RNA–Protein interactions for RNA: ENST00000529611.5

CCDC90B-213, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2 BASIC

Gene CCDC90B, Length 1,986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-213ENST00000529611 NRKQ7Z2Y5 1582 aa20.41■□□□□ 0.86
CCDC90B-213ENST00000529611 PNPLA6Q8IY17 1366 aa20.41■□□□□ 0.86
CCDC90B-213ENST00000529611 ACEP12821 1306 aa20.41■□□□□ 0.86
CCDC90B-213ENST00000529611 NGEFQ8N5V2 710 aa20.41■□□□□ 0.86
CCDC90B-213ENST00000529611 NPHP4O75161 1426 aaPredicted RBP20.4■□□□□ 0.86
CCDC90B-213ENST00000529611 RUNDC1Q96C34 613 aa20.39■□□□□ 0.86
CCDC90B-213ENST00000529611 IQSEC2Q5JU85 1478 aa20.39■□□□□ 0.85
CCDC90B-213ENST00000529611 GOLGA2Q08379 1002 aa20.39■□□□□ 0.85
CCDC90B-213ENST00000529611 ZRANB1Q9UGI0 708 aa20.39■□□□□ 0.85
CCDC90B-213ENST00000529611 RCAN3Q9UKA8 241 aa20.39■□□□□ 0.85
CCDC90B-213ENST00000529611 USP6P35125 1406 aa20.38■□□□□ 0.85
CCDC90B-213ENST00000529611 POLKQ9UBT6 870 aa20.37■□□□□ 0.85
CCDC90B-213ENST00000529611 U2AF1L5P0DN76 240 aaPredicted RBP20.37■□□□□ 0.85
CCDC90B-213ENST00000529611 FBLN1P23142 703 aa20.37■□□□□ 0.85
CCDC90B-213ENST00000529611 U2AF1Q01081 240 aaKnown RBP eCLIP20.37■□□□□ 0.85
CCDC90B-213ENST00000529611 TTC21BQ7Z4L5 1316 aa20.36■□□□□ 0.85
CCDC90B-213ENST00000529611 RGPD8O14715 1765 aaPredicted RBP20.36■□□□□ 0.85
CCDC90B-213ENST00000529611 DUSP27Q5VZP5 1158 aa20.36■□□□□ 0.85
CCDC90B-213ENST00000529611 COG3Q96JB2 828 aa20.36■□□□□ 0.85
CCDC90B-213ENST00000529611 MAP2P11137 1827 aaKnown RBP20.36■□□□□ 0.85
CCDC90B-213ENST00000529611 ANKARQ7Z5J8 1434 aa20.36■□□□□ 0.85
CCDC90B-213ENST00000529611 AATKQ6ZMQ8 1374 aa20.35■□□□□ 0.85
CCDC90B-213ENST00000529611 FMN2Q9NZ56 1722 aa20.35■□□□□ 0.85
CCDC90B-213ENST00000529611 SSH2Q76I76 1423 aa20.34■□□□□ 0.85
CCDC90B-213ENST00000529611 SLFN5Q08AF3 891 aa20.34■□□□□ 0.85
CCDC90B-213ENST00000529611 TCP11L2Q8N4U5 519 aa20.34■□□□□ 0.85
CCDC90B-213ENST00000529611 NALCNQ8IZF0 1738 aa20.34■□□□□ 0.85
CCDC90B-213ENST00000529611 DIAPH1O60610 1272 aaKnown RBP20.34■□□□□ 0.85
CCDC90B-213ENST00000529611 TRMT2AQ8IZ69 625 aaKnown RBP20.33■□□□□ 0.84
CCDC90B-213ENST00000529611 PMFBP1Q8TBY8 1022 aa20.33■□□□□ 0.84
CCDC90B-213ENST00000529611 U2SURPO15042 1029 aaKnown RBP20.32■□□□□ 0.84
CCDC90B-213ENST00000529611 RRP1P56182 461 aaKnown RBP20.32■□□□□ 0.84
CCDC90B-213ENST00000529611 WWC1Q8IX03 1113 aa20.32■□□□□ 0.84
CCDC90B-213ENST00000529611 SPINK5Q9NQ38 1064 aaPredicted RBP20.32■□□□□ 0.84
CCDC90B-213ENST00000529611 EMILIN1Q9Y6C2 1016 aa20.32■□□□□ 0.84
CCDC90B-213ENST00000529611 OVOS2A0A0J9YW53 1432 aa20.31■□□□□ 0.84
CCDC90B-213ENST00000529611 OVOS2Q6IE36 1432 aa20.31■□□□□ 0.84
CCDC90B-213ENST00000529611 PHF23Q9BUL5 403 aaPredicted RBP20.31■□□□□ 0.84
CCDC90B-213ENST00000529611 PPP4R2Q9NY27 417 aa20.31■□□□□ 0.84
CCDC90B-213ENST00000529611 DMRT2Q9Y5R5 561 aa20.31■□□□□ 0.84
CCDC90B-213ENST00000529611 CDK12Q9NYV4 1490 aaPredicted RBP20.31■□□□□ 0.84
CCDC90B-213ENST00000529611 PPM1GO15355 546 aaPredicted RBP20.3■□□□□ 0.84
CCDC90B-213ENST00000529611 RRP7AQ9Y3A4 280 aaKnown RBP20.3■□□□□ 0.84
CCDC90B-213ENST00000529611 PLEKHF1Q96S99 279 aa20.3■□□□□ 0.84
CCDC90B-213ENST00000529611 E9PSI1 815 aa20.29■□□□□ 0.84
CCDC90B-213ENST00000529611 NGDNQ8NEJ9 315 aaKnown RBP20.29■□□□□ 0.84
CCDC90B-213ENST00000529611 ADGRL3Q9HAR2 1447 aa20.29■□□□□ 0.84
CCDC90B-213ENST00000529611 NEUROD2Q15784 382 aa20.28■□□□□ 0.84
CCDC90B-213ENST00000529611 NCBP3Q53F19 620 aaKnown RBP20.28■□□□□ 0.84
CCDC90B-213ENST00000529611 PELP1Q8IZL8 1130 aaKnown RBP20.28■□□□□ 0.84
CCDC90B-213ENST00000529611 NWD1Q149M9 1564 aa20.28■□□□□ 0.84
CCDC90B-213ENST00000529611 RBM33Q96EV2 1170 aaKnown RBP20.28■□□□□ 0.84
CCDC90B-213ENST00000529611 TTC21AQ8NDW8 1320 aa20.28■□□□□ 0.84
CCDC90B-213ENST00000529611 RRS1Q15050 365 aaKnown RBP20.27■□□□□ 0.84
CCDC90B-213ENST00000529611 CCDC27Q2M243 656 aa20.27■□□□□ 0.84
CCDC90B-213ENST00000529611 USP31Q70CQ4 1352 aa20.25■□□□□ 0.83
CCDC90B-213ENST00000529611 LRRC7Q96NW7 1537 aa20.23■□□□□ 0.83
CCDC90B-213ENST00000529611 IL13P35225 146 aa20.23■□□□□ 0.83
CCDC90B-213ENST00000529611 FCHSD2O94868 740 aa20.23■□□□□ 0.83
CCDC90B-213ENST00000529611 WDR63Q8IWG1 891 aa20.23■□□□□ 0.83
CCDC90B-213ENST00000529611 PIK3C2AO00443 1686 aa20.22■□□□□ 0.83
CCDC90B-213ENST00000529611 MAPK8IP3Q9UPT6 1336 aa20.22■□□□□ 0.83
CCDC90B-213ENST00000529611 TMPOP42166 694 aaKnown RBP20.21■□□□□ 0.83
CCDC90B-213ENST00000529611 RSPH6AQ9H0K4 717 aa20.21■□□□□ 0.83
CCDC90B-213ENST00000529611 PNNQ9H307 717 aaKnown RBP20.21■□□□□ 0.83
CCDC90B-213ENST00000529611 B4GALNT3Q6L9W6 998 aa20.19■□□□□ 0.82
CCDC90B-213ENST00000529611 PHF8Q9UPP1 1060 aa20.19■□□□□ 0.82
CCDC90B-213ENST00000529611 PLIN1O60240 522 aa20.19■□□□□ 0.82
CCDC90B-213ENST00000529611 PEAK1Q9H792 1746 aa20.18■□□□□ 0.82
CCDC90B-213ENST00000529611 PRKAR2BP31323 418 aa20.17■□□□□ 0.82
CCDC90B-213ENST00000529611 C14orf37Q86TY3 774 aa20.17■□□□□ 0.82
CCDC90B-213ENST00000529611 TRIM35Q9UPQ4 493 aa20.17■□□□□ 0.82
CCDC90B-213ENST00000529611 HMOX1P09601 288 aa20.16■□□□□ 0.82
CCDC90B-213ENST00000529611 USP54Q70EL1 1684 aa20.16■□□□□ 0.82
CCDC90B-213ENST00000529611 PROSER2Q86WR7 435 aaPredicted RBP20.15■□□□□ 0.82
CCDC90B-213ENST00000529611 MARF1Q9Y4F3 1742 aaKnown RBP20.15■□□□□ 0.82
CCDC90B-213ENST00000529611 KDM4FA0A1W2PPD8 638 aa20.15■□□□□ 0.82
CCDC90B-213ENST00000529611 EXOC6Q8TAG9 804 aa20.15■□□□□ 0.82
CCDC90B-213ENST00000529611 SOX12O15370 315 aa20.14■□□□□ 0.81
CCDC90B-213ENST00000529611 HSPA2P54652 639 aa20.14■□□□□ 0.81
CCDC90B-213ENST00000529611 EIF4A2Q14240 407 aaKnown RBP20.14■□□□□ 0.81
CCDC90B-213ENST00000529611 RIPK4P57078 832 aa20.14■□□□□ 0.81
CCDC90B-213ENST00000529611 NLRP6P59044 892 aa20.14■□□□□ 0.81
CCDC90B-213ENST00000529611 ESCO1Q5FWF5 840 aa20.14■□□□□ 0.81
CCDC90B-213ENST00000529611 MAP3K19Q56UN5 1328 aa20.13■□□□□ 0.81
CCDC90B-213ENST00000529611 PHACTR3Q96KR7 559 aa20.12■□□□□ 0.81
CCDC90B-213ENST00000529611 NEFMP07197 916 aa20.12■□□□□ 0.81
CCDC90B-213ENST00000529611 HSP90AB2PQ58FF8 381 aa20.12■□□□□ 0.81
CCDC90B-213ENST00000529611 MYH16Q9H6N6 1097 aa20.12■□□□□ 0.81
CCDC90B-213ENST00000529611 STRCP1A6NGW2 1772 aa20.11■□□□□ 0.81
CCDC90B-213ENST00000529611 ABTB2Q8N961 1025 aa20.11■□□□□ 0.81
CCDC90B-213ENST00000529611 SBNO1A3KN83 1393 aa20.11■□□□□ 0.81
CCDC90B-213ENST00000529611 PAK3O75914 559 aaPredicted RBP20.1■□□□□ 0.81
CCDC90B-213ENST00000529611 CCDC136Q96JN2 1154 aa20.1■□□□□ 0.81
CCDC90B-213ENST00000529611 NFE2L2Q16236 605 aa20.1■□□□□ 0.81
CCDC90B-213ENST00000529611 C20orf194Q5TEA3 1177 aa20.1■□□□□ 0.81
CCDC90B-213ENST00000529611 NUTM2GQ5VZR2 741 aa20.1■□□□□ 0.81
CCDC90B-213ENST00000529611 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.1■□□□□ 0.81
CCDC90B-213ENST00000529611 IL16Q14005 1332 aa20.1■□□□□ 0.81
CCDC90B-213ENST00000529611 FLT4P35916 1363 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms