RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-208ENST00000528475 TMPOP42166 694 aaKnown RBP29.91■■■□□ 2.38
GSDMD-208ENST00000528475 SAFB2Q14151 953 aaKnown RBP eCLIP29.9■■■□□ 2.38
GSDMD-208ENST00000528475 PDZRN3Q9UPQ7 1066 aa29.89■■■□□ 2.38
GSDMD-208ENST00000528475 GSE1Q14687 1217 aa29.89■■■□□ 2.37
GSDMD-208ENST00000528475 STK26Q9P289 416 aa29.89■■■□□ 2.37
GSDMD-208ENST00000528475 FYB1O15117 783 aa29.88■■■□□ 2.37
GSDMD-208ENST00000528475 SEC24BO95487 1268 aa29.88■■■□□ 2.37
GSDMD-208ENST00000528475 DZIP1LQ8IYY4 767 aaKnown RBP29.88■■■□□ 2.37
GSDMD-208ENST00000528475 GGNBP2Q9H3C7 697 aa29.88■■■□□ 2.37
GSDMD-208ENST00000528475 TRIM35Q9UPQ4 493 aa29.87■■■□□ 2.37
GSDMD-208ENST00000528475 PNPLA6Q8IY17 1366 aa29.87■■■□□ 2.37
GSDMD-208ENST00000528475 ALKQ9UM73 1620 aa29.85■■■□□ 2.37
GSDMD-208ENST00000528475 PRAM1Q96QH2 718 aa29.85■■■□□ 2.37
GSDMD-208ENST00000528475 U2SURPO15042 1029 aaKnown RBP29.84■■■□□ 2.37
GSDMD-208ENST00000528475 ARHGEF40Q8TER5 1519 aa29.84■■■□□ 2.37
GSDMD-208ENST00000528475 CDC42BPGQ6DT37 1551 aa29.84■■■□□ 2.37
GSDMD-208ENST00000528475 BECN1Q14457 450 aa29.84■■■□□ 2.37
GSDMD-208ENST00000528475 PNNQ9H307 717 aaKnown RBP29.83■■■□□ 2.37
GSDMD-208ENST00000528475 KIF20BQ96Q89 1820 aa29.83■■■□□ 2.37
GSDMD-208ENST00000528475 EXOSC9Q06265 439 aaKnown RBP29.83■■■□□ 2.37
GSDMD-208ENST00000528475 FTSJ3Q8IY81 847 aaKnown RBP29.83■■■□□ 2.37
GSDMD-208ENST00000528475 POGKQ9P215 609 aa29.83■■■□□ 2.37
GSDMD-208ENST00000528475 MINK1Q8N4C8 1332 aaPredicted RBP29.82■■■□□ 2.36
GSDMD-208ENST00000528475 TSR2Q969E8 191 aaKnown RBP29.82■■■□□ 2.36
GSDMD-208ENST00000528475 HDGFL2Q7Z4V5 671 aaPredicted RBP29.81■■■□□ 2.36
GSDMD-208ENST00000528475 SMC4Q9NTJ3 1288 aa29.8■■■□□ 2.36
GSDMD-208ENST00000528475 UPF2Q9HAU5 1272 aaKnown RBP29.8■■■□□ 2.36
GSDMD-208ENST00000528475 DLC1Q96QB1 1528 aa29.79■■■□□ 2.36
GSDMD-208ENST00000528475 KIF13AQ9H1H9 1805 aa29.79■■■□□ 2.36
GSDMD-208ENST00000528475 DIAPH1O60610 1272 aaKnown RBP29.78■■■□□ 2.36
GSDMD-208ENST00000528475 HDAC1Q13547 482 aaPredicted RBP29.78■■■□□ 2.36
GSDMD-208ENST00000528475 DDX19BQ9UMR2 479 aa29.78■■■□□ 2.36
GSDMD-208ENST00000528475 TBC1D32Q96NH3 1257 aa29.78■■■□□ 2.36
GSDMD-208ENST00000528475 TRIM27P14373 513 aa29.77■■■□□ 2.36
GSDMD-208ENST00000528475 SSH1Q8WYL5 1049 aa29.77■■■□□ 2.36
GSDMD-208ENST00000528475 ATF7IPQ6VMQ6 1270 aa29.76■■■□□ 2.35
GSDMD-208ENST00000528475 CDK19Q9BWU1 502 aa29.76■■■□□ 2.35
GSDMD-208ENST00000528475 FRAT2O75474 233 aaPredicted RBP29.75■■■□□ 2.35
GSDMD-208ENST00000528475 RIPK4P57078 832 aa29.74■■■□□ 2.35
GSDMD-208ENST00000528475 ATP7BP35670 1465 aa29.73■■■□□ 2.35
GSDMD-208ENST00000528475 REREQ9P2R6 1566 aa29.73■■■□□ 2.35
GSDMD-208ENST00000528475 FCHSD2O94868 740 aa29.72■■■□□ 2.35
GSDMD-208ENST00000528475 KIF16BQ96L93 1317 aa29.71■■■□□ 2.35
GSDMD-208ENST00000528475 ALDH1L2Q3SY69 923 aa29.7■■■□□ 2.35
GSDMD-208ENST00000528475 FBXO31Q5XUX0 539 aaPredicted RBP29.7■■■□□ 2.35
GSDMD-208ENST00000528475 LRRC7Q96NW7 1537 aa29.7■■■□□ 2.34
GSDMD-208ENST00000528475 CABP1Q9NZU7 370 aa29.7■■■□□ 2.34
GSDMD-208ENST00000528475 PPP6R1Q9UPN7 881 aa29.7■■■□□ 2.34
GSDMD-208ENST00000528475 FAM135BQ49AJ0 1406 aa29.69■■■□□ 2.34
GSDMD-208ENST00000528475 NOB1Q9ULX3 412 aaKnown RBP29.69■■■□□ 2.34
GSDMD-208ENST00000528475 AGLP35573 1532 aa29.69■■■□□ 2.34
GSDMD-208ENST00000528475 IPO8O15397 1037 aaKnown RBP29.68■■■□□ 2.34
GSDMD-208ENST00000528475 PPIP5K1Q6PFW1 1433 aa29.68■■■□□ 2.34
GSDMD-208ENST00000528475 SMC5Q8IY18 1101 aa29.68■■■□□ 2.34
GSDMD-208ENST00000528475 ZNF428Q96B54 188 aa29.67■■■□□ 2.34
GSDMD-208ENST00000528475 SETD1AO15047 1707 aaKnown RBP29.67■■■□□ 2.34
GSDMD-208ENST00000528475 BRPF1P55201 1214 aaPredicted RBP29.67■■■□□ 2.34
GSDMD-208ENST00000528475 ITPRIPQ8IWB1 547 aa29.67■■■□□ 2.34
GSDMD-208ENST00000528475 IL27Q8NEV9 243 aa29.65■■■□□ 2.34
GSDMD-208ENST00000528475 RSPH6AQ9H0K4 717 aa29.65■■■□□ 2.34
GSDMD-208ENST00000528475 ANTXR1Q9H6X2 564 aa29.65■■■□□ 2.34
GSDMD-208ENST00000528475 ZBTB40Q9NUA8 1239 aa29.65■■■□□ 2.34
GSDMD-208ENST00000528475 A2ML1A8K2U0 1454 aa29.64■■■□□ 2.34
GSDMD-208ENST00000528475 SPATA31D1Q6ZQQ2 1576 aa29.64■■■□□ 2.33
GSDMD-208ENST00000528475 TMEM57Q8N5G2 664 aa29.64■■■□□ 2.33
GSDMD-208ENST00000528475 SENP3Q9H4L4 574 aaPredicted RBP29.64■■■□□ 2.33
GSDMD-208ENST00000528475 POLKQ9UBT6 870 aa29.62■■■□□ 2.33
GSDMD-208ENST00000528475 STAG3Q9UJ98 1225 aa29.62■■■□□ 2.33
GSDMD-208ENST00000528475 TBC1D2Q9BYX2 928 aa29.61■■■□□ 2.33
GSDMD-208ENST00000528475 RIMS2Q9UQ26 1411 aa29.58■■■□□ 2.33
GSDMD-208ENST00000528475 PRKAR2BP31323 418 aa29.58■■■□□ 2.33
GSDMD-208ENST00000528475 CPSF1Q10570 1443 aaKnown RBP29.58■■■□□ 2.33
GSDMD-208ENST00000528475 EDC4Q6P2E9 1401 aaKnown RBP29.57■■■□□ 2.32
GSDMD-208ENST00000528475 CALD1Q05682 793 aaKnown RBP29.56■■■□□ 2.32
GSDMD-208ENST00000528475 NFE2L2Q16236 605 aa29.56■■■□□ 2.32
GSDMD-208ENST00000528475 MAP2P11137 1827 aaKnown RBP29.56■■■□□ 2.32
GSDMD-208ENST00000528475 CDK12Q9NYV4 1490 aaPredicted RBP29.55■■■□□ 2.32
GSDMD-208ENST00000528475 C22orf23Q9BZE7 217 aa29.54■■■□□ 2.32
GSDMD-208ENST00000528475 SLKQ9H2G2 1235 aaPredicted RBP29.54■■■□□ 2.32
GSDMD-208ENST00000528475 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.54■■■□□ 2.32
GSDMD-208ENST00000528475 AATKQ6ZMQ8 1374 aa29.53■■■□□ 2.32
GSDMD-208ENST00000528475 PIK3R4Q99570 1358 aa29.53■■■□□ 2.32
GSDMD-208ENST00000528475 NUCB1Q02818 461 aa29.53■■■□□ 2.32
GSDMD-208ENST00000528475 WAPLQ7Z5K2 1190 aa29.53■■■□□ 2.32
GSDMD-208ENST00000528475 ARHGAP45Q92619 1136 aa29.53■■■□□ 2.32
GSDMD-208ENST00000528475 CHMP4BQ9H444 224 aaKnown RBP29.52■■■□□ 2.32
GSDMD-208ENST00000528475 PTCH1Q13635 1447 aa29.52■■■□□ 2.32
GSDMD-208ENST00000528475 NRXN3Q9Y4C0 1643 aa29.51■■■□□ 2.31
GSDMD-208ENST00000528475 IL13P35225 146 aa29.49■■■□□ 2.31
GSDMD-208ENST00000528475 IFT57Q9NWB7 429 aa29.49■■■□□ 2.31
GSDMD-208ENST00000528475 BRPF3Q9ULD4 1205 aa29.49■■■□□ 2.31
GSDMD-208ENST00000528475 WASLO00401 505 aaPredicted RBP29.48■■■□□ 2.31
GSDMD-208ENST00000528475 VAMP4O75379 141 aa29.48■■■□□ 2.31
GSDMD-208ENST00000528475 PHACTR3Q96KR7 559 aa29.48■■■□□ 2.31
GSDMD-208ENST00000528475 ZNF853P0CG23 659 aa29.48■■■□□ 2.31
GSDMD-208ENST00000528475 GNAI1P63096 354 aa29.48■■■□□ 2.31
GSDMD-208ENST00000528475 MRPL50Q8N5N7 158 aaKnown RBP29.48■■■□□ 2.31
GSDMD-208ENST00000528475 KNDC1Q76NI1 1749 aa29.47■■■□□ 2.31
GSDMD-208ENST00000528475 MFAP1P55081 439 aaKnown RBP29.47■■■□□ 2.31
GSDMD-208ENST00000528475 MLECQ14165 292 aa29.46■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms