RNA–Protein interactions for RNA: ENST00000528853.1

PPFIA1-212, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-212ENST00000528853 KCNH2Q12809 1159 aa9.96□□□□□ -0.82
PPFIA1-212ENST00000528853 PRPF38BQ5VTL8 546 aaKnown RBP9.96□□□□□ -0.82
PPFIA1-212ENST00000528853 UNC93B1Q9H1C4 597 aa9.96□□□□□ -0.82
PPFIA1-212ENST00000528853 RIC3Q7Z5B4 369 aa9.95□□□□□ -0.82
PPFIA1-212ENST00000528853 NPAS3Q8IXF0 933 aa9.95□□□□□ -0.82
PPFIA1-212ENST00000528853 CTHP32929 405 aa9.93□□□□□ -0.82
PPFIA1-212ENST00000528853 GMPRP36959 345 aa9.93□□□□□ -0.82
PPFIA1-212ENST00000528853 FAM181BA6NEQ2 426 aa9.92□□□□□ -0.82
PPFIA1-212ENST00000528853 IRF7Q92985 503 aa9.92□□□□□ -0.82
PPFIA1-212ENST00000528853 SLC24A3Q9HC58 644 aa9.92□□□□□ -0.82
PPFIA1-212ENST00000528853 PLEKHG3A1L390 1219 aa9.91□□□□□ -0.82
PPFIA1-212ENST00000528853 NUTM2BA6NNL0 878 aaPredicted RBP9.91□□□□□ -0.82
PPFIA1-212ENST00000528853 NUTM2EB1AL46 878 aaPredicted RBP9.91□□□□□ -0.82
PPFIA1-212ENST00000528853 NUTM2DQ5VT03 806 aaPredicted RBP9.91□□□□□ -0.82
PPFIA1-212ENST00000528853 NUTM2AQ8IVF1 878 aaPredicted RBP9.91□□□□□ -0.82
PPFIA1-212ENST00000528853 RSPH6AQ9H0K4 717 aa9.91□□□□□ -0.82
PPFIA1-212ENST00000528853 TLL2Q9Y6L7 1015 aa9.91□□□□□ -0.82
PPFIA1-212ENST00000528853 H3BM21 787 aa9.9□□□□□ -0.82
PPFIA1-212ENST00000528853 HRCP23327 699 aa9.9□□□□□ -0.82
PPFIA1-212ENST00000528853 CSPP1Q1MSJ5 1256 aa9.9□□□□□ -0.82
PPFIA1-212ENST00000528853 LINC01559Q495D7 138 aa9.9□□□□□ -0.82
PPFIA1-212ENST00000528853 LYPD8Q6UX82 237 aa9.9□□□□□ -0.82
PPFIA1-212ENST00000528853 BAP1Q92560 729 aa9.9□□□□□ -0.82
PPFIA1-212ENST00000528853 VARSP26640 1264 aaKnown RBP9.89□□□□□ -0.83
PPFIA1-212ENST00000528853 VEGFBP49765 207 aa9.89□□□□□ -0.83
PPFIA1-212ENST00000528853 TUSC1Q2TAM9 212 aa9.89□□□□□ -0.83
PPFIA1-212ENST00000528853 ZNF511Q8NB15 262 aa9.89□□□□□ -0.83
PPFIA1-212ENST00000528853 ZFP42Q96MM3 310 aa9.89□□□□□ -0.83
PPFIA1-212ENST00000528853 PCDHB15Q9Y5E8 787 aa9.89□□□□□ -0.83
PPFIA1-212ENST00000528853 LORP23490 312 aaPredicted RBP9.88□□□□□ -0.83
PPFIA1-212ENST00000528853 MPNDQ8N594 471 aa9.88□□□□□ -0.83
PPFIA1-212ENST00000528853 ZSCAN1Q8NBB4 408 aa9.88□□□□□ -0.83
PPFIA1-212ENST00000528853 TSC1Q92574 1164 aa9.88□□□□□ -0.83
PPFIA1-212ENST00000528853 BCANQ96GW7 911 aa9.88□□□□□ -0.83
PPFIA1-212ENST00000528853 CFAP99D6REC4 459 aa9.87□□□□□ -0.83
PPFIA1-212ENST00000528853 NNTQ13423 1086 aa9.87□□□□□ -0.83
PPFIA1-212ENST00000528853 MYSM1Q5VVJ2 828 aa9.87□□□□□ -0.83
PPFIA1-212ENST00000528853 HELBQ8NG08 1087 aaPredicted RBP9.87□□□□□ -0.83
PPFIA1-212ENST00000528853 FAM174AQ8TBP5 190 aa9.86□□□□□ -0.83
PPFIA1-212ENST00000528853 ERBB4Q15303 1308 aa9.85□□□□□ -0.83
PPFIA1-212ENST00000528853 ARMC2Q8NEN0 867 aa9.85□□□□□ -0.83
PPFIA1-212ENST00000528853 CABLES1Q8TDN4 633 aa9.85□□□□□ -0.83
PPFIA1-212ENST00000528853 CLK2P49760 499 aaKnown RBP9.84□□□□□ -0.83
PPFIA1-212ENST00000528853 MRPL14Q6P1L8 145 aaKnown RBP9.84□□□□□ -0.83
PPFIA1-212ENST00000528853 TIMP2P16035 220 aa9.83□□□□□ -0.84
PPFIA1-212ENST00000528853 AGERQ15109 404 aa9.83□□□□□ -0.84
PPFIA1-212ENST00000528853 ADH1CP00326 375 aa9.82□□□□□ -0.84
PPFIA1-212ENST00000528853 SCARF1Q14162 830 aa9.82□□□□□ -0.84
PPFIA1-212ENST00000528853 LIMD1Q9UGP4 676 aa9.82□□□□□ -0.84
PPFIA1-212ENST00000528853 LILRB3O75022 631 aa9.81□□□□□ -0.84
PPFIA1-212ENST00000528853 F12P00748 615 aaPredicted RBP9.81□□□□□ -0.84
PPFIA1-212ENST00000528853 WDR4P57081 412 aaKnown RBP9.81□□□□□ -0.84
PPFIA1-212ENST00000528853 PURBQ96QR8 312 aaKnown RBP9.81□□□□□ -0.84
PPFIA1-212ENST00000528853 MAP10Q9P2G4 905 aa9.81□□□□□ -0.84
PPFIA1-212ENST00000528853 ATP1B4Q9UN42 357 aaPredicted RBP9.81□□□□□ -0.84
PPFIA1-212ENST00000528853 QPCTQ16769 361 aa9.8□□□□□ -0.84
PPFIA1-212ENST00000528853 NBPF14Q5TI25 921 aa9.8□□□□□ -0.84
PPFIA1-212ENST00000528853 BPHLQ86WA6 291 aaPredicted RBP9.8□□□□□ -0.84
PPFIA1-212ENST00000528853 KLF16Q9BXK1 252 aaPredicted RBP9.8□□□□□ -0.84
PPFIA1-212ENST00000528853 DDRGK1Q96HY6 314 aa9.79□□□□□ -0.84
PPFIA1-212ENST00000528853 CDK15Q96Q40 435 aa9.77□□□□□ -0.85
PPFIA1-212ENST00000528853 POLR3EQ9NVU0 708 aa9.77□□□□□ -0.85
PPFIA1-212ENST00000528853 SOBPA7XYQ1 873 aa9.76□□□□□ -0.85
PPFIA1-212ENST00000528853 PER1O15534 1290 aaPredicted RBP9.76□□□□□ -0.85
PPFIA1-212ENST00000528853 VSIG8P0DPA2 414 aa9.76□□□□□ -0.85
PPFIA1-212ENST00000528853 ARID5BQ14865 1188 aa9.76□□□□□ -0.85
PPFIA1-212ENST00000528853 FOXJ1Q92949 421 aa9.75□□□□□ -0.85
PPFIA1-212ENST00000528853 SLC24A1O60721 1099 aa9.74□□□□□ -0.85
PPFIA1-212ENST00000528853 NR5A1Q13285 461 aa9.74□□□□□ -0.85
PPFIA1-212ENST00000528853 GPKOWQ92917 476 aaPredicted RBP eCLIP9.74□□□□□ -0.85
PPFIA1-212ENST00000528853 ZIC2O95409 532 aaPredicted RBP9.73□□□□□ -0.85
PPFIA1-212ENST00000528853 SKIV2LQ15477 1246 aaKnown RBP9.73□□□□□ -0.85
PPFIA1-212ENST00000528853 RTL5Q5HYW3 569 aaPredicted RBP9.73□□□□□ -0.85
PPFIA1-212ENST00000528853 KDM4CQ9H3R0 1056 aa9.73□□□□□ -0.85
PPFIA1-212ENST00000528853 SH3D19Q5HYK7 790 aa9.72□□□□□ -0.85
PPFIA1-212ENST00000528853 ITPKCQ96DU7 683 aa9.72□□□□□ -0.85
PPFIA1-212ENST00000528853 ZFAND3Q9H8U3 227 aa9.72□□□□□ -0.85
PPFIA1-212ENST00000528853 MAN1A2O60476 641 aa9.71□□□□□ -0.86
PPFIA1-212ENST00000528853 NR3C2P08235 984 aa9.71□□□□□ -0.86
PPFIA1-212ENST00000528853 C4orf48Q5BLP8 95 aa9.7□□□□□ -0.86
PPFIA1-212ENST00000528853 C6orf118Q5T5N4 469 aa9.7□□□□□ -0.86
PPFIA1-212ENST00000528853 PNMA1Q8ND90 353 aa9.7□□□□□ -0.86
PPFIA1-212ENST00000528853 MAGEB6P1A0A0J9YX57 407 aa9.69□□□□□ -0.86
PPFIA1-212ENST00000528853 UPP2O95045 317 aa9.69□□□□□ -0.86
PPFIA1-212ENST00000528853 GRM5P41594 1212 aa9.69□□□□□ -0.86
PPFIA1-212ENST00000528853 VASH1Q7L8A9 365 aaPredicted RBP9.67□□□□□ -0.86
PPFIA1-212ENST00000528853 MEIOBQ8N635 442 aa9.67□□□□□ -0.86
PPFIA1-212ENST00000528853 GPBP1L1Q9HC44 474 aaPredicted RBP9.67□□□□□ -0.86
PPFIA1-212ENST00000528853 MAP4K5Q9Y4K4 846 aa9.67□□□□□ -0.86
PPFIA1-212ENST00000528853 ZC3H4Q9UPT8 1303 aaKnown RBP9.66□□□□□ -0.86
PPFIA1-212ENST00000528853 PPFIA3O75145 1194 aa9.66□□□□□ -0.86
PPFIA1-212ENST00000528853 BMP2P12643 396 aa9.66□□□□□ -0.86
PPFIA1-212ENST00000528853 SH3BP5LQ7L8J4 393 aa9.66□□□□□ -0.86
PPFIA1-212ENST00000528853 SH3RF1Q7Z6J0 888 aa9.66□□□□□ -0.86
PPFIA1-212ENST00000528853 TRMT44Q8IYL2 757 aaKnown RBP9.66□□□□□ -0.86
PPFIA1-212ENST00000528853 LINC00528Q8N1L1 170 aa9.66□□□□□ -0.86
PPFIA1-212ENST00000528853 C1QTNF2Q9BXJ5 285 aa9.66□□□□□ -0.86
PPFIA1-212ENST00000528853 CTDSPL2Q05D32 466 aa9.65□□□□□ -0.86
PPFIA1-212ENST00000528853 CARD14Q9BXL6 1004 aa9.65□□□□□ -0.86
PPFIA1-212ENST00000528853 FAM117AQ9C073 453 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms