RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 NSD3Q9BZ95 1437 aa16.71■□□□□ 0.27
TRAF3IP2-211ENST00000528599 PSME1Q06323 249 aa16.7■□□□□ 0.26
TRAF3IP2-211ENST00000528599 SSH2Q76I76 1423 aa16.7■□□□□ 0.26
TRAF3IP2-211ENST00000528599 MED1Q15648 1581 aaPredicted RBP16.69■□□□□ 0.26
TRAF3IP2-211ENST00000528599 ILDR2Q71H61 639 aa16.69■□□□□ 0.26
TRAF3IP2-211ENST00000528599 NPHP3Q7Z494 1330 aa16.69■□□□□ 0.26
TRAF3IP2-211ENST00000528599 EDC4Q6P2E9 1401 aaKnown RBP16.69■□□□□ 0.26
TRAF3IP2-211ENST00000528599 JCADQ9P266 1359 aa16.69■□□□□ 0.26
TRAF3IP2-211ENST00000528599 KRT28Q7Z3Y7 464 aa16.69■□□□□ 0.26
TRAF3IP2-211ENST00000528599 NRKQ7Z2Y5 1582 aa16.68■□□□□ 0.26
TRAF3IP2-211ENST00000528599 KNSTRNQ9Y448 316 aa16.68■□□□□ 0.26
TRAF3IP2-211ENST00000528599 TTC21BQ7Z4L5 1316 aa16.67■□□□□ 0.26
TRAF3IP2-211ENST00000528599 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.67■□□□□ 0.26
TRAF3IP2-211ENST00000528599 LRP6O75581 1613 aa16.67■□□□□ 0.26
TRAF3IP2-211ENST00000528599 TRPM3Q9HCF6 1732 aaPredicted RBP16.66■□□□□ 0.26
TRAF3IP2-211ENST00000528599 PNPLA6Q8IY17 1366 aa16.66■□□□□ 0.26
TRAF3IP2-211ENST00000528599 AMER1Q5JTC6 1135 aaPredicted RBP16.65■□□□□ 0.26
TRAF3IP2-211ENST00000528599 LRRC59Q96AG4 307 aaKnown RBP16.65■□□□□ 0.26
TRAF3IP2-211ENST00000528599 BRD4O60885 1362 aaPredicted RBP16.64■□□□□ 0.25
TRAF3IP2-211ENST00000528599 FYB1O15117 783 aa16.64■□□□□ 0.25
TRAF3IP2-211ENST00000528599 PAK3O75914 559 aaPredicted RBP16.64■□□□□ 0.25
TRAF3IP2-211ENST00000528599 NME9Q86XW9 330 aa16.64■□□□□ 0.25
TRAF3IP2-211ENST00000528599 CGNL1Q0VF96 1302 aa16.63■□□□□ 0.25
TRAF3IP2-211ENST00000528599 COL22A1Q8NFW1 1626 aaPredicted RBP16.63■□□□□ 0.25
TRAF3IP2-211ENST00000528599 DIEXFQ68CQ4 756 aaKnown RBP16.63■□□□□ 0.25
TRAF3IP2-211ENST00000528599 TTC21AQ8NDW8 1320 aa16.63■□□□□ 0.25
TRAF3IP2-211ENST00000528599 CNGB1Q14028 1251 aaPredicted RBP16.62■□□□□ 0.25
TRAF3IP2-211ENST00000528599 ZRANB1Q9UGI0 708 aa16.62■□□□□ 0.25
TRAF3IP2-211ENST00000528599 SBNO1A3KN83 1393 aa16.62■□□□□ 0.25
TRAF3IP2-211ENST00000528599 SPATA31A3Q5VYP0 1347 aa16.62■□□□□ 0.25
TRAF3IP2-211ENST00000528599 ALS2Q96Q42 1657 aa16.62■□□□□ 0.25
TRAF3IP2-211ENST00000528599 CC2D1BQ5T0F9 858 aaKnown RBP16.62■□□□□ 0.25
TRAF3IP2-211ENST00000528599 GGNBP2Q9H3C7 697 aa16.61■□□□□ 0.25
TRAF3IP2-211ENST00000528599 NPC1L1Q9UHC9 1359 aa16.61■□□□□ 0.25
TRAF3IP2-211ENST00000528599 PIK3C2AO00443 1686 aa16.61■□□□□ 0.25
TRAF3IP2-211ENST00000528599 SPATA31A6Q5VVP1 1343 aa16.61■□□□□ 0.25
TRAF3IP2-211ENST00000528599 TNS3Q68CZ2 1445 aa16.6■□□□□ 0.25
TRAF3IP2-211ENST00000528599 KIF20BQ96Q89 1820 aa16.6■□□□□ 0.25
TRAF3IP2-211ENST00000528599 NUTM2GQ5VZR2 741 aa16.59■□□□□ 0.25
TRAF3IP2-211ENST00000528599 ABTB2Q8N961 1025 aa16.59■□□□□ 0.25
TRAF3IP2-211ENST00000528599 NSD2O96028 1365 aa16.58■□□□□ 0.24
TRAF3IP2-211ENST00000528599 LMOD2Q6P5Q4 547 aa16.58■□□□□ 0.24
TRAF3IP2-211ENST00000528599 USP31Q70CQ4 1352 aa16.57■□□□□ 0.24
TRAF3IP2-211ENST00000528599 NUTM2BA6NNL0 878 aaPredicted RBP16.57■□□□□ 0.24
TRAF3IP2-211ENST00000528599 NUTM2EB1AL46 878 aaPredicted RBP16.57■□□□□ 0.24
TRAF3IP2-211ENST00000528599 NLRP6P59044 892 aa16.57■□□□□ 0.24
TRAF3IP2-211ENST00000528599 NUTM2AQ8IVF1 878 aaPredicted RBP16.57■□□□□ 0.24
TRAF3IP2-211ENST00000528599 ABCA3Q99758 1704 aa16.57■□□□□ 0.24
TRAF3IP2-211ENST00000528599 OVOS2A0A0J9YW53 1432 aa16.56■□□□□ 0.24
TRAF3IP2-211ENST00000528599 OVOS2Q6IE36 1432 aa16.56■□□□□ 0.24
TRAF3IP2-211ENST00000528599 MARF1Q9Y4F3 1742 aaKnown RBP16.56■□□□□ 0.24
TRAF3IP2-211ENST00000528599 CRYBG1Q9Y4K1 1723 aa16.56■□□□□ 0.24
TRAF3IP2-211ENST00000528599 COG3Q96JB2 828 aa16.56■□□□□ 0.24
TRAF3IP2-211ENST00000528599 RGS17Q9UGC6 210 aaPredicted RBP16.56■□□□□ 0.24
TRAF3IP2-211ENST00000528599 ANKRD26Q9UPS8 1709 aa16.55■□□□□ 0.24
TRAF3IP2-211ENST00000528599 MORC1Q86VD1 984 aa16.55■□□□□ 0.24
TRAF3IP2-211ENST00000528599 PRKRIP1Q9H875 184 aaPredicted RBP16.55■□□□□ 0.24
TRAF3IP2-211ENST00000528599 ARHGEF10O15013 1369 aa16.54■□□□□ 0.24
TRAF3IP2-211ENST00000528599 PARD3Q8TEW0 1356 aa16.54■□□□□ 0.24
TRAF3IP2-211ENST00000528599 USP54Q70EL1 1684 aa16.54■□□□□ 0.24
TRAF3IP2-211ENST00000528599 NLRP13Q86W25 1043 aa16.54■□□□□ 0.24
TRAF3IP2-211ENST00000528599 CABLES1Q8TDN4 633 aa16.54■□□□□ 0.24
TRAF3IP2-211ENST00000528599 ANP32CO43423 234 aa16.53■□□□□ 0.24
TRAF3IP2-211ENST00000528599 PLEKHG5O94827 1062 aa16.53■□□□□ 0.24
TRAF3IP2-211ENST00000528599 TNNT2P45379 298 aaPredicted RBP16.53■□□□□ 0.24
TRAF3IP2-211ENST00000528599 USP19O94966 1318 aa16.52■□□□□ 0.24
TRAF3IP2-211ENST00000528599 ADAMTS2O95450 1211 aa16.52■□□□□ 0.23
TRAF3IP2-211ENST00000528599 FBLN1P23142 703 aa16.52■□□□□ 0.23
TRAF3IP2-211ENST00000528599 RALBP1Q15311 655 aa16.52■□□□□ 0.23
TRAF3IP2-211ENST00000528599 PHRF1Q9P1Y6 1649 aaKnown RBP16.5■□□□□ 0.23
TRAF3IP2-211ENST00000528599 SLIT3O75094 1523 aa16.5■□□□□ 0.23
TRAF3IP2-211ENST00000528599 SOX12O15370 315 aa16.5■□□□□ 0.23
TRAF3IP2-211ENST00000528599 C8orf37Q96NL8 207 aa16.49■□□□□ 0.23
TRAF3IP2-211ENST00000528599 GCP02774 474 aa16.48■□□□□ 0.23
TRAF3IP2-211ENST00000528599 PPP2R1AP30153 589 aa16.48■□□□□ 0.23
TRAF3IP2-211ENST00000528599 MEX3CQ5U5Q3 659 aaKnown RBP16.48■□□□□ 0.23
TRAF3IP2-211ENST00000528599 MIER1Q8N108 512 aa16.48■□□□□ 0.23
TRAF3IP2-211ENST00000528599 PHF23Q9BUL5 403 aaPredicted RBP16.48■□□□□ 0.23
TRAF3IP2-211ENST00000528599 NFAT5O94916 1531 aa16.47■□□□□ 0.23
TRAF3IP2-211ENST00000528599 AATKQ6ZMQ8 1374 aa16.47■□□□□ 0.23
TRAF3IP2-211ENST00000528599 KCNH5Q8NCM2 988 aa16.46■□□□□ 0.23
TRAF3IP2-211ENST00000528599 MYBBP1AQ9BQG0 1328 aaKnown RBP16.46■□□□□ 0.23
TRAF3IP2-211ENST00000528599 RRS1Q15050 365 aaKnown RBP16.46■□□□□ 0.23
TRAF3IP2-211ENST00000528599 POTEAQ6S8J7 498 aa16.45■□□□□ 0.22
TRAF3IP2-211ENST00000528599 POLKQ9UBT6 870 aa16.45■□□□□ 0.22
TRAF3IP2-211ENST00000528599 AFF2P51816 1311 aa16.44■□□□□ 0.22
TRAF3IP2-211ENST00000528599 EMILIN1Q9Y6C2 1016 aa16.44■□□□□ 0.22
TRAF3IP2-211ENST00000528599 MAP3K19Q56UN5 1328 aa16.44■□□□□ 0.22
TRAF3IP2-211ENST00000528599 MAP2P11137 1827 aaKnown RBP16.43■□□□□ 0.22
TRAF3IP2-211ENST00000528599 MTHFSP49914 203 aa16.43■□□□□ 0.22
TRAF3IP2-211ENST00000528599 ZC3H6P61129 1189 aaKnown RBP16.43■□□□□ 0.22
TRAF3IP2-211ENST00000528599 PLCH1Q4KWH8 1693 aa16.43■□□□□ 0.22
TRAF3IP2-211ENST00000528599 BCL9LQ86UU0 1499 aa16.42■□□□□ 0.22
TRAF3IP2-211ENST00000528599 SLIT2O94813 1529 aa16.42■□□□□ 0.22
TRAF3IP2-211ENST00000528599 HAP1P54257 671 aaPredicted RBP16.42■□□□□ 0.22
TRAF3IP2-211ENST00000528599 ARHGEF25Q86VW2 580 aa16.42■□□□□ 0.22
TRAF3IP2-211ENST00000528599 FNBP4Q8N3X1 1017 aaPredicted RBP16.42■□□□□ 0.22
TRAF3IP2-211ENST00000528599 NGLY1Q96IV0 654 aa16.42■□□□□ 0.22
TRAF3IP2-211ENST00000528599 SMG6Q86US8 1419 aaKnown RBP16.41■□□□□ 0.22
TRAF3IP2-211ENST00000528599 CCDC184Q52MB2 194 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms