RNA–Protein interactions for RNA: ENST00000532932.5

LTBP3-221, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2 BASIC

Gene LTBP3, Length 3,327 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-221ENST00000532932 ZCCHC11Q5TAX3 1644 aaKnown RBP18.45■□□□□ 0.54
LTBP3-221ENST00000532932 GOLGA6L22H0YM25 854 aa18.45■□□□□ 0.54
LTBP3-221ENST00000532932 ASXL2Q76L83 1435 aa18.45■□□□□ 0.54
LTBP3-221ENST00000532932 TRIM35Q9UPQ4 493 aa18.44■□□□□ 0.54
LTBP3-221ENST00000532932 NASPP49321 788 aaPredicted RBP18.44■□□□□ 0.54
LTBP3-221ENST00000532932 CIZ1Q9ULV3 898 aaPredicted RBP18.44■□□□□ 0.54
LTBP3-221ENST00000532932 CT47B1P0C2W7 299 aaPredicted RBP18.44■□□□□ 0.54
LTBP3-221ENST00000532932 DDIT3P35638 169 aa18.43■□□□□ 0.54
LTBP3-221ENST00000532932 SHPRHQ149N8 1683 aa18.43■□□□□ 0.54
LTBP3-221ENST00000532932 K7ELQ4 463 aaPredicted RBP18.43■□□□□ 0.54
LTBP3-221ENST00000532932 ELL2O00472 640 aaPredicted RBP18.43■□□□□ 0.54
LTBP3-221ENST00000532932 ABCA6Q8N139 1617 aa18.43■□□□□ 0.54
LTBP3-221ENST00000532932 RAPGEF3O95398 923 aa18.42■□□□□ 0.54
LTBP3-221ENST00000532932 GAS2L2Q8NHY3 880 aa18.42■□□□□ 0.54
LTBP3-221ENST00000532932 KIAA1211Q6ZU35 1233 aa18.42■□□□□ 0.54
LTBP3-221ENST00000532932 STK26Q9P289 416 aa18.41■□□□□ 0.54
LTBP3-221ENST00000532932 SRPK2P78362 688 aaKnown RBP18.41■□□□□ 0.54
LTBP3-221ENST00000532932 TBC1D9Q6ZT07 1266 aa18.41■□□□□ 0.54
LTBP3-221ENST00000532932 KIF16BQ96L93 1317 aa18.41■□□□□ 0.54
LTBP3-221ENST00000532932 MAP3K4Q9Y6R4 1608 aa18.4■□□□□ 0.54
LTBP3-221ENST00000532932 MSNP26038 577 aaKnown RBP18.39■□□□□ 0.54
LTBP3-221ENST00000532932 KIF2CQ99661 725 aa18.39■□□□□ 0.54
LTBP3-221ENST00000532932 EVC2Q86UK5 1308 aa18.39■□□□□ 0.54
LTBP3-221ENST00000532932 ABCC1P33527 1531 aa18.39■□□□□ 0.53
LTBP3-221ENST00000532932 BMP2KLQ5H9B9 411 aa18.39■□□□□ 0.53
LTBP3-221ENST00000532932 MCTP1Q6DN14 999 aa18.39■□□□□ 0.53
LTBP3-221ENST00000532932 NCOA3Q9Y6Q9 1424 aa18.38■□□□□ 0.53
LTBP3-221ENST00000532932 FANCAO15360 1455 aa18.38■□□□□ 0.53
LTBP3-221ENST00000532932 SBNO2Q9Y2G9 1366 aa18.38■□□□□ 0.53
LTBP3-221ENST00000532932 CCDC173Q0VFZ6 552 aa18.38■□□□□ 0.53
LTBP3-221ENST00000532932 C14orf93Q9H972 538 aaKnown RBP18.38■□□□□ 0.53
LTBP3-221ENST00000532932 PTMSP20962 102 aa18.37■□□□□ 0.53
LTBP3-221ENST00000532932 RBM10P98175 930 aaKnown RBP18.37■□□□□ 0.53
LTBP3-221ENST00000532932 PLEKHF1Q96S99 279 aa18.37■□□□□ 0.53
LTBP3-221ENST00000532932 CD109Q6YHK3 1445 aa18.37■□□□□ 0.53
LTBP3-221ENST00000532932 BAG4O95429 457 aaKnown RBP18.36■□□□□ 0.53
LTBP3-221ENST00000532932 TPM2P07951 284 aa18.36■□□□□ 0.53
LTBP3-221ENST00000532932 CAVIN1Q6NZI2 390 aaKnown RBP18.36■□□□□ 0.53
LTBP3-221ENST00000532932 THUMPD2Q9BTF0 503 aaKnown RBP18.36■□□□□ 0.53
LTBP3-221ENST00000532932 MYOM2P54296 1465 aa18.36■□□□□ 0.53
LTBP3-221ENST00000532932 ZSCAN30Q86W11 494 aa18.35■□□□□ 0.53
LTBP3-221ENST00000532932 UHRF1BP1LA0JNW5 1464 aa18.35■□□□□ 0.53
LTBP3-221ENST00000532932 CALD1Q05682 793 aaKnown RBP18.34■□□□□ 0.53
LTBP3-221ENST00000532932 FAM69CQ0P6D2 419 aa18.34■□□□□ 0.53
LTBP3-221ENST00000532932 DIAPH1O60610 1272 aaKnown RBP18.34■□□□□ 0.53
LTBP3-221ENST00000532932 TET3O43151 1660 aa18.34■□□□□ 0.53
LTBP3-221ENST00000532932 ARID3AQ99856 593 aa18.33■□□□□ 0.53
LTBP3-221ENST00000532932 KIAA1210Q9ULL0 1709 aa18.33■□□□□ 0.53
LTBP3-221ENST00000532932 ADGRL1O94910 1474 aa18.33■□□□□ 0.52
LTBP3-221ENST00000532932 APBB1O00213 710 aa18.33■□□□□ 0.52
LTBP3-221ENST00000532932 FBLN1P23142 703 aa18.33■□□□□ 0.52
LTBP3-221ENST00000532932 ZFYVE16Q7Z3T8 1539 aa18.33■□□□□ 0.52
LTBP3-221ENST00000532932 ABCC11Q96J66 1382 aa18.33■□□□□ 0.52
LTBP3-221ENST00000532932 ANKRD36BQ8N2N9 1353 aa18.32■□□□□ 0.52
LTBP3-221ENST00000532932 FOXD4L5Q5VV16 416 aaPredicted RBP18.32■□□□□ 0.52
LTBP3-221ENST00000532932 FOXD4L4Q8WXT5 416 aaPredicted RBP18.32■□□□□ 0.52
LTBP3-221ENST00000532932 R3HCC1Q9Y3T6 440 aaKnown RBP18.32■□□□□ 0.52
LTBP3-221ENST00000532932 CDC45O75419 566 aa18.32■□□□□ 0.52
LTBP3-221ENST00000532932 GCC1Q96CN9 775 aa18.32■□□□□ 0.52
LTBP3-221ENST00000532932 KLHL40Q2TBA0 621 aa18.31■□□□□ 0.52
LTBP3-221ENST00000532932 ZBTB7BO15156 539 aaPredicted RBP18.31■□□□□ 0.52
LTBP3-221ENST00000532932 HMOX1P09601 288 aa18.31■□□□□ 0.52
LTBP3-221ENST00000532932 PRKAR2BP31323 418 aa18.3■□□□□ 0.52
LTBP3-221ENST00000532932 MINK1Q8N4C8 1332 aaPredicted RBP18.3■□□□□ 0.52
LTBP3-221ENST00000532932 CFAP65Q6ZU64 1925 aaKnown RBP18.3■□□□□ 0.52
LTBP3-221ENST00000532932 FAM13BQ9NYF5 915 aa18.3■□□□□ 0.52
LTBP3-221ENST00000532932 TSPYL6Q8N831 410 aa18.29■□□□□ 0.52
LTBP3-221ENST00000532932 PPP1R9BQ96SB3 815 aa18.29■□□□□ 0.52
LTBP3-221ENST00000532932 PPIP5K1Q6PFW1 1433 aa18.29■□□□□ 0.52
LTBP3-221ENST00000532932 ZBTB7CA1YPR0 619 aa18.29■□□□□ 0.52
LTBP3-221ENST00000532932 PKP1Q13835 747 aa18.29■□□□□ 0.52
LTBP3-221ENST00000532932 ALDH1L2Q3SY69 923 aa18.29■□□□□ 0.52
LTBP3-221ENST00000532932 NCBP3Q53F19 620 aaKnown RBP18.29■□□□□ 0.52
LTBP3-221ENST00000532932 IL16Q14005 1332 aa18.29■□□□□ 0.52
LTBP3-221ENST00000532932 RBM27Q9P2N5 1060 aaKnown RBP18.29■□□□□ 0.52
LTBP3-221ENST00000532932 PRPF40AO75400 957 aaKnown RBP18.28■□□□□ 0.52
LTBP3-221ENST00000532932 FYB1O15117 783 aa18.28■□□□□ 0.52
LTBP3-221ENST00000532932 MLECQ14165 292 aa18.28■□□□□ 0.52
LTBP3-221ENST00000532932 SIRT2Q8IXJ6 389 aa18.28■□□□□ 0.52
LTBP3-221ENST00000532932 CHAMP1Q96JM3 812 aa18.28■□□□□ 0.52
LTBP3-221ENST00000532932 A0A1W2PP64 1363 aa18.27■□□□□ 0.52
LTBP3-221ENST00000532932 XPCQ01831 940 aaPredicted RBP18.27■□□□□ 0.52
LTBP3-221ENST00000532932 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.27■□□□□ 0.52
LTBP3-221ENST00000532932 PDCL3Q9H2J4 239 aa18.27■□□□□ 0.52
LTBP3-221ENST00000532932 ATP7AQ04656 1500 aa18.27■□□□□ 0.52
LTBP3-221ENST00000532932 NSD2O96028 1365 aa18.27■□□□□ 0.52
LTBP3-221ENST00000532932 OFD1O75665 1012 aa18.27■□□□□ 0.51
LTBP3-221ENST00000532932 ZSCAN23Q3MJ62 389 aa18.27■□□□□ 0.51
LTBP3-221ENST00000532932 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.27■□□□□ 0.51
LTBP3-221ENST00000532932 C16orf71Q8IYS4 520 aaPredicted RBP18.27■□□□□ 0.51
LTBP3-221ENST00000532932 KIF1BO60333 1816 aa18.27■□□□□ 0.51
LTBP3-221ENST00000532932 RBSNQ9H1K0 784 aa18.26■□□□□ 0.51
LTBP3-221ENST00000532932 ATAD2Q6PL18 1390 aa18.26■□□□□ 0.51
LTBP3-221ENST00000532932 GSPT1P15170 499 aaKnown RBP18.25■□□□□ 0.51
LTBP3-221ENST00000532932 MRPL50Q8N5N7 158 aaKnown RBP18.25■□□□□ 0.51
LTBP3-221ENST00000532932 CHMP4BQ9H444 224 aaKnown RBP18.25■□□□□ 0.51
LTBP3-221ENST00000532932 NUCB2P80303 420 aa18.25■□□□□ 0.51
LTBP3-221ENST00000532932 RABEP1Q15276 862 aa18.25■□□□□ 0.51
LTBP3-221ENST00000532932 TERF2IPQ9NYB0 399 aa18.25■□□□□ 0.51
LTBP3-221ENST00000532932 QRICH2Q9H0J4 1663 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 421 ms