 1194 aa8.9□□□□□ -0.98
C11orf54-212ENST00000533154 WDR4P57081 412 aaKnown RBP8.9□□□□□ -0.98
C11orf54-212ENST00000533154 DIXDC1Q155Q3 683 aa8.9□□□□□ -0.98
C11orf54-212ENST00000533154 MYSM1Q5VVJ2 828 aa8.9□□□□□ -0.98
C11orf54-212ENST00000533154 SYMPKQ92797 1274 aaKnown RBP8.9□□□□□ -0.98
C11orf54-212ENST00000533154 RAD21O60216 631 aa8.89□□□□□ -0.99
C11orf54-212ENST00000533154 TIMP2P16035 220 aa8.89□□□□□ -0.99
C11orf54-212ENST00000533154 CLK2P49760 499 aaKnown RBP8.89□□□□□ -0.99
C11orf54-212ENST00000533154 GUCA2AQ02747 115 aa8.89□□□□□ -0.99
C11orf54-212ENST00000533154 LINC01559Q495D7 138 aa8.89□□□□□ -0.99
C11orf54-212ENST00000533154 XP32Q5T750 250 aa8.89□□□□□ -0.99
C11orf54-212ENST00000533154 BANK1Q8NDB2 785 aa8.89□□□□□ -0.99
C11orf54-212ENST00000533154 PDIA4P13667 645 aaKnown RBP8.88□□□□□ -0.99
C11orf54-212ENST00000533154 C6orf118Q5T5N4 469 aa8.88□□□□□ -0.99
C11orf54-212ENST00000533154 PROCA1Q8NCQ7 364 aaPredicted RBP8.88□□□□□ -0.99
C11orf54-212ENST00000533154 ADH1CP00326 375 aa8.87□□□□□ -0.99
C11orf54-212ENST00000533154 USP46P62068 366 aa8.87□□□□□ -0.99
C11orf54-212ENST00000533154 CNTNAP3BQ96NU0 1288 aa8.87□□□□□ -0.99
C11orf54-212ENST00000533154 CNTNAP3Q9BZ76 1288 aa8.87□□□□□ -0.99
C11orf54-212ENST00000533154 HOXA2O43364 376 aa8.86□□□□□ -0.99
C11orf54-212ENST00000533154 SERPINA10Q9UK55 444 aa8.86□□□□□ -0.99
C11orf54-212ENST00000533154 IRS1P35568 1242 aa8.85□□□□□ -0.99
C11orf54-212ENST00000533154 KRT76Q01546 638 aa8.85□□□□□ -0.99
C11orf54-212ENST00000533154 POM121Q96HA1 1249 aa8.85□□□□□ -0.99
C11orf54-212ENST00000533154 POLR3EQ9NVU0 708 aa8.85□□□□□ -0.99
C11orf54-212ENST00000533154 DNMT3AQ9Y6K1 912 aaPredicted RBP8.85□□□□□ -0.99
C11orf54-212ENST00000533154 SOCS7O14512 581 aa8.84□□□□□ -0.99
C11orf54-212ENST00000533154 IGHA1P01876 353 aa8.84□□□□□ -0.99
C11orf54-212ENST00000533154 RANGAP1P46060 587 aaPredicted RBP8.84□□□□□ -0.99
C11orf54-212ENST00000533154 BAP1Q92560 729 aa8.84□□□□□ -0.99
C11orf54-212ENST00000533154 CCDC97Q96F63 343 aaPredicted RBP8.84□□□□□ -0.99
C11orf54-212ENST00000533154 COG6Q9Y2V7 657 aa8.84□□□□□ -0.99
C11orf54-212ENST00000533154 CCNYL3P0C7X3 344 aa8.83□□□□□ -1
C11orf54-212ENST00000533154 RFC5P40937 340 aa8.83□□□□□ -1
C11orf54-212ENST00000533154 TUSC1Q2TAM9 212 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms