RNA–Protein interactions for RNA: ENST00000528851.5

MS4A6A-208, Transcript of membrane spanning 4-domains A6A, human

TSL 1 (best) BASIC

Gene MS4A6A, Length 1,806 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MS4A6A-208	ENST00000528851	CHADL	Q6NUI6	762 aa		10.91	□□□□□ -0.66
MS4A6A-208	ENST00000528851	DDX17	Q92841	729 aa	Known RBP	10.91	□□□□□ -0.66
MS4A6A-208	ENST00000528851	ARHGEF28	Q8N1W1	1705 aa	Known RBP	10.91	□□□□□ -0.66
MS4A6A-208	ENST00000528851	PMFBP1	Q8TBY8	1022 aa		10.91	□□□□□ -0.66
MS4A6A-208	ENST00000528851	AHDC1	Q5TGY3	1603 aa	Predicted RBP	10.9	□□□□□ -0.66
MS4A6A-208	ENST00000528851	CABP2	Q9NPB3	220 aa		10.9	□□□□□ -0.66
MS4A6A-208	ENST00000528851	MKRN4P	Q13434	485 aa	Predicted RBP	10.89	□□□□□ -0.67
MS4A6A-208	ENST00000528851	NGDN	Q8NEJ9	315 aa	Known RBP	10.89	□□□□□ -0.67
MS4A6A-208	ENST00000528851	PLSCR2	Q9NRY7	297 aa		10.89	□□□□□ -0.67
MS4A6A-208	ENST00000528851	SPATA31A6	Q5VVP1	1343 aa		10.89	□□□□□ -0.67
MS4A6A-208	ENST00000528851	FMN2	Q9NZ56	1722 aa		10.89	□□□□□ -0.67
MS4A6A-208	ENST00000528851	TULP4	Q9NRJ4	1543 aa		10.89	□□□□□ -0.67
MS4A6A-208	ENST00000528851	TESK2	Q96S53	571 aa		10.88	□□□□□ -0.67
MS4A6A-208	ENST00000528851	POTEI	P0CG38	1075 aa		10.87	□□□□□ -0.67
MS4A6A-208	ENST00000528851	CD44	P16070	742 aa	Known RBP	10.87	□□□□□ -0.67
MS4A6A-208	ENST00000528851	EIF4G2	P78344	907 aa	Known RBP eCLIP	10.87	□□□□□ -0.67
MS4A6A-208	ENST00000528851	CABP1	Q9NZU7	370 aa		10.87	□□□□□ -0.67
MS4A6A-208	ENST00000528851	SPATA31A3	Q5VYP0	1347 aa		10.87	□□□□□ -0.67
MS4A6A-208	ENST00000528851	SBNO1	A3KN83	1393 aa		10.86	□□□□□ -0.67
MS4A6A-208	ENST00000528851	USP47	Q96K76	1375 aa		10.86	□□□□□ -0.67
MS4A6A-208	ENST00000528851	TMF1	P82094	1093 aa		10.86	□□□□□ -0.67
MS4A6A-208	ENST00000528851	CDCA8	Q53HL2	280 aa		10.86	□□□□□ -0.67
MS4A6A-208	ENST00000528851	PHLPP1	O60346	1717 aa		10.86	□□□□□ -0.67
MS4A6A-208	ENST00000528851	ACE	P12821	1306 aa		10.86	□□□□□ -0.67
MS4A6A-208	ENST00000528851	ZBTB22	O15209	634 aa		10.86	□□□□□ -0.67
MS4A6A-208	ENST00000528851	XPC	Q01831	940 aa	Predicted RBP	10.86	□□□□□ -0.67
MS4A6A-208	ENST00000528851	ATP7B	P35670	1465 aa		10.85	□□□□□ -0.67
MS4A6A-208	ENST00000528851	POLR3A	O14802	1390 aa	Predicted RBP	10.85	□□□□□ -0.67
MS4A6A-208	ENST00000528851	BRD4	O60885	1362 aa	Predicted RBP	10.85	□□□□□ -0.67
MS4A6A-208	ENST00000528851	ATAD2	Q6PL18	1390 aa		10.85	□□□□□ -0.67
MS4A6A-208	ENST00000528851	COL16A1	Q07092	1604 aa	Predicted RBP	10.85	□□□□□ -0.67
MS4A6A-208	ENST00000528851	NHSL1	Q5SYE7	1610 aa		10.85	□□□□□ -0.67
MS4A6A-208	ENST00000528851	PNPLA6	Q8IY17	1366 aa		10.84	□□□□□ -0.67
MS4A6A-208	ENST00000528851	KIF1A	Q12756	1690 aa		10.84	□□□□□ -0.67
MS4A6A-208	ENST00000528851	PXDN	Q92626	1479 aa		10.83	□□□□□ -0.68
MS4A6A-208	ENST00000528851	PPIP5K1	Q6PFW1	1433 aa		10.83	□□□□□ -0.68
MS4A6A-208	ENST00000528851	USP32	Q8NFA0	1604 aa		10.83	□□□□□ -0.68
MS4A6A-208	ENST00000528851	QRICH2	Q9H0J4	1663 aa		10.82	□□□□□ -0.68
MS4A6A-208	ENST00000528851	HSPA5	P11021	654 aa	Known RBP	10.82	□□□□□ -0.68
MS4A6A-208	ENST00000528851	ARHGEF10	O15013	1369 aa		10.82	□□□□□ -0.68
MS4A6A-208	ENST00000528851	NUTM2B	A6NNL0	878 aa	Predicted RBP	10.81	□□□□□ -0.68
MS4A6A-208	ENST00000528851	NUTM2E	B1AL46	878 aa	Predicted RBP	10.81	□□□□□ -0.68
MS4A6A-208	ENST00000528851	PAK3	O75914	559 aa	Predicted RBP	10.81	□□□□□ -0.68
MS4A6A-208	ENST00000528851	NUTM2A	Q8IVF1	878 aa	Predicted RBP	10.81	□□□□□ -0.68
MS4A6A-208	ENST00000528851	LMOD2	Q6P5Q4	547 aa		10.81	□□□□□ -0.68
MS4A6A-208	ENST00000528851	TMC1	Q8TDI8	760 aa		10.81	□□□□□ -0.68
MS4A6A-208	ENST00000528851	SLC12A5	Q9H2X9	1139 aa		10.81	□□□□□ -0.68
MS4A6A-208	ENST00000528851	TERF2IP	Q9NYB0	399 aa		10.81	□□□□□ -0.68
MS4A6A-208	ENST00000528851	FARP1	Q9Y4F1	1045 aa	Predicted RBP	10.81	□□□□□ -0.68
MS4A6A-208	ENST00000528851	MEX3C	Q5U5Q3	659 aa	Known RBP	10.8	□□□□□ -0.68
MS4A6A-208	ENST00000528851	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	10.8	□□□□□ -0.68
MS4A6A-208	ENST00000528851	DCBLD2	Q96PD2	775 aa		10.8	□□□□□ -0.68
MS4A6A-208	ENST00000528851	NINL	Q9Y2I6	1382 aa		10.8	□□□□□ -0.68
MS4A6A-208	ENST00000528851	TNS3	Q68CZ2	1445 aa		10.8	□□□□□ -0.68
MS4A6A-208	ENST00000528851	RGPD8	O14715	1765 aa	Predicted RBP	10.79	□□□□□ -0.68
MS4A6A-208	ENST00000528851	NLRP13	Q86W25	1043 aa		10.79	□□□□□ -0.68
MS4A6A-208	ENST00000528851	ABTB2	Q8N961	1025 aa		10.79	□□□□□ -0.68
MS4A6A-208	ENST00000528851	DISP3	Q9P2K9	1392 aa		10.79	□□□□□ -0.68
MS4A6A-208	ENST00000528851	SHPRH	Q149N8	1683 aa		10.78	□□□□□ -0.68
MS4A6A-208	ENST00000528851	CPSF1	Q10570	1443 aa	Known RBP	10.78	□□□□□ -0.68
MS4A6A-208	ENST00000528851	ZNF772	Q68DY9	489 aa	Predicted RBP	10.78	□□□□□ -0.68
MS4A6A-208	ENST00000528851	TTC21A	Q8NDW8	1320 aa		10.78	□□□□□ -0.68
MS4A6A-208	ENST00000528851	ZEB1	P37275	1124 aa	Predicted RBP	10.77	□□□□□ -0.68
MS4A6A-208	ENST00000528851	HAP1	P54257	671 aa	Predicted RBP	10.77	□□□□□ -0.68
MS4A6A-208	ENST00000528851	NGLY1	Q96IV0	654 aa		10.77	□□□□□ -0.68
MS4A6A-208	ENST00000528851	ITSN1	Q15811	1721 aa		10.77	□□□□□ -0.69
MS4A6A-208	ENST00000528851	USP6	P35125	1406 aa		10.77	□□□□□ -0.69
MS4A6A-208	ENST00000528851	TTC21B	Q7Z4L5	1316 aa		10.77	□□□□□ -0.69
MS4A6A-208	ENST00000528851	KTN1	Q86UP2	1357 aa	Known RBP	10.77	□□□□□ -0.69
MS4A6A-208	ENST00000528851	ADAMTS2	O95450	1211 aa		10.77	□□□□□ -0.69
MS4A6A-208	ENST00000528851	SSH2	Q76I76	1423 aa		10.76	□□□□□ -0.69
MS4A6A-208	ENST00000528851	NLRP6	P59044	892 aa		10.76	□□□□□ -0.69
MS4A6A-208	ENST00000528851	FNBP4	Q8N3X1	1017 aa	Predicted RBP	10.76	□□□□□ -0.69
MS4A6A-208	ENST00000528851	CABLES1	Q8TDN4	633 aa		10.76	□□□□□ -0.69
MS4A6A-208	ENST00000528851	RGS17	Q9UGC6	210 aa	Predicted RBP	10.76	□□□□□ -0.69
MS4A6A-208	ENST00000528851	MED1	Q15648	1581 aa	Predicted RBP	10.76	□□□□□ -0.69
MS4A6A-208	ENST00000528851	TOPAZ1	Q8N9V7	1692 aa		10.75	□□□□□ -0.69
MS4A6A-208	ENST00000528851	LRP6	O75581	1613 aa		10.75	□□□□□ -0.69
MS4A6A-208	ENST00000528851	C8orf37	Q96NL8	207 aa		10.74	□□□□□ -0.69
MS4A6A-208	ENST00000528851	COL22A1	Q8NFW1	1626 aa	Predicted RBP	10.74	□□□□□ -0.69
MS4A6A-208	ENST00000528851	GC	P02774	474 aa		10.73	□□□□□ -0.69
MS4A6A-208	ENST00000528851	NUTM2G	Q5VZR2	741 aa		10.73	□□□□□ -0.69
MS4A6A-208	ENST00000528851	ZNF579	Q8NAF0	562 aa	Known RBP	10.73	□□□□□ -0.69
MS4A6A-208	ENST00000528851	KCNH5	Q8NCM2	988 aa		10.73	□□□□□ -0.69
MS4A6A-208	ENST00000528851	AFF2	P51816	1311 aa		10.73	□□□□□ -0.69
MS4A6A-208	ENST00000528851	ANKRD36B	Q8N2N9	1353 aa		10.73	□□□□□ -0.69
MS4A6A-208	ENST00000528851	CD163L1	Q9NR16	1453 aa		10.73	□□□□□ -0.69
MS4A6A-208	ENST00000528851	FAM83G	A6ND36	823 aa		10.72	□□□□□ -0.69
MS4A6A-208	ENST00000528851	C11orf95	C9JLR9	678 aa	Predicted RBP	10.72	□□□□□ -0.69
MS4A6A-208	ENST00000528851	USP21	Q9UK80	565 aa		10.72	□□□□□ -0.69
MS4A6A-208	ENST00000528851	USP19	O94966	1318 aa		10.72	□□□□□ -0.69
MS4A6A-208	ENST00000528851	TRPM3	Q9HCF6	1732 aa	Predicted RBP	10.72	□□□□□ -0.69
MS4A6A-208	ENST00000528851	PLEKHG5	O94827	1062 aa		10.72	□□□□□ -0.69
MS4A6A-208	ENST00000528851	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	10.72	□□□□□ -0.69
MS4A6A-208	ENST00000528851	QTRT2	Q9H974	415 aa	Known RBP	10.72	□□□□□ -0.69
MS4A6A-208	ENST00000528851		A0A1W2PP64	1363 aa		10.72	□□□□□ -0.69
MS4A6A-208	ENST00000528851	USP31	Q70CQ4	1352 aa		10.72	□□□□□ -0.69
MS4A6A-208	ENST00000528851	EDC4	Q6P2E9	1401 aa	Known RBP	10.71	□□□□□ -0.69
MS4A6A-208	ENST00000528851	POTEA	Q6S8J7	498 aa		10.71	□□□□□ -0.69
MS4A6A-208	ENST00000528851	TRPC5	Q9UL62	973 aa	Predicted RBP	10.71	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms