RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 ABCC11Q96J66 1382 aa8.29□□□□□ -1.08
HMGB1P42-201ENST00000532126 XIRP1Q702N8 1843 aaKnown RBP8.29□□□□□ -1.08
HMGB1P42-201ENST00000532126 SETD1AO15047 1707 aaKnown RBP8.29□□□□□ -1.08
HMGB1P42-201ENST00000532126 FAM135BQ49AJ0 1406 aa8.29□□□□□ -1.08
HMGB1P42-201ENST00000532126 YTHDC2Q9H6S0 1430 aaKnown RBP8.29□□□□□ -1.08
HMGB1P42-201ENST00000532126 WAPLQ7Z5K2 1190 aa8.28□□□□□ -1.08
HMGB1P42-201ENST00000532126 L3MBTL2Q969R5 705 aa8.28□□□□□ -1.08
HMGB1P42-201ENST00000532126 ASXL1Q8IXJ9 1541 aa8.28□□□□□ -1.08
HMGB1P42-201ENST00000532126 TECPR2O15040 1411 aa8.28□□□□□ -1.08
HMGB1P42-201ENST00000532126 DCCP43146 1447 aa8.28□□□□□ -1.08
HMGB1P42-201ENST00000532126 ADGRL3Q9HAR2 1447 aa8.28□□□□□ -1.08
HMGB1P42-201ENST00000532126 SIRT1Q96EB6 747 aa8.27□□□□□ -1.09
HMGB1P42-201ENST00000532126 LAMC1P11047 1609 aa8.27□□□□□ -1.09
HMGB1P42-201ENST00000532126 PDAP1Q13442 181 aaKnown RBP8.26□□□□□ -1.09
HMGB1P42-201ENST00000532126 PRAM1Q96QH2 718 aa8.26□□□□□ -1.09
HMGB1P42-201ENST00000532126 POGKQ9P215 609 aa8.26□□□□□ -1.09
HMGB1P42-201ENST00000532126 TRAK1Q9UPV9 953 aa8.26□□□□□ -1.09
HMGB1P42-201ENST00000532126 PLEKHH1Q9ULM0 1364 aa8.25□□□□□ -1.09
HMGB1P42-201ENST00000532126 TESPA1A2RU30 521 aaPredicted RBP8.25□□□□□ -1.09
HMGB1P42-201ENST00000532126 PELP1Q8IZL8 1130 aaKnown RBP8.25□□□□□ -1.09
HMGB1P42-201ENST00000532126 ADGRB1O14514 1584 aa8.25□□□□□ -1.09
HMGB1P42-201ENST00000532126 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.25□□□□□ -1.09
HMGB1P42-201ENST00000532126 TONSLQ96HA7 1378 aa8.24□□□□□ -1.09
HMGB1P42-201ENST00000532126 MST1RQ04912 1400 aa8.24□□□□□ -1.09
HMGB1P42-201ENST00000532126 SAFB2Q14151 953 aaKnown RBP eCLIP8.24□□□□□ -1.09
HMGB1P42-201ENST00000532126 BRINP3Q76B58 766 aa8.24□□□□□ -1.09
HMGB1P42-201ENST00000532126 TSPYL2Q9H2G4 693 aaPredicted RBP8.24□□□□□ -1.09
HMGB1P42-201ENST00000532126 NBPF1Q3BBV0 1214 aa8.23□□□□□ -1.09
HMGB1P42-201ENST00000532126 AK7Q96M32 723 aa8.23□□□□□ -1.09
HMGB1P42-201ENST00000532126 ROBO1Q9Y6N7 1651 aa8.23□□□□□ -1.09
HMGB1P42-201ENST00000532126 DLC1Q96QB1 1528 aa8.23□□□□□ -1.09
HMGB1P42-201ENST00000532126 NALCNQ8IZF0 1738 aa8.23□□□□□ -1.09
HMGB1P42-201ENST00000532126 C1orf167Q5SNV9 1468 aa8.22□□□□□ -1.09
HMGB1P42-201ENST00000532126 APBB1O00213 710 aa8.22□□□□□ -1.09
HMGB1P42-201ENST00000532126 KNDC1Q76NI1 1749 aa8.22□□□□□ -1.09
HMGB1P42-201ENST00000532126 NUTM2FA1L443 756 aa8.21□□□□□ -1.1
HMGB1P42-201ENST00000532126 ESCO1Q5FWF5 840 aa8.21□□□□□ -1.1
HMGB1P42-201ENST00000532126 BARGINQ6ZT62 677 aa8.21□□□□□ -1.1
HMGB1P42-201ENST00000532126 IL27Q8NEV9 243 aa8.21□□□□□ -1.1
HMGB1P42-201ENST00000532126 ORAI2Q96SN7 254 aa8.21□□□□□ -1.1
HMGB1P42-201ENST00000532126 C1orf115Q9H7X2 142 aa8.21□□□□□ -1.1
HMGB1P42-201ENST00000532126 PCDHB8Q9UN66 801 aa8.21□□□□□ -1.1
HMGB1P42-201ENST00000532126 PCDHB13Q9Y5F0 798 aa8.21□□□□□ -1.1
HMGB1P42-201ENST00000532126 CDC42BPGQ6DT37 1551 aa8.21□□□□□ -1.1
HMGB1P42-201ENST00000532126 MINK1Q8N4C8 1332 aaPredicted RBP8.21□□□□□ -1.1
HMGB1P42-201ENST00000532126 PITPNM1O00562 1244 aa8.2□□□□□ -1.1
HMGB1P42-201ENST00000532126 MYT1Q01538 1121 aa8.2□□□□□ -1.1
HMGB1P42-201ENST00000532126 FLIIQ13045 1269 aa8.2□□□□□ -1.1
HMGB1P42-201ENST00000532126 CCER1Q8TC90 406 aaPredicted RBP8.2□□□□□ -1.1
HMGB1P42-201ENST00000532126 HIRIP3Q9BW71 556 aaPredicted RBP8.2□□□□□ -1.1
HMGB1P42-201ENST00000532126 MFRPQ9BY79 579 aa8.2□□□□□ -1.1
HMGB1P42-201ENST00000532126 ROCK2O75116 1388 aaKnown RBP8.2□□□□□ -1.1
HMGB1P42-201ENST00000532126 PSEN1P49768 467 aa8.19□□□□□ -1.1
HMGB1P42-201ENST00000532126 E2F4Q16254 413 aa8.19□□□□□ -1.1
HMGB1P42-201ENST00000532126 NBPF8Q3BBV2 869 aa8.19□□□□□ -1.1
HMGB1P42-201ENST00000532126 DDX17Q92841 729 aaKnown RBP8.19□□□□□ -1.1
HMGB1P42-201ENST00000532126 KIAA1210Q9ULL0 1709 aa8.19□□□□□ -1.1
HMGB1P42-201ENST00000532126 CLSPNQ9HAW4 1339 aa8.19□□□□□ -1.1
HMGB1P42-201ENST00000532126 JCADQ9P266 1359 aa8.19□□□□□ -1.1
HMGB1P42-201ENST00000532126 DISP3Q9P2K9 1392 aa8.19□□□□□ -1.1
HMGB1P42-201ENST00000532126 AHDC1Q5TGY3 1603 aaPredicted RBP8.18□□□□□ -1.1
HMGB1P42-201ENST00000532126 WASLO00401 505 aaPredicted RBP8.18□□□□□ -1.1
HMGB1P42-201ENST00000532126 SEMA3EO15041 775 aa8.18□□□□□ -1.1
HMGB1P42-201ENST00000532126 LRRC59Q96AG4 307 aaKnown RBP8.18□□□□□ -1.1
HMGB1P42-201ENST00000532126 EIF3AQ14152 1382 aaKnown RBP8.18□□□□□ -1.1
HMGB1P42-201ENST00000532126 PHLPP1O60346 1717 aa8.17□□□□□ -1.1
HMGB1P42-201ENST00000532126 FOXO3O43524 673 aa8.17□□□□□ -1.1
HMGB1P42-201ENST00000532126 CARD11Q9BXL7 1154 aa8.17□□□□□ -1.1
HMGB1P42-201ENST00000532126 NPHP3Q7Z494 1330 aa8.17□□□□□ -1.1
HMGB1P42-201ENST00000532126 CENPJQ9HC77 1338 aaPredicted RBP8.17□□□□□ -1.1
HMGB1P42-201ENST00000532126 ADGRB2O60241 1585 aa8.16□□□□□ -1.1
HMGB1P42-201ENST00000532126 COL16A1Q07092 1604 aaPredicted RBP8.16□□□□□ -1.1
HMGB1P42-201ENST00000532126 SOS2Q07890 1332 aaPredicted RBP8.16□□□□□ -1.1
HMGB1P42-201ENST00000532126 SPATA31A6Q5VVP1 1343 aa8.16□□□□□ -1.1
HMGB1P42-201ENST00000532126 ANKARQ7Z5J8 1434 aa8.16□□□□□ -1.1
HMGB1P42-201ENST00000532126 KCTD17Q8N5Z5 321 aa8.16□□□□□ -1.1
HMGB1P42-201ENST00000532126 ZNF579Q8NAF0 562 aaKnown RBP8.16□□□□□ -1.1
HMGB1P42-201ENST00000532126 CDK19Q9BWU1 502 aa8.16□□□□□ -1.1
HMGB1P42-201ENST00000532126 KDM4CQ9H3R0 1056 aa8.16□□□□□ -1.1
HMGB1P42-201ENST00000532126 GPBP1L1Q9HC44 474 aaPredicted RBP8.16□□□□□ -1.1
HMGB1P42-201ENST00000532126 PHF8Q9UPP1 1060 aa8.16□□□□□ -1.1
HMGB1P42-201ENST00000532126 ARHGEF28Q8N1W1 1705 aaKnown RBP8.15□□□□□ -1.1
HMGB1P42-201ENST00000532126 FMN2Q9NZ56 1722 aa8.15□□□□□ -1.1
HMGB1P42-201ENST00000532126 TRPM1Q7Z4N2 1603 aa8.15□□□□□ -1.1
HMGB1P42-201ENST00000532126 MED1Q15648 1581 aaPredicted RBP8.15□□□□□ -1.1
HMGB1P42-201ENST00000532126 GPRASP1Q5JY77 1395 aa8.15□□□□□ -1.1
HMGB1P42-201ENST00000532126 XPCQ01831 940 aaPredicted RBP8.15□□□□□ -1.1
HMGB1P42-201ENST00000532126 CHADLQ6NUI6 762 aa8.15□□□□□ -1.1
HMGB1P42-201ENST00000532126 RALGAPBQ86X10 1494 aa8.14□□□□□ -1.11
HMGB1P42-201ENST00000532126 PRR36Q9H6K5 1346 aa8.14□□□□□ -1.11
HMGB1P42-201ENST00000532126 NUTM2BA6NNL0 878 aaPredicted RBP8.14□□□□□ -1.11
HMGB1P42-201ENST00000532126 NUTM2EB1AL46 878 aaPredicted RBP8.14□□□□□ -1.11
HMGB1P42-201ENST00000532126 PPP1R37O75864 691 aa8.14□□□□□ -1.11
HMGB1P42-201ENST00000532126 NLRP6P59044 892 aa8.14□□□□□ -1.11
HMGB1P42-201ENST00000532126 SRPK2P78362 688 aaKnown RBP8.14□□□□□ -1.11
HMGB1P42-201ENST00000532126 PSME1Q06323 249 aa8.14□□□□□ -1.11
HMGB1P42-201ENST00000532126 KRT28Q7Z3Y7 464 aa8.14□□□□□ -1.11
HMGB1P42-201ENST00000532126 NUTM2AQ8IVF1 878 aaPredicted RBP8.14□□□□□ -1.11
HMGB1P42-201ENST00000532126 KRI1Q8N9T8 703 aaKnown RBP8.14□□□□□ -1.11
HMGB1P42-201ENST00000532126 PMFBP1Q8TBY8 1022 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms