RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 TXNDC2Q86VQ3 553 aa10.95□□□□□ -0.66
TRIM53CP-201ENST00000531490 KCNK17Q96T54 332 aa10.95□□□□□ -0.66
TRIM53CP-201ENST00000531490 STRCP1A6NGW2 1772 aa10.94□□□□□ -0.66
TRIM53CP-201ENST00000531490 DMRTA1Q5VZB9 504 aa10.94□□□□□ -0.66
TRIM53CP-201ENST00000531490 CAMSAP2Q08AD1 1489 aa10.94□□□□□ -0.66
TRIM53CP-201ENST00000531490 TSPY4P0CV99 314 aa10.93□□□□□ -0.66
TRIM53CP-201ENST00000531490 TSPY10P0CW01 314 aa10.93□□□□□ -0.66
TRIM53CP-201ENST00000531490 VSIG10Q8N0Z9 540 aa10.93□□□□□ -0.66
TRIM53CP-201ENST00000531490 EPAS1Q99814 870 aa10.93□□□□□ -0.66
TRIM53CP-201ENST00000531490 DEPDC5O75140 1603 aa10.93□□□□□ -0.66
TRIM53CP-201ENST00000531490 ERVK-7P63135 1459 aa10.93□□□□□ -0.66
TRIM53CP-201ENST00000531490 LRRC9Q6ZRR7 1453 aa10.93□□□□□ -0.66
TRIM53CP-201ENST00000531490 ABCC3O15438 1527 aa10.92□□□□□ -0.66
TRIM53CP-201ENST00000531490 FBXW7Q969H0 707 aa10.92□□□□□ -0.66
TRIM53CP-201ENST00000531490 IQGAP1P46940 1657 aa10.92□□□□□ -0.66
TRIM53CP-201ENST00000531490 NCOA2Q15596 1464 aa10.92□□□□□ -0.66
TRIM53CP-201ENST00000531490 EHBP1L1Q8N3D4 1523 aa10.92□□□□□ -0.66
TRIM53CP-201ENST00000531490 PTPREP23469 700 aa10.91□□□□□ -0.66
TRIM53CP-201ENST00000531490 RSPH4AQ5TD94 716 aa10.91□□□□□ -0.66
TRIM53CP-201ENST00000531490 SCAF11Q99590 1463 aaKnown RBP10.91□□□□□ -0.66
TRIM53CP-201ENST00000531490 RNF17Q9BXT8 1623 aaKnown RBP10.91□□□□□ -0.66
TRIM53CP-201ENST00000531490 MMRN1Q13201 1228 aa10.9□□□□□ -0.66
TRIM53CP-201ENST00000531490 TMEM94Q12767 1356 aa10.9□□□□□ -0.66
TRIM53CP-201ENST00000531490 GRXCR2A6NFK2 248 aa10.9□□□□□ -0.67
TRIM53CP-201ENST00000531490 NBR1Q14596 966 aa10.9□□□□□ -0.67
TRIM53CP-201ENST00000531490 SLC26A8Q96RN1 970 aa10.89□□□□□ -0.67
TRIM53CP-201ENST00000531490 FAM135BQ49AJ0 1406 aa10.89□□□□□ -0.67
TRIM53CP-201ENST00000531490 MAP3K1Q13233 1512 aa10.88□□□□□ -0.67
TRIM53CP-201ENST00000531490 ADGRD1Q6QNK2 874 aa10.88□□□□□ -0.67
TRIM53CP-201ENST00000531490 EID1Q9Y6B2 187 aa10.88□□□□□ -0.67
TRIM53CP-201ENST00000531490 SRCAPQ6ZRS2 3230 aa10.87□□□□□ -0.67
TRIM53CP-201ENST00000531490 SYNMO15061 1565 aa10.87□□□□□ -0.67
TRIM53CP-201ENST00000531490 TK2O00142 265 aa10.87□□□□□ -0.67
TRIM53CP-201ENST00000531490 PRIM1P49642 420 aaKnown RBP10.87□□□□□ -0.67
TRIM53CP-201ENST00000531490 PROSER2Q86WR7 435 aaPredicted RBP10.87□□□□□ -0.67
TRIM53CP-201ENST00000531490 ARHGAP23Q9P227 1491 aa10.86□□□□□ -0.67
TRIM53CP-201ENST00000531490 EN1Q05925 392 aaPredicted RBP10.86□□□□□ -0.67
TRIM53CP-201ENST00000531490 C6orf132Q5T0Z8 1188 aa10.86□□□□□ -0.67
TRIM53CP-201ENST00000531490 PPARGC1BQ86YN6 1023 aaKnown RBP10.86□□□□□ -0.67
TRIM53CP-201ENST00000531490 ZC3H13Q5T200 1668 aaKnown RBP10.86□□□□□ -0.67
TRIM53CP-201ENST00000531490 TMEM2Q9UHN6 1383 aa10.85□□□□□ -0.67
TRIM53CP-201ENST00000531490 KCNA6P17658 529 aa10.85□□□□□ -0.67
TRIM53CP-201ENST00000531490 COL9A1P20849 921 aa10.85□□□□□ -0.67
TRIM53CP-201ENST00000531490 OSBPP22059 807 aa10.85□□□□□ -0.67
TRIM53CP-201ENST00000531490 MROH1Q8NDA8 1641 aa10.84□□□□□ -0.67
TRIM53CP-201ENST00000531490 PPP1R3GB7ZBB8 358 aa10.84□□□□□ -0.67
TRIM53CP-201ENST00000531490 MLLT3P42568 568 aaPredicted RBP10.84□□□□□ -0.67
TRIM53CP-201ENST00000531490 IDI1Q13907 227 aa10.84□□□□□ -0.67
TRIM53CP-201ENST00000531490 ZBED2Q9BTP6 218 aa10.84□□□□□ -0.67
TRIM53CP-201ENST00000531490 SLC4A5Q9BY07 1137 aa10.84□□□□□ -0.67
TRIM53CP-201ENST00000531490 RRP7BPQ9NSQ0 103 aa10.84□□□□□ -0.67
TRIM53CP-201ENST00000531490 VPS9D1Q9Y2B5 631 aa10.84□□□□□ -0.67
TRIM53CP-201ENST00000531490 ARHGEF5Q12774 1597 aa10.84□□□□□ -0.67
TRIM53CP-201ENST00000531490 SLIT1O75093 1534 aa10.84□□□□□ -0.67
TRIM53CP-201ENST00000531490 TSR1Q2NL82 804 aaKnown RBP10.83□□□□□ -0.68
TRIM53CP-201ENST00000531490 UBR1Q8IWV7 1749 aa10.82□□□□□ -0.68
TRIM53CP-201ENST00000531490 MAP3K7O43318 606 aa10.82□□□□□ -0.68
TRIM53CP-201ENST00000531490 HRO43593 1189 aa10.82□□□□□ -0.68
TRIM53CP-201ENST00000531490 TRIM52Q96A61 297 aa10.82□□□□□ -0.68
TRIM53CP-201ENST00000531490 SLAIN2Q9P270 581 aa10.82□□□□□ -0.68
TRIM53CP-201ENST00000531490 SEMA3EO15041 775 aa10.81□□□□□ -0.68
TRIM53CP-201ENST00000531490 BCANQ96GW7 911 aa10.81□□□□□ -0.68
TRIM53CP-201ENST00000531490 MYOM3Q5VTT5 1437 aa10.81□□□□□ -0.68
TRIM53CP-201ENST00000531490 KIF15Q9NS87 1388 aa10.81□□□□□ -0.68
TRIM53CP-201ENST00000531490 XIRP1Q702N8 1843 aaKnown RBP10.8□□□□□ -0.68
TRIM53CP-201ENST00000531490 SETD1AO15047 1707 aaKnown RBP10.79□□□□□ -0.68
TRIM53CP-201ENST00000531490 ARHGAP31Q2M1Z3 1444 aa10.79□□□□□ -0.68
TRIM53CP-201ENST00000531490 ROBO1Q9Y6N7 1651 aa10.79□□□□□ -0.68
TRIM53CP-201ENST00000531490 JCADQ9P266 1359 aa10.79□□□□□ -0.68
TRIM53CP-201ENST00000531490 PROX2Q3B8N5 592 aa10.78□□□□□ -0.68
TRIM53CP-201ENST00000531490 MSH6P52701 1360 aa10.78□□□□□ -0.68
TRIM53CP-201ENST00000531490 LRP6O75581 1613 aa10.78□□□□□ -0.68
TRIM53CP-201ENST00000531490 CHIC2Q9UKJ5 165 aa10.77□□□□□ -0.68
TRIM53CP-201ENST00000531490 CEP152O94986 1710 aa10.77□□□□□ -0.68
TRIM53CP-201ENST00000531490 CFAP65Q6ZU64 1925 aaKnown RBP10.77□□□□□ -0.68
TRIM53CP-201ENST00000531490 MAST1Q9Y2H9 1570 aa10.77□□□□□ -0.69
TRIM53CP-201ENST00000531490 PRDM15P57071 1507 aaPredicted RBP10.77□□□□□ -0.69
TRIM53CP-201ENST00000531490 DUOX2Q9NRD8 1548 aa10.77□□□□□ -0.69
TRIM53CP-201ENST00000531490 PIK3C2BO00750 1634 aa10.77□□□□□ -0.69
TRIM53CP-201ENST00000531490 MEX3CQ5U5Q3 659 aaKnown RBP10.77□□□□□ -0.69
TRIM53CP-201ENST00000531490 RNF166Q96A37 237 aaPredicted RBP10.77□□□□□ -0.69
TRIM53CP-201ENST00000531490 ABCC5O15440 1437 aa10.76□□□□□ -0.69
TRIM53CP-201ENST00000531490 EFCAB6Q5THR3 1501 aa10.76□□□□□ -0.69
TRIM53CP-201ENST00000531490 TET3O43151 1660 aa10.76□□□□□ -0.69
TRIM53CP-201ENST00000531490 BHMG1C9JSJ3 638 aaPredicted RBP10.76□□□□□ -0.69
TRIM53CP-201ENST00000531490 EIF2AK4Q9P2K8 1649 aaKnown RBP10.75□□□□□ -0.69
TRIM53CP-201ENST00000531490 NUTM2DQ5VT03 806 aaPredicted RBP10.75□□□□□ -0.69
TRIM53CP-201ENST00000531490 CDHR5Q9HBB8 845 aa10.75□□□□□ -0.69
TRIM53CP-201ENST00000531490 PTPN23Q9H3S7 1636 aa10.75□□□□□ -0.69
TRIM53CP-201ENST00000531490 FGD6Q6ZV73 1430 aa10.74□□□□□ -0.69
TRIM53CP-201ENST00000531490 TESPA1A2RU30 521 aaPredicted RBP10.74□□□□□ -0.69
TRIM53CP-201ENST00000531490 NUTM2BA6NNL0 878 aaPredicted RBP10.74□□□□□ -0.69
TRIM53CP-201ENST00000531490 NUTM2EB1AL46 878 aaPredicted RBP10.74□□□□□ -0.69
TRIM53CP-201ENST00000531490 FAM50AQ14320 339 aaKnown RBP10.74□□□□□ -0.69
TRIM53CP-201ENST00000531490 ZNF772Q68DY9 489 aaPredicted RBP10.74□□□□□ -0.69
TRIM53CP-201ENST00000531490 C14orf37Q86TY3 774 aa10.74□□□□□ -0.69
TRIM53CP-201ENST00000531490 NUTM2AQ8IVF1 878 aaPredicted RBP10.74□□□□□ -0.69
TRIM53CP-201ENST00000531490 ERBINQ96RT1 1412 aa10.74□□□□□ -0.69
TRIM53CP-201ENST00000531490 KANK1Q14678 1352 aa10.73□□□□□ -0.69
TRIM53CP-201ENST00000531490 STAC3Q96MF2 364 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms