RNA–Protein interactions for RNA: ENST00000528253.3

PTP4A2-210, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5

Gene PTP4A2, Length 806 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-210ENST00000528253 PRAG1Q86YV5 1406 aa10.36□□□□□ -0.75
PTP4A2-210ENST00000528253 WAPLQ7Z5K2 1190 aa10.36□□□□□ -0.75
PTP4A2-210ENST00000528253 SIRT1Q96EB6 747 aa10.36□□□□□ -0.75
PTP4A2-210ENST00000528253 TECPR2O15040 1411 aa10.35□□□□□ -0.75
PTP4A2-210ENST00000528253 STK25O00506 426 aa10.35□□□□□ -0.75
PTP4A2-210ENST00000528253 NEUROD1Q13562 356 aa10.35□□□□□ -0.75
PTP4A2-210ENST00000528253 METRNQ9UJH8 293 aa10.35□□□□□ -0.75
PTP4A2-210ENST00000528253 ASXL1Q8IXJ9 1541 aa10.34□□□□□ -0.75
PTP4A2-210ENST00000528253 PYGBP11216 843 aa10.34□□□□□ -0.75
PTP4A2-210ENST00000528253 MAMSTRQ6ZN01 415 aa10.34□□□□□ -0.75
PTP4A2-210ENST00000528253 BRINP3Q76B58 766 aa10.34□□□□□ -0.75
PTP4A2-210ENST00000528253 POGKQ9P215 609 aa10.34□□□□□ -0.75
PTP4A2-210ENST00000528253 MST1RQ04912 1400 aa10.33□□□□□ -0.76
PTP4A2-210ENST00000528253 SIN3AQ96ST3 1273 aa10.33□□□□□ -0.76
PTP4A2-210ENST00000528253 TRAK1Q9UPV9 953 aa10.33□□□□□ -0.76
PTP4A2-210ENST00000528253 KIAA1210Q9ULL0 1709 aa10.33□□□□□ -0.76
PTP4A2-210ENST00000528253 SGIP1Q9BQI5 828 aa10.32□□□□□ -0.76
PTP4A2-210ENST00000528253 AHDC1Q5TGY3 1603 aaPredicted RBP10.32□□□□□ -0.76
PTP4A2-210ENST00000528253 RGPD8O14715 1765 aaPredicted RBP10.31□□□□□ -0.76
PTP4A2-210ENST00000528253 MED1Q15648 1581 aaPredicted RBP10.31□□□□□ -0.76
PTP4A2-210ENST00000528253 C1orf167Q5SNV9 1468 aa10.31□□□□□ -0.76
PTP4A2-210ENST00000528253 JCADQ9P266 1359 aa10.31□□□□□ -0.76
PTP4A2-210ENST00000528253 SAFB2Q14151 953 aaKnown RBP eCLIP10.31□□□□□ -0.76
PTP4A2-210ENST00000528253 L3MBTL2Q969R5 705 aa10.31□□□□□ -0.76
PTP4A2-210ENST00000528253 PRAM1Q96QH2 718 aa10.31□□□□□ -0.76
PTP4A2-210ENST00000528253 NHSL1Q5SYE7 1610 aa10.31□□□□□ -0.76
PTP4A2-210ENST00000528253 DLC1Q96QB1 1528 aa10.31□□□□□ -0.76
PTP4A2-210ENST00000528253 CDC42BPGQ6DT37 1551 aa10.31□□□□□ -0.76
PTP4A2-210ENST00000528253 COL16A1Q07092 1604 aaPredicted RBP10.3□□□□□ -0.76
PTP4A2-210ENST00000528253 PLEKHH1Q9ULM0 1364 aa10.3□□□□□ -0.76
PTP4A2-210ENST00000528253 ESCO1Q5FWF5 840 aa10.3□□□□□ -0.76
PTP4A2-210ENST00000528253 LRRC59Q96AG4 307 aaKnown RBP10.3□□□□□ -0.76
PTP4A2-210ENST00000528253 ORAI2Q96SN7 254 aa10.3□□□□□ -0.76
PTP4A2-210ENST00000528253 TSPYL2Q9H2G4 693 aaPredicted RBP10.3□□□□□ -0.76
PTP4A2-210ENST00000528253 ADGRB1O14514 1584 aa10.3□□□□□ -0.76
PTP4A2-210ENST00000528253 FMN2Q9NZ56 1722 aa10.3□□□□□ -0.76
PTP4A2-210ENST00000528253 NUTM2FA1L443 756 aa10.29□□□□□ -0.76
PTP4A2-210ENST00000528253 ZNF467Q7Z7K2 595 aaPredicted RBP10.29□□□□□ -0.76
PTP4A2-210ENST00000528253 TSHZ2Q9NRE2 1034 aa10.29□□□□□ -0.76
PTP4A2-210ENST00000528253 RYDENQ9NUL5 291 aaKnown RBP10.29□□□□□ -0.76
PTP4A2-210ENST00000528253 PHF12Q96QT6 1004 aa10.28□□□□□ -0.76
PTP4A2-210ENST00000528253 SHPRHQ149N8 1683 aa10.28□□□□□ -0.76
PTP4A2-210ENST00000528253 ARHGEF28Q8N1W1 1705 aaKnown RBP10.27□□□□□ -0.76
PTP4A2-210ENST00000528253 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.27□□□□□ -0.77
PTP4A2-210ENST00000528253 PAK3O75914 559 aaPredicted RBP10.27□□□□□ -0.77
PTP4A2-210ENST00000528253 DDX17Q92841 729 aaKnown RBP10.27□□□□□ -0.77
PTP4A2-210ENST00000528253 ZFP91Q96JP5 570 aaPredicted RBP10.27□□□□□ -0.77
PTP4A2-210ENST00000528253 BCL11BQ9C0K0 894 aaPredicted RBP10.27□□□□□ -0.77
PTP4A2-210ENST00000528253 SCUBE2Q9NQ36 999 aa10.27□□□□□ -0.77
PTP4A2-210ENST00000528253 STK24Q9Y6E0 443 aa10.27□□□□□ -0.77
PTP4A2-210ENST00000528253 SPATA31A6Q5VVP1 1343 aa10.27□□□□□ -0.77
PTP4A2-210ENST00000528253 NBPF1Q3BBV0 1214 aa10.26□□□□□ -0.77
PTP4A2-210ENST00000528253 HIRIP3Q9BW71 556 aaPredicted RBP10.26□□□□□ -0.77
PTP4A2-210ENST00000528253 PCGF6Q9BYE7 350 aa10.26□□□□□ -0.77
PTP4A2-210ENST00000528253 NPHP3Q7Z494 1330 aa10.26□□□□□ -0.77
PTP4A2-210ENST00000528253 MINK1Q8N4C8 1332 aaPredicted RBP10.26□□□□□ -0.77
PTP4A2-210ENST00000528253 FOXO3O43524 673 aa10.25□□□□□ -0.77
PTP4A2-210ENST00000528253 MEX3CQ5U5Q3 659 aaKnown RBP10.25□□□□□ -0.77
PTP4A2-210ENST00000528253 TONSLQ96HA7 1378 aa10.25□□□□□ -0.77
PTP4A2-210ENST00000528253 KIF1AQ12756 1690 aa10.25□□□□□ -0.77
PTP4A2-210ENST00000528253 NUTM2BA6NNL0 878 aaPredicted RBP10.24□□□□□ -0.77
PTP4A2-210ENST00000528253 NUTM2EB1AL46 878 aaPredicted RBP10.24□□□□□ -0.77
PTP4A2-210ENST00000528253 WASLO00401 505 aaPredicted RBP10.24□□□□□ -0.77
PTP4A2-210ENST00000528253 NKX1-1Q15270 411 aaPredicted RBP10.24□□□□□ -0.77
PTP4A2-210ENST00000528253 NUTM2AQ8IVF1 878 aaPredicted RBP10.24□□□□□ -0.77
PTP4A2-210ENST00000528253 SLC39A7Q92504 469 aa10.24□□□□□ -0.77
PTP4A2-210ENST00000528253 PHF8Q9UPP1 1060 aa10.24□□□□□ -0.77
PTP4A2-210ENST00000528253 TRPM1Q7Z4N2 1603 aa10.24□□□□□ -0.77
PTP4A2-210ENST00000528253 SOS2Q07890 1332 aaPredicted RBP10.24□□□□□ -0.77
PTP4A2-210ENST00000528253 EIF3AQ14152 1382 aaKnown RBP10.24□□□□□ -0.77
PTP4A2-210ENST00000528253 ADGRB2O60241 1585 aa10.23□□□□□ -0.77
PTP4A2-210ENST00000528253 C7P10643 843 aa10.23□□□□□ -0.77
PTP4A2-210ENST00000528253 PSME1Q06323 249 aa10.23□□□□□ -0.77
PTP4A2-210ENST00000528253 MMRN1Q13201 1228 aa10.23□□□□□ -0.77
PTP4A2-210ENST00000528253 ILDR2Q71H61 639 aa10.23□□□□□ -0.77
PTP4A2-210ENST00000528253 ITSN1Q15811 1721 aa10.22□□□□□ -0.77
PTP4A2-210ENST00000528253 KRT28Q7Z3Y7 464 aa10.22□□□□□ -0.77
PTP4A2-210ENST00000528253 XPCQ01831 940 aaPredicted RBP10.21□□□□□ -0.77
PTP4A2-210ENST00000528253 PMFBP1Q8TBY8 1022 aa10.21□□□□□ -0.77
PTP4A2-210ENST00000528253 CDK19Q9BWU1 502 aa10.21□□□□□ -0.77
PTP4A2-210ENST00000528253 CENPJQ9HC77 1338 aaPredicted RBP10.21□□□□□ -0.78
PTP4A2-210ENST00000528253 ROCK2O75116 1388 aaKnown RBP10.21□□□□□ -0.78
PTP4A2-210ENST00000528253 PNPLA6Q8IY17 1366 aa10.21□□□□□ -0.78
PTP4A2-210ENST00000528253 ANKARQ7Z5J8 1434 aa10.21□□□□□ -0.78
PTP4A2-210ENST00000528253 GTPBP6O43824 516 aaPredicted RBP10.2□□□□□ -0.78
PTP4A2-210ENST00000528253 PDAP1Q13442 181 aaKnown RBP10.2□□□□□ -0.78
PTP4A2-210ENST00000528253 USP32Q8NFA0 1604 aa10.2□□□□□ -0.78
PTP4A2-210ENST00000528253 QRICH2Q9H0J4 1663 aa10.2□□□□□ -0.78
PTP4A2-210ENST00000528253 RGS17Q9UGC6 210 aaPredicted RBP10.2□□□□□ -0.78
PTP4A2-210ENST00000528253 TULP4Q9NRJ4 1543 aa10.19□□□□□ -0.78
PTP4A2-210ENST00000528253 PXDNQ92626 1479 aa10.19□□□□□ -0.78
PTP4A2-210ENST00000528253 NBPF8Q3BBV2 869 aa10.19□□□□□ -0.78
PTP4A2-210ENST00000528253 ZNF772Q68DY9 489 aaPredicted RBP10.19□□□□□ -0.78
PTP4A2-210ENST00000528253 ASTLQ6HA08 431 aaPredicted RBP10.19□□□□□ -0.78
PTP4A2-210ENST00000528253 NGDNQ8NEJ9 315 aaKnown RBP10.19□□□□□ -0.78
PTP4A2-210ENST00000528253 NUDT16Q96DE0 195 aaKnown RBP10.19□□□□□ -0.78
PTP4A2-210ENST00000528253 CCDC61Q9Y6R9 512 aa10.19□□□□□ -0.78
PTP4A2-210ENST00000528253 LRP6O75581 1613 aa10.18□□□□□ -0.78
PTP4A2-210ENST00000528253 GPRASP1Q5JY77 1395 aa10.18□□□□□ -0.78
PTP4A2-210ENST00000528253 SRPK2P78362 688 aaKnown RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms