RNA–Protein interactions for RNA: ENST00000532066.1

TRIM44-202, Transcript of tripartite motif containing 44, humanhuman

TSL 4

Gene TRIM44, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM44-202ENST00000532066 PTPRMP28827 1452 aa10.52□□□□□ -0.73
TRIM44-202ENST00000532066 TMEM2Q9UHN6 1383 aa10.52□□□□□ -0.73
TRIM44-202ENST00000532066 USP32Q8NFA0 1604 aa10.51□□□□□ -0.73
TRIM44-202ENST00000532066 SRPK2P78362 688 aaKnown RBP10.51□□□□□ -0.73
TRIM44-202ENST00000532066 MORC1Q86VD1 984 aa10.51□□□□□ -0.73
TRIM44-202ENST00000532066 CARD14Q9BXL6 1004 aa10.51□□□□□ -0.73
TRIM44-202ENST00000532066 NSD3Q9BZ95 1437 aa10.5□□□□□ -0.73
TRIM44-202ENST00000532066 TULP4Q9NRJ4 1543 aa10.5□□□□□ -0.73
TRIM44-202ENST00000532066 SLC12A5Q9H2X9 1139 aa10.5□□□□□ -0.73
TRIM44-202ENST00000532066 EID1Q9Y6B2 187 aa10.5□□□□□ -0.73
TRIM44-202ENST00000532066 FAM135BQ49AJ0 1406 aa10.5□□□□□ -0.73
TRIM44-202ENST00000532066 MYO5BQ9ULV0 1848 aa10.49□□□□□ -0.73
TRIM44-202ENST00000532066 POTEFA5A3E0 1075 aa10.49□□□□□ -0.73
TRIM44-202ENST00000532066 HDGFL2Q7Z4V5 671 aaPredicted RBP10.49□□□□□ -0.73
TRIM44-202ENST00000532066 CFAP53Q96M91 514 aa10.49□□□□□ -0.73
TRIM44-202ENST00000532066 POLR3AO14802 1390 aaPredicted RBP10.49□□□□□ -0.73
TRIM44-202ENST00000532066 TTLL13PA6NNM8 815 aa10.48□□□□□ -0.73
TRIM44-202ENST00000532066 CABP2Q9NPB3 220 aa10.48□□□□□ -0.73
TRIM44-202ENST00000532066 SCUBE2Q9NQ36 999 aa10.48□□□□□ -0.73
TRIM44-202ENST00000532066 PLEKHG1Q9ULL1 1385 aa10.48□□□□□ -0.73
TRIM44-202ENST00000532066 TECPR2O15040 1411 aa10.48□□□□□ -0.73
TRIM44-202ENST00000532066 POTEMA6NI47 508 aa10.47□□□□□ -0.73
TRIM44-202ENST00000532066 THEMISQ8N1K5 641 aaPredicted RBP10.47□□□□□ -0.73
TRIM44-202ENST00000532066 BCANQ96GW7 911 aa10.47□□□□□ -0.73
TRIM44-202ENST00000532066 CDK19Q9BWU1 502 aa10.47□□□□□ -0.73
TRIM44-202ENST00000532066 PLSCR2Q9NRY7 297 aa10.47□□□□□ -0.73
TRIM44-202ENST00000532066 ADAMTS8Q9UP79 889 aa10.47□□□□□ -0.73
TRIM44-202ENST00000532066 MINK1Q8N4C8 1332 aaPredicted RBP10.47□□□□□ -0.73
TRIM44-202ENST00000532066 SAFB2Q14151 953 aaKnown RBP eCLIP10.46□□□□□ -0.73
TRIM44-202ENST00000532066 PCDHB13Q9Y5F0 798 aa10.46□□□□□ -0.73
TRIM44-202ENST00000532066 MED14O60244 1454 aa10.45□□□□□ -0.74
TRIM44-202ENST00000532066 RNF123Q5XPI4 1314 aa10.45□□□□□ -0.74
TRIM44-202ENST00000532066 PRKCSHP14314 528 aaPredicted RBP10.45□□□□□ -0.74
TRIM44-202ENST00000532066 POTEGQ6S5H5 508 aa10.45□□□□□ -0.74
TRIM44-202ENST00000532066 PPP4R2Q9NY27 417 aa10.45□□□□□ -0.74
TRIM44-202ENST00000532066 UBR1Q8IWV7 1749 aa10.44□□□□□ -0.74
TRIM44-202ENST00000532066 ATP7BP35670 1465 aa10.44□□□□□ -0.74
TRIM44-202ENST00000532066 TXNDC2Q86VQ3 553 aa10.44□□□□□ -0.74
TRIM44-202ENST00000532066 FAM212AQ96EL1 285 aa10.44□□□□□ -0.74
TRIM44-202ENST00000532066 SLIT1O75093 1534 aa10.43□□□□□ -0.74
TRIM44-202ENST00000532066 ARHGAP23Q9P227 1491 aa10.43□□□□□ -0.74
TRIM44-202ENST00000532066 A0A1W2PP64 1363 aa10.43□□□□□ -0.74
TRIM44-202ENST00000532066 WASLO00401 505 aaPredicted RBP10.43□□□□□ -0.74
TRIM44-202ENST00000532066 TBX22Q9Y458 520 aa10.43□□□□□ -0.74
TRIM44-202ENST00000532066 KNDC1Q76NI1 1749 aa10.43□□□□□ -0.74
TRIM44-202ENST00000532066 METP08581 1390 aa10.42□□□□□ -0.74
TRIM44-202ENST00000532066 SETD1AO15047 1707 aaKnown RBP10.42□□□□□ -0.74
TRIM44-202ENST00000532066 IER5LQ5T953 404 aa10.42□□□□□ -0.74
TRIM44-202ENST00000532066 NRXN3Q9Y4C0 1643 aa10.42□□□□□ -0.74
TRIM44-202ENST00000532066 CPS1P31327 1500 aa10.42□□□□□ -0.74
TRIM44-202ENST00000532066 GOLGA2Q08379 1002 aa10.41□□□□□ -0.74
TRIM44-202ENST00000532066 WAPLQ7Z5K2 1190 aa10.41□□□□□ -0.74
TRIM44-202ENST00000532066 PNNQ9H307 717 aaKnown RBP10.41□□□□□ -0.74
TRIM44-202ENST00000532066 CABP1Q9NZU7 370 aa10.41□□□□□ -0.74
TRIM44-202ENST00000532066 RCAN3Q9UKA8 241 aa10.41□□□□□ -0.74
TRIM44-202ENST00000532066 TRIM35Q9UPQ4 493 aa10.41□□□□□ -0.74
TRIM44-202ENST00000532066 COLQQ9Y215 455 aaPredicted RBP10.41□□□□□ -0.74
TRIM44-202ENST00000532066 FER1L4A9Z1Z3 1794 aa10.41□□□□□ -0.74
TRIM44-202ENST00000532066 ADAMTS13Q76LX8 1427 aa10.41□□□□□ -0.74
TRIM44-202ENST00000532066 C3P01024 1663 aa10.41□□□□□ -0.74
TRIM44-202ENST00000532066 DIP2AQ14689 1571 aa10.4□□□□□ -0.74
TRIM44-202ENST00000532066 SEC24BO95487 1268 aa10.4□□□□□ -0.74
TRIM44-202ENST00000532066 CEBPAP49715 358 aaPredicted RBP10.4□□□□□ -0.74
TRIM44-202ENST00000532066 IFNL1Q8IU54 200 aa10.4□□□□□ -0.74
TRIM44-202ENST00000532066 DNAJC5Q9H3Z4 198 aa10.4□□□□□ -0.74
TRIM44-202ENST00000532066 PIK3R4Q99570 1358 aa10.39□□□□□ -0.75
TRIM44-202ENST00000532066 LTKP29376 864 aa10.39□□□□□ -0.75
TRIM44-202ENST00000532066 MTHFSP49914 203 aa10.39□□□□□ -0.75
TRIM44-202ENST00000532066 RUNDC1Q96C34 613 aa10.39□□□□□ -0.75
TRIM44-202ENST00000532066 PLEKHH1Q9ULM0 1364 aa10.39□□□□□ -0.75
TRIM44-202ENST00000532066 CD163L1Q9NR16 1453 aa10.38□□□□□ -0.75
TRIM44-202ENST00000532066 FYB1O15117 783 aa10.38□□□□□ -0.75
TRIM44-202ENST00000532066 NUDT16Q96DE0 195 aaKnown RBP10.38□□□□□ -0.75
TRIM44-202ENST00000532066 PCDH10Q9P2E7 1040 aa10.38□□□□□ -0.75
TRIM44-202ENST00000532066 SALL2Q9Y467 1007 aaPredicted RBP10.38□□□□□ -0.75
TRIM44-202ENST00000532066 EDC4Q6P2E9 1401 aaKnown RBP10.38□□□□□ -0.75
TRIM44-202ENST00000532066 ZNF521Q96K83 1311 aa10.37□□□□□ -0.75
TRIM44-202ENST00000532066 E9PSI1 815 aa10.37□□□□□ -0.75
TRIM44-202ENST00000532066 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.37□□□□□ -0.75
TRIM44-202ENST00000532066 FBXO3Q9UK99 471 aa10.37□□□□□ -0.75
TRIM44-202ENST00000532066 ADGRB2O60241 1585 aa10.36□□□□□ -0.75
TRIM44-202ENST00000532066 CPSF1Q10570 1443 aaKnown RBP10.36□□□□□ -0.75
TRIM44-202ENST00000532066 PTCH1Q13635 1447 aa10.36□□□□□ -0.75
TRIM44-202ENST00000532066 PPIP5K1Q6PFW1 1433 aa10.36□□□□□ -0.75
TRIM44-202ENST00000532066 APAF1O14727 1248 aa10.36□□□□□ -0.75
TRIM44-202ENST00000532066 TNNT2P45379 298 aaPredicted RBP10.36□□□□□ -0.75
TRIM44-202ENST00000532066 RRP1P56182 461 aaKnown RBP10.36□□□□□ -0.75
TRIM44-202ENST00000532066 CCDC27Q2M243 656 aa10.36□□□□□ -0.75
TRIM44-202ENST00000532066 IRX6P78412 446 aaPredicted RBP10.35□□□□□ -0.75
TRIM44-202ENST00000532066 SLFN5Q08AF3 891 aa10.35□□□□□ -0.75
TRIM44-202ENST00000532066 LCE2DQ5TA82 110 aaPredicted RBP10.35□□□□□ -0.75
TRIM44-202ENST00000532066 ANKLE2Q86XL3 938 aa10.35□□□□□ -0.75
TRIM44-202ENST00000532066 GGNBP2Q9H3C7 697 aa10.35□□□□□ -0.75
TRIM44-202ENST00000532066 ROBO2Q9HCK4 1378 aa10.35□□□□□ -0.75
TRIM44-202ENST00000532066 ANKRD26Q9UPS8 1709 aa10.34□□□□□ -0.75
TRIM44-202ENST00000532066 PLEKHG3A1L390 1219 aa10.34□□□□□ -0.75
TRIM44-202ENST00000532066 WDR63Q8IWG1 891 aa10.34□□□□□ -0.75
TRIM44-202ENST00000532066 CCDC146Q8IYE0 955 aa10.34□□□□□ -0.75
TRIM44-202ENST00000532066 TRMT2AQ8IZ69 625 aaKnown RBP10.34□□□□□ -0.75
TRIM44-202ENST00000532066 FAM163AQ96GL9 167 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms