RNA–Protein interactions for RNA: ENST00000528870.5

TRIM29-210, Transcript of tripartite motif containing 29, humanhuman

TSL 2 BASIC

Gene TRIM29, Length 2,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-210ENST00000528870 TMPOP42166 694 aaKnown RBP19.48■□□□□ 0.71
TRIM29-210ENST00000528870 COL3A1P02461 1466 aaPredicted RBP19.48■□□□□ 0.71
TRIM29-210ENST00000528870 YTHDC2Q9H6S0 1430 aaKnown RBP19.48■□□□□ 0.71
TRIM29-210ENST00000528870 FYB1O15117 783 aa19.48■□□□□ 0.71
TRIM29-210ENST00000528870 DZIP1LQ8IYY4 767 aaKnown RBP19.48■□□□□ 0.71
TRIM29-210ENST00000528870 PDZRN3Q9UPQ7 1066 aa19.48■□□□□ 0.71
TRIM29-210ENST00000528870 ZMYM3Q14202 1370 aa19.47■□□□□ 0.71
TRIM29-210ENST00000528870 GSE1Q14687 1217 aa19.47■□□□□ 0.71
TRIM29-210ENST00000528870 SMC4Q9NTJ3 1288 aa19.47■□□□□ 0.71
TRIM29-210ENST00000528870 MED14O60244 1454 aa19.46■□□□□ 0.71
TRIM29-210ENST00000528870 EXOSC9Q06265 439 aaKnown RBP19.46■□□□□ 0.71
TRIM29-210ENST00000528870 HDGFL2Q7Z4V5 671 aaPredicted RBP19.46■□□□□ 0.71
TRIM29-210ENST00000528870 TRIM35Q9UPQ4 493 aa19.46■□□□□ 0.71
TRIM29-210ENST00000528870 ANKRD26Q9UPS8 1709 aa19.46■□□□□ 0.71
TRIM29-210ENST00000528870 CLTCQ00610 1675 aaKnown RBP19.45■□□□□ 0.7
TRIM29-210ENST00000528870 CD163L1Q9NR16 1453 aa19.45■□□□□ 0.7
TRIM29-210ENST00000528870 BECN1Q14457 450 aa19.45■□□□□ 0.7
TRIM29-210ENST00000528870 UPF2Q9HAU5 1272 aaKnown RBP19.45■□□□□ 0.7
TRIM29-210ENST00000528870 NLRP1Q9C000 1473 aa19.43■□□□□ 0.7
TRIM29-210ENST00000528870 DIAPH1O60610 1272 aaKnown RBP19.43■□□□□ 0.7
TRIM29-210ENST00000528870 IL16Q14005 1332 aa19.43■□□□□ 0.7
TRIM29-210ENST00000528870 CDK19Q9BWU1 502 aa19.43■□□□□ 0.7
TRIM29-210ENST00000528870 PNNQ9H307 717 aaKnown RBP19.43■□□□□ 0.7
TRIM29-210ENST00000528870 RIPK4P57078 832 aa19.42■□□□□ 0.7
TRIM29-210ENST00000528870 FBXO31Q5XUX0 539 aaPredicted RBP19.42■□□□□ 0.7
TRIM29-210ENST00000528870 FRAT2O75474 233 aaPredicted RBP19.41■□□□□ 0.7
TRIM29-210ENST00000528870 TRIM27P14373 513 aa19.41■□□□□ 0.7
TRIM29-210ENST00000528870 SSH1Q8WYL5 1049 aa19.41■□□□□ 0.7
TRIM29-210ENST00000528870 STAG3Q9UJ98 1225 aa19.41■□□□□ 0.7
TRIM29-210ENST00000528870 DIP2BQ9P265 1576 aa19.41■□□□□ 0.7
TRIM29-210ENST00000528870 ALKQ9UM73 1620 aa19.41■□□□□ 0.7
TRIM29-210ENST00000528870 CABP1Q9NZU7 370 aa19.4■□□□□ 0.7
TRIM29-210ENST00000528870 ITPRIPQ8IWB1 547 aa19.4■□□□□ 0.7
TRIM29-210ENST00000528870 DDX19BQ9UMR2 479 aa19.4■□□□□ 0.7
TRIM29-210ENST00000528870 ATF7IPQ6VMQ6 1270 aa19.39■□□□□ 0.69
TRIM29-210ENST00000528870 PNPLA6Q8IY17 1366 aa19.38■□□□□ 0.69
TRIM29-210ENST00000528870 NOB1Q9ULX3 412 aaKnown RBP19.38■□□□□ 0.69
TRIM29-210ENST00000528870 ARHGEF40Q8TER5 1519 aa19.38■□□□□ 0.69
TRIM29-210ENST00000528870 TBC1D32Q96NH3 1257 aa19.37■□□□□ 0.69
TRIM29-210ENST00000528870 KIF20BQ96Q89 1820 aa19.37■□□□□ 0.69
TRIM29-210ENST00000528870 HDAC1Q13547 482 aaPredicted RBP19.36■□□□□ 0.69
TRIM29-210ENST00000528870 FCHSD2O94868 740 aa19.35■□□□□ 0.69
TRIM29-210ENST00000528870 FAM69CQ0P6D2 419 aa19.35■□□□□ 0.69
TRIM29-210ENST00000528870 IL27Q8NEV9 243 aa19.35■□□□□ 0.69
TRIM29-210ENST00000528870 KIF16BQ96L93 1317 aa19.35■□□□□ 0.69
TRIM29-210ENST00000528870 IPO8O15397 1037 aaKnown RBP19.35■□□□□ 0.69
TRIM29-210ENST00000528870 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.35■□□□□ 0.69
TRIM29-210ENST00000528870 TMEM57Q8N5G2 664 aa19.33■□□□□ 0.68
TRIM29-210ENST00000528870 SLKQ9H2G2 1235 aaPredicted RBP19.33■□□□□ 0.68
TRIM29-210ENST00000528870 LRRC7Q96NW7 1537 aa19.33■□□□□ 0.68
TRIM29-210ENST00000528870 CDC42BPGQ6DT37 1551 aa19.33■□□□□ 0.68
TRIM29-210ENST00000528870 PRKAR2BP31323 418 aa19.32■□□□□ 0.68
TRIM29-210ENST00000528870 ALDH1L2Q3SY69 923 aa19.31■□□□□ 0.68
TRIM29-210ENST00000528870 ATP7BP35670 1465 aa19.31■□□□□ 0.68
TRIM29-210ENST00000528870 WAPLQ7Z5K2 1190 aa19.31■□□□□ 0.68
TRIM29-210ENST00000528870 RSPH6AQ9H0K4 717 aa19.31■□□□□ 0.68
TRIM29-210ENST00000528870 POLKQ9UBT6 870 aa19.31■□□□□ 0.68
TRIM29-210ENST00000528870 DLC1Q96QB1 1528 aa19.3■□□□□ 0.68
TRIM29-210ENST00000528870 ZBTB40Q9NUA8 1239 aa19.3■□□□□ 0.68
TRIM29-210ENST00000528870 FAM135BQ49AJ0 1406 aa19.3■□□□□ 0.68
TRIM29-210ENST00000528870 SMC5Q8IY18 1101 aa19.29■□□□□ 0.68
TRIM29-210ENST00000528870 TBC1D2Q9BYX2 928 aa19.29■□□□□ 0.68
TRIM29-210ENST00000528870 FBLN1P23142 703 aa19.28■□□□□ 0.68
TRIM29-210ENST00000528870 A2ML1A8K2U0 1454 aa19.28■□□□□ 0.68
TRIM29-210ENST00000528870 RIMS2Q9UQ26 1411 aa19.27■□□□□ 0.68
TRIM29-210ENST00000528870 ZNF428Q96B54 188 aa19.27■□□□□ 0.67
TRIM29-210ENST00000528870 C22orf23Q9BZE7 217 aa19.27■□□□□ 0.67
TRIM29-210ENST00000528870 ANTXR1Q9H6X2 564 aa19.27■□□□□ 0.67
TRIM29-210ENST00000528870 PPP6R1Q9UPN7 881 aa19.27■□□□□ 0.67
TRIM29-210ENST00000528870 HMOX1P09601 288 aa19.26■□□□□ 0.67
TRIM29-210ENST00000528870 MFAP1P55081 439 aaKnown RBP19.26■□□□□ 0.67
TRIM29-210ENST00000528870 NFE2L2Q16236 605 aa19.26■□□□□ 0.67
TRIM29-210ENST00000528870 TSPOAP1O95153 1857 aa19.26■□□□□ 0.67
TRIM29-210ENST00000528870 CALD1Q05682 793 aaKnown RBP19.25■□□□□ 0.67
TRIM29-210ENST00000528870 BRPF3Q9ULD4 1205 aa19.25■□□□□ 0.67
TRIM29-210ENST00000528870 PHACTR3Q96KR7 559 aa19.25■□□□□ 0.67
TRIM29-210ENST00000528870 RTN4Q9NQC3 1192 aaKnown RBP19.24■□□□□ 0.67
TRIM29-210ENST00000528870 PPIP5K1Q6PFW1 1433 aa19.24■□□□□ 0.67
TRIM29-210ENST00000528870 EMILIN1Q9Y6C2 1016 aa19.23■□□□□ 0.67
TRIM29-210ENST00000528870 AGLP35573 1532 aa19.23■□□□□ 0.67
TRIM29-210ENST00000528870 SPATA31D1Q6ZQQ2 1576 aa19.23■□□□□ 0.67
TRIM29-210ENST00000528870 REREQ9P2R6 1566 aa19.23■□□□□ 0.67
TRIM29-210ENST00000528870 EDC4Q6P2E9 1401 aaKnown RBP19.23■□□□□ 0.67
TRIM29-210ENST00000528870 BRPF1P55201 1214 aaPredicted RBP19.23■□□□□ 0.67
TRIM29-210ENST00000528870 NUCB1Q02818 461 aa19.23■□□□□ 0.67
TRIM29-210ENST00000528870 SETD1AO15047 1707 aaKnown RBP19.22■□□□□ 0.67
TRIM29-210ENST00000528870 MAP2P11137 1827 aaKnown RBP19.22■□□□□ 0.67
TRIM29-210ENST00000528870 KIF13AQ9H1H9 1805 aa19.22■□□□□ 0.67
TRIM29-210ENST00000528870 THUMPD2Q9BTF0 503 aaKnown RBP19.22■□□□□ 0.67
TRIM29-210ENST00000528870 WASLO00401 505 aaPredicted RBP19.21■□□□□ 0.67
TRIM29-210ENST00000528870 CPSF1Q10570 1443 aaKnown RBP19.21■□□□□ 0.67
TRIM29-210ENST00000528870 GNAI1P63096 354 aa19.21■□□□□ 0.67
TRIM29-210ENST00000528870 NME9Q86XW9 330 aa19.21■□□□□ 0.67
TRIM29-210ENST00000528870 IL13P35225 146 aa19.2■□□□□ 0.66
TRIM29-210ENST00000528870 CHMP4BQ9H444 224 aaKnown RBP19.2■□□□□ 0.66
TRIM29-210ENST00000528870 IFT57Q9NWB7 429 aa19.2■□□□□ 0.66
TRIM29-210ENST00000528870 VAMP4O75379 141 aa19.2■□□□□ 0.66
TRIM29-210ENST00000528870 MLECQ14165 292 aa19.2■□□□□ 0.66
TRIM29-210ENST00000528870 CDK12Q9NYV4 1490 aaPredicted RBP19.19■□□□□ 0.66
TRIM29-210ENST00000528870 CHD1LQ86WJ1 897 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms