RNA–Protein interactions for RNA: ENST00000527955.5

GPA33-202, Transcript of glycoprotein A33, humanhuman

TSL 5

Gene GPA33, Length 2,549 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPA33-202ENST00000527955 PIK3R4Q99570 1358 aa18.45■□□□□ 0.54
GPA33-202ENST00000527955 GOLGA2Q08379 1002 aa18.45■□□□□ 0.54
GPA33-202ENST00000527955 NGEFQ8N5V2 710 aa18.45■□□□□ 0.54
GPA33-202ENST00000527955 PPP4R2Q9NY27 417 aa18.44■□□□□ 0.54
GPA33-202ENST00000527955 IQSEC2Q5JU85 1478 aa18.44■□□□□ 0.54
GPA33-202ENST00000527955 DUSP27Q5VZP5 1158 aa18.43■□□□□ 0.54
GPA33-202ENST00000527955 ANKLE2Q86XL3 938 aa18.43■□□□□ 0.54
GPA33-202ENST00000527955 RUNDC1Q96C34 613 aa18.43■□□□□ 0.54
GPA33-202ENST00000527955 PNPLA6Q8IY17 1366 aa18.43■□□□□ 0.54
GPA33-202ENST00000527955 ZNF692Q9BU19 519 aaPredicted RBP18.42■□□□□ 0.54
GPA33-202ENST00000527955 NKTRP30414 1462 aaKnown RBP18.42■□□□□ 0.54
GPA33-202ENST00000527955 RRP1P56182 461 aaKnown RBP18.42■□□□□ 0.54
GPA33-202ENST00000527955 NME9Q86XW9 330 aa18.42■□□□□ 0.54
GPA33-202ENST00000527955 NRKQ7Z2Y5 1582 aa18.42■□□□□ 0.54
GPA33-202ENST00000527955 MAP2P11137 1827 aaKnown RBP18.41■□□□□ 0.54
GPA33-202ENST00000527955 KCNA6P17658 529 aa18.41■□□□□ 0.54
GPA33-202ENST00000527955 PLEKHG3A1L390 1219 aa18.41■□□□□ 0.54
GPA33-202ENST00000527955 SLFN5Q08AF3 891 aa18.41■□□□□ 0.54
GPA33-202ENST00000527955 CHD2O14647 1828 aaKnown RBP18.4■□□□□ 0.54
GPA33-202ENST00000527955 NUTM2FA1L443 756 aa18.4■□□□□ 0.54
GPA33-202ENST00000527955 U2AF1L5P0DN76 240 aaPredicted RBP18.4■□□□□ 0.54
GPA33-202ENST00000527955 U2AF1Q01081 240 aaKnown RBP eCLIP18.4■□□□□ 0.54
GPA33-202ENST00000527955 TRMT2AQ8IZ69 625 aaKnown RBP18.4■□□□□ 0.54
GPA33-202ENST00000527955 ACEP12821 1306 aa18.39■□□□□ 0.53
GPA33-202ENST00000527955 TCP11L2Q8N4U5 519 aa18.39■□□□□ 0.53
GPA33-202ENST00000527955 SPINK5Q9NQ38 1064 aaPredicted RBP18.39■□□□□ 0.53
GPA33-202ENST00000527955 POLKQ9UBT6 870 aa18.39■□□□□ 0.53
GPA33-202ENST00000527955 ZRANB1Q9UGI0 708 aa18.38■□□□□ 0.53
GPA33-202ENST00000527955 RGPD8O14715 1765 aaPredicted RBP18.38■□□□□ 0.53
GPA33-202ENST00000527955 FBLN1P23142 703 aa18.38■□□□□ 0.53
GPA33-202ENST00000527955 WWC1Q8IX03 1113 aa18.38■□□□□ 0.53
GPA33-202ENST00000527955 DMRT2Q9Y5R5 561 aa18.37■□□□□ 0.53
GPA33-202ENST00000527955 PHF23Q9BUL5 403 aaPredicted RBP18.37■□□□□ 0.53
GPA33-202ENST00000527955 AATKQ6ZMQ8 1374 aa18.36■□□□□ 0.53
GPA33-202ENST00000527955 USP6P35125 1406 aa18.36■□□□□ 0.53
GPA33-202ENST00000527955 E9PSI1 815 aa18.35■□□□□ 0.53
GPA33-202ENST00000527955 U2SURPO15042 1029 aaKnown RBP18.35■□□□□ 0.53
GPA33-202ENST00000527955 DIAPH1O60610 1272 aaKnown RBP18.35■□□□□ 0.53
GPA33-202ENST00000527955 COG3Q96JB2 828 aa18.35■□□□□ 0.53
GPA33-202ENST00000527955 RRP7AQ9Y3A4 280 aaKnown RBP18.35■□□□□ 0.53
GPA33-202ENST00000527955 TTC21BQ7Z4L5 1316 aa18.34■□□□□ 0.53
GPA33-202ENST00000527955 MSH5O43196 834 aa18.34■□□□□ 0.53
GPA33-202ENST00000527955 PLEKHF1Q96S99 279 aa18.34■□□□□ 0.53
GPA33-202ENST00000527955 FMN2Q9NZ56 1722 aa18.34■□□□□ 0.53
GPA33-202ENST00000527955 NEUROD2Q15784 382 aa18.33■□□□□ 0.53
GPA33-202ENST00000527955 NCBP3Q53F19 620 aaKnown RBP18.33■□□□□ 0.53
GPA33-202ENST00000527955 SSH2Q76I76 1423 aa18.33■□□□□ 0.53
GPA33-202ENST00000527955 CCDC27Q2M243 656 aa18.33■□□□□ 0.52
GPA33-202ENST00000527955 B4GALNT3Q6L9W6 998 aa18.33■□□□□ 0.52
GPA33-202ENST00000527955 CDK12Q9NYV4 1490 aaPredicted RBP18.33■□□□□ 0.52
GPA33-202ENST00000527955 ANKARQ7Z5J8 1434 aa18.32■□□□□ 0.52
GPA33-202ENST00000527955 EMILIN1Q9Y6C2 1016 aa18.32■□□□□ 0.52
GPA33-202ENST00000527955 NALCNQ8IZF0 1738 aa18.32■□□□□ 0.52
GPA33-202ENST00000527955 NPHP4O75161 1426 aaPredicted RBP18.32■□□□□ 0.52
GPA33-202ENST00000527955 PPM1GO15355 546 aaPredicted RBP18.32■□□□□ 0.52
GPA33-202ENST00000527955 OVOS2A0A0J9YW53 1432 aa18.31■□□□□ 0.52
GPA33-202ENST00000527955 OVOS2Q6IE36 1432 aa18.31■□□□□ 0.52
GPA33-202ENST00000527955 PMFBP1Q8TBY8 1022 aa18.3■□□□□ 0.52
GPA33-202ENST00000527955 WDR63Q8IWG1 891 aa18.29■□□□□ 0.52
GPA33-202ENST00000527955 PLIN1O60240 522 aa18.28■□□□□ 0.52
GPA33-202ENST00000527955 LRRC7Q96NW7 1537 aa18.28■□□□□ 0.52
GPA33-202ENST00000527955 FANCIQ9NVI1 1328 aa18.27■□□□□ 0.52
GPA33-202ENST00000527955 RRS1Q15050 365 aaKnown RBP18.27■□□□□ 0.52
GPA33-202ENST00000527955 TTC21AQ8NDW8 1320 aa18.26■□□□□ 0.51
GPA33-202ENST00000527955 FCHSD2O94868 740 aa18.26■□□□□ 0.51
GPA33-202ENST00000527955 EXOC6Q8TAG9 804 aa18.26■□□□□ 0.51
GPA33-202ENST00000527955 MAPK8IP3Q9UPT6 1336 aa18.26■□□□□ 0.51
GPA33-202ENST00000527955 IL13P35225 146 aa18.26■□□□□ 0.51
GPA33-202ENST00000527955 TMPOP42166 694 aaKnown RBP18.26■□□□□ 0.51
GPA33-202ENST00000527955 NGDNQ8NEJ9 315 aaKnown RBP18.26■□□□□ 0.51
GPA33-202ENST00000527955 PNNQ9H307 717 aaKnown RBP18.25■□□□□ 0.51
GPA33-202ENST00000527955 USP31Q70CQ4 1352 aa18.25■□□□□ 0.51
GPA33-202ENST00000527955 RSPH6AQ9H0K4 717 aa18.25■□□□□ 0.51
GPA33-202ENST00000527955 ADGRL3Q9HAR2 1447 aa18.24■□□□□ 0.51
GPA33-202ENST00000527955 PIK3C2AO00443 1686 aa18.24■□□□□ 0.51
GPA33-202ENST00000527955 NWD1Q149M9 1564 aa18.24■□□□□ 0.51
GPA33-202ENST00000527955 RBM33Q96EV2 1170 aaKnown RBP18.23■□□□□ 0.51
GPA33-202ENST00000527955 CCDC136Q96JN2 1154 aa18.23■□□□□ 0.51
GPA33-202ENST00000527955 TRIM35Q9UPQ4 493 aa18.23■□□□□ 0.51
GPA33-202ENST00000527955 PEAK1Q9H792 1746 aa18.22■□□□□ 0.51
GPA33-202ENST00000527955 PRKAR2BP31323 418 aa18.21■□□□□ 0.51
GPA33-202ENST00000527955 C20orf194Q5TEA3 1177 aa18.21■□□□□ 0.51
GPA33-202ENST00000527955 HMOX1P09601 288 aa18.2■□□□□ 0.5
GPA33-202ENST00000527955 CRBNQ96SW2 442 aa18.19■□□□□ 0.5
GPA33-202ENST00000527955 BCAR3O75815 825 aa18.19■□□□□ 0.5
GPA33-202ENST00000527955 RIPK4P57078 832 aa18.19■□□□□ 0.5
GPA33-202ENST00000527955 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.19■□□□□ 0.5
GPA33-202ENST00000527955 MYH16Q9H6N6 1097 aa18.19■□□□□ 0.5
GPA33-202ENST00000527955 MARF1Q9Y4F3 1742 aaKnown RBP18.19■□□□□ 0.5
GPA33-202ENST00000527955 USP54Q70EL1 1684 aa18.18■□□□□ 0.5
GPA33-202ENST00000527955 ANO8Q9HCE9 1232 aaPredicted RBP18.18■□□□□ 0.5
GPA33-202ENST00000527955 PHACTR3Q96KR7 559 aa18.17■□□□□ 0.5
GPA33-202ENST00000527955 PHF8Q9UPP1 1060 aa18.17■□□□□ 0.5
GPA33-202ENST00000527955 EIF4A2Q14240 407 aaKnown RBP18.16■□□□□ 0.5
GPA33-202ENST00000527955 DEKP35659 375 aaKnown RBP18.16■□□□□ 0.5
GPA33-202ENST00000527955 IL16Q14005 1332 aa18.16■□□□□ 0.5
GPA33-202ENST00000527955 SOX12O15370 315 aa18.15■□□□□ 0.5
GPA33-202ENST00000527955 NEFMP07197 916 aa18.15■□□□□ 0.5
GPA33-202ENST00000527955 RGPD1P0DJD0 1748 aa18.15■□□□□ 0.5
GPA33-202ENST00000527955 MAP3K19Q56UN5 1328 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms