RNA–Protein interactions for RNA: ENST00000529637.5

USP48-213, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-213ENST00000529637 FBXO31Q5XUX0 539 aaPredicted RBP17.9■□□□□ 0.46
USP48-213ENST00000529637 PMFBP1Q8TBY8 1022 aa17.89■□□□□ 0.46
USP48-213ENST00000529637 C22orf23Q9BZE7 217 aa17.89■□□□□ 0.46
USP48-213ENST00000529637 SMC4Q9NTJ3 1288 aa17.89■□□□□ 0.46
USP48-213ENST00000529637 TERF2IPQ9NYB0 399 aa17.89■□□□□ 0.46
USP48-213ENST00000529637 ADGRB1O14514 1584 aa17.89■□□□□ 0.45
USP48-213ENST00000529637 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.88■□□□□ 0.45
USP48-213ENST00000529637 SLC52A1Q9NWF4 448 aa17.88■□□□□ 0.45
USP48-213ENST00000529637 MLECQ14165 292 aa17.87■□□□□ 0.45
USP48-213ENST00000529637 ZNF692Q9BU19 519 aaPredicted RBP17.87■□□□□ 0.45
USP48-213ENST00000529637 PPLO60437 1756 aa17.87■□□□□ 0.45
USP48-213ENST00000529637 CYB5RLQ6IPT4 315 aa17.87■□□□□ 0.45
USP48-213ENST00000529637 A0A1W2PP64 1363 aa17.87■□□□□ 0.45
USP48-213ENST00000529637 NINLQ9Y2I6 1382 aa17.87■□□□□ 0.45
USP48-213ENST00000529637 MYO3AQ8NEV4 1616 aa17.87■□□□□ 0.45
USP48-213ENST00000529637 EXOSC9Q06265 439 aaKnown RBP17.87■□□□□ 0.45
USP48-213ENST00000529637 HDGFL2Q7Z4V5 671 aaPredicted RBP17.86■□□□□ 0.45
USP48-213ENST00000529637 GLI2P10070 1586 aa17.86■□□□□ 0.45
USP48-213ENST00000529637 ZKSCAN2Q63HK3 967 aa17.85■□□□□ 0.45
USP48-213ENST00000529637 RWDD1Q9H446 243 aaPredicted RBP17.85■□□□□ 0.45
USP48-213ENST00000529637 ITPRIPQ8IWB1 547 aa17.84■□□□□ 0.45
USP48-213ENST00000529637 YEATS2Q9ULM3 1422 aa17.84■□□□□ 0.45
USP48-213ENST00000529637 FBLN1P23142 703 aa17.84■□□□□ 0.45
USP48-213ENST00000529637 TMPOP42166 694 aaKnown RBP17.84■□□□□ 0.45
USP48-213ENST00000529637 RIPK4P57078 832 aa17.83■□□□□ 0.45
USP48-213ENST00000529637 DZIP1LQ8IYY4 767 aaKnown RBP17.83■□□□□ 0.45
USP48-213ENST00000529637 CABP1Q9NZU7 370 aa17.83■□□□□ 0.45
USP48-213ENST00000529637 CFAP74Q9C0B2 1584 aa17.83■□□□□ 0.45
USP48-213ENST00000529637 TULP4Q9NRJ4 1543 aa17.83■□□□□ 0.45
USP48-213ENST00000529637 FYB1O15117 783 aa17.83■□□□□ 0.44
USP48-213ENST00000529637 CCDC27Q2M243 656 aa17.83■□□□□ 0.44
USP48-213ENST00000529637 PHF23Q9BUL5 403 aaPredicted RBP17.83■□□□□ 0.44
USP48-213ENST00000529637 CDK19Q9BWU1 502 aa17.83■□□□□ 0.44
USP48-213ENST00000529637 NSD2O96028 1365 aa17.82■□□□□ 0.44
USP48-213ENST00000529637 DIAPH1O60610 1272 aaKnown RBP17.82■□□□□ 0.44
USP48-213ENST00000529637 TRIM44Q96DX7 344 aaPredicted RBP17.81■□□□□ 0.44
USP48-213ENST00000529637 PUS7Q96PZ0 661 aaKnown RBP17.81■□□□□ 0.44
USP48-213ENST00000529637 CAMSAP1Q5T5Y3 1602 aa17.81■□□□□ 0.44
USP48-213ENST00000529637 MVPQ14764 893 aaKnown RBP17.81■□□□□ 0.44
USP48-213ENST00000529637 TNPO1Q92973 898 aaKnown RBP17.81■□□□□ 0.44
USP48-213ENST00000529637 SHPRHQ149N8 1683 aa17.8■□□□□ 0.44
USP48-213ENST00000529637 DDX11L8A8MPP1 907 aa17.79■□□□□ 0.44
USP48-213ENST00000529637 WAPLQ7Z5K2 1190 aa17.79■□□□□ 0.44
USP48-213ENST00000529637 SSH1Q8WYL5 1049 aa17.79■□□□□ 0.44
USP48-213ENST00000529637 ATAD2Q6PL18 1390 aa17.79■□□□□ 0.44
USP48-213ENST00000529637 HSCBQ8IWL3 235 aa17.79■□□□□ 0.44
USP48-213ENST00000529637 FOXD4L1Q9NU39 408 aa17.79■□□□□ 0.44
USP48-213ENST00000529637 NEXMIFQ5QGS0 1516 aa17.79■□□□□ 0.44
USP48-213ENST00000529637 IQSEC2Q5JU85 1478 aa17.78■□□□□ 0.44
USP48-213ENST00000529637 DDIT3P35638 169 aa17.78■□□□□ 0.44
USP48-213ENST00000529637 SIGLEC1Q9BZZ2 1709 aa17.78■□□□□ 0.44
USP48-213ENST00000529637 NEO1Q92859 1461 aa17.78■□□□□ 0.44
USP48-213ENST00000529637 ABCC11Q96J66 1382 aa17.78■□□□□ 0.44
USP48-213ENST00000529637 FAM69CQ0P6D2 419 aa17.77■□□□□ 0.44
USP48-213ENST00000529637 ZC3H13Q5T200 1668 aaKnown RBP17.77■□□□□ 0.43
USP48-213ENST00000529637 HMOX1P09601 288 aa17.77■□□□□ 0.43
USP48-213ENST00000529637 TRIM27P14373 513 aa17.77■□□□□ 0.43
USP48-213ENST00000529637 NOB1Q9ULX3 412 aaKnown RBP17.77■□□□□ 0.43
USP48-213ENST00000529637 TRIM35Q9UPQ4 493 aa17.77■□□□□ 0.43
USP48-213ENST00000529637 KIAA1211Q6ZU35 1233 aa17.76■□□□□ 0.43
USP48-213ENST00000529637 ZMYM3Q14202 1370 aa17.76■□□□□ 0.43
USP48-213ENST00000529637 AAMPQ13685 434 aa17.76■□□□□ 0.43
USP48-213ENST00000529637 YTHDC2Q9H6S0 1430 aaKnown RBP17.75■□□□□ 0.43
USP48-213ENST00000529637 DIP2CQ9Y2E4 1556 aa17.75■□□□□ 0.43
USP48-213ENST00000529637 ARHGEF28Q8N1W1 1705 aaKnown RBP17.75■□□□□ 0.43
USP48-213ENST00000529637 PRKAR2BP31323 418 aa17.75■□□□□ 0.43
USP48-213ENST00000529637 PLEKHF1Q96S99 279 aa17.74■□□□□ 0.43
USP48-213ENST00000529637 ATF7IPQ6VMQ6 1270 aa17.74■□□□□ 0.43
USP48-213ENST00000529637 ELL2O00472 640 aaPredicted RBP17.74■□□□□ 0.43
USP48-213ENST00000529637 CD2BP2O95400 341 aaKnown RBP17.73■□□□□ 0.43
USP48-213ENST00000529637 THUMPD2Q9BTF0 503 aaKnown RBP17.73■□□□□ 0.43
USP48-213ENST00000529637 RBM10P98175 930 aaKnown RBP17.73■□□□□ 0.43
USP48-213ENST00000529637 DDX19BQ9UMR2 479 aa17.73■□□□□ 0.43
USP48-213ENST00000529637 NCOA3Q9Y6Q9 1424 aa17.72■□□□□ 0.43
USP48-213ENST00000529637 TMEM57Q8N5G2 664 aa17.72■□□□□ 0.43
USP48-213ENST00000529637 PIK3C2BO00750 1634 aa17.72■□□□□ 0.43
USP48-213ENST00000529637 ESF1Q9H501 851 aaKnown RBP17.71■□□□□ 0.43
USP48-213ENST00000529637 ARHGAP31Q2M1Z3 1444 aa17.71■□□□□ 0.43
USP48-213ENST00000529637 TPM2P07951 284 aa17.71■□□□□ 0.43
USP48-213ENST00000529637 PDCL3Q9H2J4 239 aa17.71■□□□□ 0.43
USP48-213ENST00000529637 IPO8O15397 1037 aaKnown RBP17.7■□□□□ 0.42
USP48-213ENST00000529637 CT47B1P0C2W7 299 aaPredicted RBP17.7■□□□□ 0.42
USP48-213ENST00000529637 ISY1Q9ULR0 285 aaKnown RBP17.7■□□□□ 0.42
USP48-213ENST00000529637 RAB3GAP1Q15042 981 aa17.7■□□□□ 0.42
USP48-213ENST00000529637 HSP90AB1P08238 724 aaKnown RBP17.69■□□□□ 0.42
USP48-213ENST00000529637 USP32Q8NFA0 1604 aa17.69■□□□□ 0.42
USP48-213ENST00000529637 SMC5Q8IY18 1101 aa17.68■□□□□ 0.42
USP48-213ENST00000529637 RBM42Q9BTD8 480 aaKnown RBP17.68■□□□□ 0.42
USP48-213ENST00000529637 EMILIN1Q9Y6C2 1016 aa17.68■□□□□ 0.42
USP48-213ENST00000529637 PTPRMP28827 1452 aa17.68■□□□□ 0.42
USP48-213ENST00000529637 MYO5BQ9ULV0 1848 aa17.68■□□□□ 0.42
USP48-213ENST00000529637 ZFYVE9O95405 1425 aa17.68■□□□□ 0.42
USP48-213ENST00000529637 TXNDC2Q86VQ3 553 aa17.68■□□□□ 0.42
USP48-213ENST00000529637 POLKQ9UBT6 870 aa17.68■□□□□ 0.42
USP48-213ENST00000529637 KIF2CQ99661 725 aa17.67■□□□□ 0.42
USP48-213ENST00000529637 FCHSD2O94868 740 aa17.67■□□□□ 0.42
USP48-213ENST00000529637 RBM25P49756 843 aaKnown RBP17.67■□□□□ 0.42
USP48-213ENST00000529637 GBP4Q96PP9 640 aa17.67■□□□□ 0.42
USP48-213ENST00000529637 ZRANB1Q9UGI0 708 aa17.67■□□□□ 0.42
USP48-213ENST00000529637 SSFA2P28290 1259 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms