RNA–Protein interactions for RNA: ENST00000527451.1

SNX19-206, Transcript of sorting nexin 19, humanhuman

TSL 3

Gene SNX19, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX19-206ENST00000527451 CDK19Q9BWU1 502 aa7.58□□□□□ -1.2
SNX19-206ENST00000527451 RIMS2Q9UQ26 1411 aa7.58□□□□□ -1.2
SNX19-206ENST00000527451 ARHGEF40Q8TER5 1519 aa7.57□□□□□ -1.2
SNX19-206ENST00000527451 MINK1Q8N4C8 1332 aaPredicted RBP7.57□□□□□ -1.2
SNX19-206ENST00000527451 CD163L1Q9NR16 1453 aa7.57□□□□□ -1.2
SNX19-206ENST00000527451 FYB1O15117 783 aa7.57□□□□□ -1.2
SNX19-206ENST00000527451 BCAR3O75815 825 aa7.57□□□□□ -1.2
SNX19-206ENST00000527451 U2AF1L5P0DN76 240 aaPredicted RBP7.57□□□□□ -1.2
SNX19-206ENST00000527451 CANXP27824 592 aaKnown RBP7.57□□□□□ -1.2
SNX19-206ENST00000527451 U2AF1Q01081 240 aaKnown RBP eCLIP7.57□□□□□ -1.2
SNX19-206ENST00000527451 SAFB2Q14151 953 aaKnown RBP eCLIP7.57□□□□□ -1.2
SNX19-206ENST00000527451 ADGRB2O60241 1585 aa7.57□□□□□ -1.2
SNX19-206ENST00000527451 ATP7BP35670 1465 aa7.56□□□□□ -1.2
SNX19-206ENST00000527451 NLRP1Q9C000 1473 aa7.56□□□□□ -1.2
SNX19-206ENST00000527451 RARSP54136 660 aaKnown RBP7.56□□□□□ -1.2
SNX19-206ENST00000527451 DDRGK1Q96HY6 314 aa7.56□□□□□ -1.2
SNX19-206ENST00000527451 ZNF692Q9BU19 519 aaPredicted RBP7.56□□□□□ -1.2
SNX19-206ENST00000527451 GGNBP2Q9H3C7 697 aa7.56□□□□□ -1.2
SNX19-206ENST00000527451 ESF1Q9H501 851 aaKnown RBP7.56□□□□□ -1.2
SNX19-206ENST00000527451 RRP7AQ9Y3A4 280 aaKnown RBP7.56□□□□□ -1.2
SNX19-206ENST00000527451 PNPLA6Q8IY17 1366 aa7.56□□□□□ -1.2
SNX19-206ENST00000527451 COL3A1P02461 1466 aaPredicted RBP7.55□□□□□ -1.2
SNX19-206ENST00000527451 IL16Q14005 1332 aa7.55□□□□□ -1.2
SNX19-206ENST00000527451 MAPK8IP3Q9UPT6 1336 aa7.55□□□□□ -1.2
SNX19-206ENST00000527451 MYO5BQ9ULV0 1848 aa7.55□□□□□ -1.2
SNX19-206ENST00000527451 DIAPH1O60610 1272 aaKnown RBP7.55□□□□□ -1.2
SNX19-206ENST00000527451 NEUROD2Q15784 382 aa7.55□□□□□ -1.2
SNX19-206ENST00000527451 FAM161AQ3B820 660 aa7.55□□□□□ -1.2
SNX19-206ENST00000527451 CLUAP1Q96AJ1 413 aa7.55□□□□□ -1.2
SNX19-206ENST00000527451 PLEKHF1Q96S99 279 aa7.55□□□□□ -1.2
SNX19-206ENST00000527451 CABP1Q9NZU7 370 aa7.55□□□□□ -1.2
SNX19-206ENST00000527451 ANKRD26Q9UPS8 1709 aa7.55□□□□□ -1.2
SNX19-206ENST00000527451 FAM135BQ49AJ0 1406 aa7.54□□□□□ -1.2
SNX19-206ENST00000527451 U2SURPO15042 1029 aaKnown RBP7.54□□□□□ -1.2
SNX19-206ENST00000527451 TMPOP42166 694 aaKnown RBP7.54□□□□□ -1.2
SNX19-206ENST00000527451 PMFBP1Q8TBY8 1022 aa7.54□□□□□ -1.2
SNX19-206ENST00000527451 ZMYM3Q14202 1370 aa7.54□□□□□ -1.2
SNX19-206ENST00000527451 TECPR2O15040 1411 aa7.53□□□□□ -1.2
SNX19-206ENST00000527451 SPDYE2BA6NHP3 402 aa7.53□□□□□ -1.2
SNX19-206ENST00000527451 WASLO00401 505 aaPredicted RBP7.53□□□□□ -1.2
SNX19-206ENST00000527451 PAK3O75914 559 aaPredicted RBP7.53□□□□□ -1.2
SNX19-206ENST00000527451 FCHSD2O94868 740 aa7.53□□□□□ -1.2
SNX19-206ENST00000527451 SPDYE6P0CI01 402 aa7.53□□□□□ -1.2
SNX19-206ENST00000527451 SPDYE2Q495Y8 402 aa7.53□□□□□ -1.2
SNX19-206ENST00000527451 ZKSCAN2Q63HK3 967 aa7.53□□□□□ -1.2
SNX19-206ENST00000527451 NPM2Q86SE8 214 aaKnown RBP7.53□□□□□ -1.2
SNX19-206ENST00000527451 CDC42BPGQ6DT37 1551 aa7.53□□□□□ -1.2
SNX19-206ENST00000527451 EDC4Q6P2E9 1401 aaKnown RBP7.52□□□□□ -1.2
SNX19-206ENST00000527451 TNRQ92752 1358 aa7.52□□□□□ -1.21
SNX19-206ENST00000527451 NEFMP07197 916 aa7.52□□□□□ -1.21
SNX19-206ENST00000527451 MLECQ14165 292 aa7.52□□□□□ -1.21
SNX19-206ENST00000527451 PANK1Q8TE04 598 aa7.52□□□□□ -1.21
SNX19-206ENST00000527451 FRAT1Q92837 279 aaPredicted RBP7.52□□□□□ -1.21
SNX19-206ENST00000527451 COG6Q9Y2V7 657 aa7.52□□□□□ -1.21
SNX19-206ENST00000527451 SETD1AO15047 1707 aaKnown RBP7.52□□□□□ -1.21
SNX19-206ENST00000527451 CPSF1Q10570 1443 aaKnown RBP7.52□□□□□ -1.21
SNX19-206ENST00000527451 TSPOAP1O95153 1857 aa7.51□□□□□ -1.21
SNX19-206ENST00000527451 AATKQ6ZMQ8 1374 aa7.51□□□□□ -1.21
SNX19-206ENST00000527451 CALD1Q05682 793 aaKnown RBP7.51□□□□□ -1.21
SNX19-206ENST00000527451 C8orf34Q49A92 452 aa7.51□□□□□ -1.21
SNX19-206ENST00000527451 WAPLQ7Z5K2 1190 aa7.51□□□□□ -1.21
SNX19-206ENST00000527451 ZNF428Q96B54 188 aa7.51□□□□□ -1.21
SNX19-206ENST00000527451 RWDD1Q9H446 243 aaPredicted RBP7.51□□□□□ -1.21
SNX19-206ENST00000527451 TRIM35Q9UPQ4 493 aa7.51□□□□□ -1.21
SNX19-206ENST00000527451 CCDC61Q9Y6R9 512 aa7.51□□□□□ -1.21
SNX19-206ENST00000527451 KIF20BQ96Q89 1820 aa7.5□□□□□ -1.21
SNX19-206ENST00000527451 KNDC1Q76NI1 1749 aa7.5□□□□□ -1.21
SNX19-206ENST00000527451 METP08581 1390 aa7.5□□□□□ -1.21
SNX19-206ENST00000527451 NRXN3Q9Y4C0 1643 aa7.5□□□□□ -1.21
SNX19-206ENST00000527451 PPM1GO15355 546 aaPredicted RBP7.5□□□□□ -1.21
SNX19-206ENST00000527451 IGHDP01880 384 aa7.5□□□□□ -1.21
SNX19-206ENST00000527451 RIPK4P57078 832 aa7.5□□□□□ -1.21
SNX19-206ENST00000527451 MVPQ14764 893 aaKnown RBP7.5□□□□□ -1.21
SNX19-206ENST00000527451 POLKQ9UBT6 870 aa7.5□□□□□ -1.21
SNX19-206ENST00000527451 SSUH2Q9Y2M2 353 aa7.5□□□□□ -1.21
SNX19-206ENST00000527451 PPIP5K1Q6PFW1 1433 aa7.5□□□□□ -1.21
SNX19-206ENST00000527451 TMEM2Q9UHN6 1383 aa7.49□□□□□ -1.21
SNX19-206ENST00000527451 CPS1P31327 1500 aa7.49□□□□□ -1.21
SNX19-206ENST00000527451 IPO8O15397 1037 aaKnown RBP7.49□□□□□ -1.21
SNX19-206ENST00000527451 RGS3P49796 1198 aa7.49□□□□□ -1.21
SNX19-206ENST00000527451 EXOSC9Q06265 439 aaKnown RBP7.49□□□□□ -1.21
SNX19-206ENST00000527451 ALDH1L2Q3SY69 923 aa7.49□□□□□ -1.21
SNX19-206ENST00000527451 RTL5Q5HYW3 569 aaPredicted RBP7.49□□□□□ -1.21
SNX19-206ENST00000527451 SKAP1Q86WV1 359 aa7.49□□□□□ -1.21
SNX19-206ENST00000527451 FTSJ3Q8IY81 847 aaKnown RBP7.49□□□□□ -1.21
SNX19-206ENST00000527451 DZIP1LQ8IYY4 767 aaKnown RBP7.49□□□□□ -1.21
SNX19-206ENST00000527451 NUDT16Q96DE0 195 aaKnown RBP7.49□□□□□ -1.21
SNX19-206ENST00000527451 RSPH6AQ9H0K4 717 aa7.49□□□□□ -1.21
SNX19-206ENST00000527451 KIF16BQ96L93 1317 aa7.49□□□□□ -1.21
SNX19-206ENST00000527451 CDK12Q9NYV4 1490 aaPredicted RBP7.49□□□□□ -1.21
SNX19-206ENST00000527451 RLBP1P12271 317 aa7.48□□□□□ -1.21
SNX19-206ENST00000527451 LMOD3Q0VAK6 560 aa7.48□□□□□ -1.21
SNX19-206ENST00000527451 NFE2L2Q16236 605 aa7.48□□□□□ -1.21
SNX19-206ENST00000527451 TXNDC2Q86VQ3 553 aa7.48□□□□□ -1.21
SNX19-206ENST00000527451 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.48□□□□□ -1.21
SNX19-206ENST00000527451 PROM2Q8N271 834 aa7.48□□□□□ -1.21
SNX19-206ENST00000527451 COG3Q96JB2 828 aa7.48□□□□□ -1.21
SNX19-206ENST00000527451 CHMP4BQ9H444 224 aaKnown RBP7.48□□□□□ -1.21
SNX19-206ENST00000527451 SMC4Q9NTJ3 1288 aa7.48□□□□□ -1.21
SNX19-206ENST00000527451 USP35Q9P2H5 1018 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms