RNA–Protein interactions for RNA: ENST00000528498.5

RDX-204, Transcript of radixin, humanhuman

TSL 1 (best) BASIC

Gene RDX, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-204ENST00000528498 U2AF1Q01081 240 aaKnown RBP eCLIP28.73■■■□□ 2.196e-6■■■■□ 22.1
RDX-204ENST00000528498 NEUROD2Q15784 382 aa28.73■■■□□ 2.19
RDX-204ENST00000528498 COL3A1P02461 1466 aaPredicted RBP28.72■■■□□ 2.19
RDX-204ENST00000528498 NKTRP30414 1462 aaKnown RBP28.72■■■□□ 2.19
RDX-204ENST00000528498 AKAP12Q02952 1782 aa28.72■■■□□ 2.19
RDX-204ENST00000528498 GOLGA2Q08379 1002 aa28.72■■■□□ 2.19
RDX-204ENST00000528498 RBM33Q96EV2 1170 aaKnown RBP28.72■■■□□ 2.19
RDX-204ENST00000528498 ITSN1Q15811 1721 aa28.71■■■□□ 2.19
RDX-204ENST00000528498 DUSP27Q5VZP5 1158 aa28.71■■■□□ 2.19
RDX-204ENST00000528498 PPM1GO15355 546 aaPredicted RBP28.71■■■□□ 2.19
RDX-204ENST00000528498 ACEP12821 1306 aa28.7■■■□□ 2.19
RDX-204ENST00000528498 TOPAZ1Q8N9V7 1692 aa28.7■■■□□ 2.18
RDX-204ENST00000528498 U2SURPO15042 1029 aaKnown RBP28.69■■■□□ 2.18
RDX-204ENST00000528498 RUNDC1Q96C34 613 aa28.69■■■□□ 2.18
RDX-204ENST00000528498 POLKQ9UBT6 870 aa28.69■■■□□ 2.18
RDX-204ENST00000528498 RGPD8O14715 1765 aaPredicted RBP28.68■■■□□ 2.18
RDX-204ENST00000528498 TCP11L2Q8N4U5 519 aa28.68■■■□□ 2.18
RDX-204ENST00000528498 PMFBP1Q8TBY8 1022 aa28.68■■■□□ 2.18
RDX-204ENST00000528498 MAP2P11137 1827 aaKnown RBP28.67■■■□□ 2.18
RDX-204ENST00000528498 RRP1P56182 461 aaKnown RBP28.67■■■□□ 2.18
RDX-204ENST00000528498 SLFN5Q08AF3 891 aa28.67■■■□□ 2.18
RDX-204ENST00000528498 B4GALNT3Q6L9W6 998 aa28.67■■■□□ 2.18
RDX-204ENST00000528498 PPP4R2Q9NY27 417 aa28.67■■■□□ 2.18
RDX-204ENST00000528498 ERICH6BQ5W0A0 696 aa28.66■■■□□ 2.18
RDX-204ENST00000528498 EMILIN1Q9Y6C2 1016 aa28.66■■■□□ 2.18
RDX-204ENST00000528498 IQSEC2Q5JU85 1478 aa28.65■■■□□ 2.18
RDX-204ENST00000528498 PLEKHG3A1L390 1219 aa28.64■■■□□ 2.18
RDX-204ENST00000528498 WWC1Q8IX03 1113 aa28.64■■■□□ 2.18
RDX-204ENST00000528498 ZNF692Q9BU19 519 aaPredicted RBP28.64■■■□□ 2.18
RDX-204ENST00000528498 PLIN1O60240 522 aa28.63■■■□□ 2.17
RDX-204ENST00000528498 PNPLA6Q8IY17 1366 aa28.63■■■□□ 2.17
RDX-204ENST00000528498 PIK3R4Q99570 1358 aa28.61■■■□□ 2.17
RDX-204ENST00000528498 RRS1Q15050 365 aaKnown RBP28.61■■■□□ 2.17
RDX-204ENST00000528498 COG3Q96JB2 828 aa28.61■■■□□ 2.17
RDX-204ENST00000528498 CHD2O14647 1828 aaKnown RBP28.61■■■□□ 2.17
RDX-204ENST00000528498 TTC21BQ7Z4L5 1316 aa28.61■■■□□ 2.17
RDX-204ENST00000528498 DIAPH1O60610 1272 aaKnown RBP28.61■■■□□ 2.17
RDX-204ENST00000528498 TRMT2AQ8IZ69 625 aaKnown RBP28.6■■■□□ 2.17
RDX-204ENST00000528498 NRKQ7Z2Y5 1582 aa28.59■■■□□ 2.17
RDX-204ENST00000528498 USP6P35125 1406 aa28.59■■■□□ 2.17
RDX-204ENST00000528498 PLEKHF1Q96S99 279 aa28.57■■■□□ 2.16
RDX-204ENST00000528498 NPHP4O75161 1426 aaPredicted RBP28.55■■■□□ 2.16
RDX-204ENST00000528498 PHF23Q9BUL5 403 aaPredicted RBP28.54■■■□□ 2.16
RDX-204ENST00000528498 NGDNQ8NEJ9 315 aaKnown RBP28.53■■■□□ 2.16
RDX-204ENST00000528498 E9PSI1 815 aa28.53■■■□□ 2.16
RDX-204ENST00000528498 EXOC6Q8TAG9 804 aa28.53■■■□□ 2.16
RDX-204ENST00000528498 NALCNQ8IZF0 1738 aa28.53■■■□□ 2.16
RDX-204ENST00000528498 NGEFQ8N5V2 710 aa28.52■■■□□ 2.16
RDX-204ENST00000528498 SSH2Q76I76 1423 aa28.52■■■□□ 2.16
RDX-204ENST00000528498 SOX12O15370 315 aa28.51■■■□□ 2.16
RDX-204ENST00000528498 AATKQ6ZMQ8 1374 aa28.51■■■□□ 2.15
RDX-204ENST00000528498 FMN2Q9NZ56 1722 aa28.49■■■□□ 2.15
RDX-204ENST00000528498 OVOS2A0A0J9YW53 1432 aa28.49■■■□□ 2.15
RDX-204ENST00000528498 OVOS2Q6IE36 1432 aa28.49■■■□□ 2.15
RDX-204ENST00000528498 HMOX1P09601 288 aa28.49■■■□□ 2.15
RDX-204ENST00000528498 C20orf194Q5TEA3 1177 aa28.48■■■□□ 2.15
RDX-204ENST00000528498 RBM19Q9Y4C8 960 aaKnown RBP28.47■■■□□ 2.15
RDX-204ENST00000528498 IL13P35225 146 aa28.47■■■□□ 2.15
RDX-204ENST00000528498 TMPOP42166 694 aaKnown RBP28.46■■■□□ 2.15
RDX-204ENST00000528498 CDK12Q9NYV4 1490 aaPredicted RBP28.46■■■□□ 2.15
RDX-204ENST00000528498 LRRC7Q96NW7 1537 aa28.46■■■□□ 2.15
RDX-204ENST00000528498 MAPK8IP3Q9UPT6 1336 aa28.45■■■□□ 2.14
RDX-204ENST00000528498 PRKAR2BP31323 418 aa28.44■■■□□ 2.14
RDX-204ENST00000528498 CCDC27Q2M243 656 aa28.44■■■□□ 2.14
RDX-204ENST00000528498 RSPH6AQ9H0K4 717 aa28.44■■■□□ 2.14
RDX-204ENST00000528498 ANKARQ7Z5J8 1434 aa28.44■■■□□ 2.14
RDX-204ENST00000528498 TRIM35Q9UPQ4 493 aa28.43■■■□□ 2.14
RDX-204ENST00000528498 BCAR3O75815 825 aa28.42■■■□□ 2.14
RDX-204ENST00000528498 CCDC136Q96JN2 1154 aa28.42■■■□□ 2.14
RDX-204ENST00000528498 NUTM2GQ5VZR2 741 aa28.42■■■□□ 2.14
RDX-204ENST00000528498 WDR63Q8IWG1 891 aa28.41■■■□□ 2.14
RDX-204ENST00000528498 PHACTR3Q96KR7 559 aa28.41■■■□□ 2.14
RDX-204ENST00000528498 FCHSD2O94868 740 aa28.41■■■□□ 2.14
RDX-204ENST00000528498 CRBNQ96SW2 442 aa28.4■■■□□ 2.14
RDX-204ENST00000528498 RIPK4P57078 832 aa28.39■■■□□ 2.14
RDX-204ENST00000528498 C14orf37Q86TY3 774 aa28.39■■■□□ 2.14
RDX-204ENST00000528498 PIK3C2AO00443 1686 aa28.39■■■□□ 2.13
RDX-204ENST00000528498 PEAK1Q9H792 1746 aa28.38■■■□□ 2.13
RDX-204ENST00000528498 ADGRL3Q9HAR2 1447 aa28.38■■■□□ 2.13
RDX-204ENST00000528498 TTC21AQ8NDW8 1320 aa28.38■■■□□ 2.13
RDX-204ENST00000528498 HSPA2P54652 639 aa28.38■■■□□ 2.13
RDX-204ENST00000528498 HSP90AB2PQ58FF8 381 aa28.37■■■□□ 2.13
RDX-204ENST00000528498 USP31Q70CQ4 1352 aa28.37■■■□□ 2.13
RDX-204ENST00000528498 TSR2Q969E8 191 aaKnown RBP28.36■■■□□ 2.13
RDX-204ENST00000528498 PHF8Q9UPP1 1060 aa28.36■■■□□ 2.13
RDX-204ENST00000528498 EIF4A2Q14240 407 aaKnown RBP28.35■■■□□ 2.13
RDX-204ENST00000528498 PAK3O75914 559 aaPredicted RBP28.34■■■□□ 2.13
RDX-204ENST00000528498 NLRP6P59044 892 aa28.33■■■□□ 2.13
RDX-204ENST00000528498 ESCO1Q5FWF5 840 aa28.33■■■□□ 2.13
RDX-204ENST00000528498 MAP3K19Q56UN5 1328 aa28.33■■■□□ 2.13
RDX-204ENST00000528498 NCBP3Q53F19 620 aaKnown RBP28.33■■■□□ 2.13
RDX-204ENST00000528498 AEBP1Q8IUX7 1158 aa28.33■■■□□ 2.13
RDX-204ENST00000528498 ANP32EQ9BTT0 268 aa28.32■■■□□ 2.12
RDX-204ENST00000528498 PNNQ9H307 717 aaKnown RBP28.31■■■□□ 2.12
RDX-204ENST00000528498 PROSER2Q86WR7 435 aaPredicted RBP28.3■■■□□ 2.12
RDX-204ENST00000528498 ABTB2Q8N961 1025 aa28.3■■■□□ 2.12
RDX-204ENST00000528498 ORAI2Q96SN7 254 aa28.3■■■□□ 2.12
RDX-204ENST00000528498 NWD1Q149M9 1564 aa28.3■■■□□ 2.12
RDX-204ENST00000528498 MARF1Q9Y4F3 1742 aaKnown RBP28.29■■■□□ 2.12
RDX-204ENST00000528498 FANCIQ9NVI1 1328 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms