RNA–Protein interactions for RNA: ENST00000527004.5

FOXRED1-207, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 5

Gene FOXRED1, Length 1,760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-207ENST00000527004 U2AF1L5P0DN76 240 aaPredicted RBP20.8■□□□□ 0.92
FOXRED1-207ENST00000527004 U2AF1Q01081 240 aaKnown RBP eCLIP20.8■□□□□ 0.92
FOXRED1-207ENST00000527004 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.8■□□□□ 0.92
FOXRED1-207ENST00000527004 TCP11L2Q8N4U5 519 aa20.8■□□□□ 0.92
FOXRED1-207ENST00000527004 PIK3R4Q99570 1358 aa20.79■□□□□ 0.92
FOXRED1-207ENST00000527004 PRR36Q9H6K5 1346 aa20.78■□□□□ 0.92
FOXRED1-207ENST00000527004 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.78■□□□□ 0.92
FOXRED1-207ENST00000527004 NKTRP30414 1462 aaKnown RBP20.78■□□□□ 0.92
FOXRED1-207ENST00000527004 PLEKHG3A1L390 1219 aa20.77■□□□□ 0.92
FOXRED1-207ENST00000527004 WDR63Q8IWG1 891 aa20.77■□□□□ 0.92
FOXRED1-207ENST00000527004 CCDC136Q96JN2 1154 aa20.77■□□□□ 0.91
FOXRED1-207ENST00000527004 PNNQ9H307 717 aaKnown RBP20.77■□□□□ 0.91
FOXRED1-207ENST00000527004 AATKQ6ZMQ8 1374 aa20.76■□□□□ 0.91
FOXRED1-207ENST00000527004 DIAPH1O60610 1272 aaKnown RBP20.76■□□□□ 0.91
FOXRED1-207ENST00000527004 MON2Q7Z3U7 1717 aa20.75■□□□□ 0.91
FOXRED1-207ENST00000527004 SPINK5Q9NQ38 1064 aaPredicted RBP20.75■□□□□ 0.91
FOXRED1-207ENST00000527004 ADAMTSL3P82987 1691 aa20.75■□□□□ 0.91
FOXRED1-207ENST00000527004 RIMS1Q86UR5 1692 aaKnown RBP20.75■□□□□ 0.91
FOXRED1-207ENST00000527004 POLKQ9UBT6 870 aa20.74■□□□□ 0.91
FOXRED1-207ENST00000527004 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.73■□□□□ 0.91
FOXRED1-207ENST00000527004 PLEKHF1Q96S99 279 aa20.73■□□□□ 0.91
FOXRED1-207ENST00000527004 NCKAP5LQ9HCH0 1330 aa20.73■□□□□ 0.91
FOXRED1-207ENST00000527004 AKAP12Q02952 1782 aa20.73■□□□□ 0.91
FOXRED1-207ENST00000527004 COG3Q96JB2 828 aa20.72■□□□□ 0.91
FOXRED1-207ENST00000527004 TOPAZ1Q8N9V7 1692 aa20.72■□□□□ 0.91
FOXRED1-207ENST00000527004 U2SURPO15042 1029 aaKnown RBP20.72■□□□□ 0.91
FOXRED1-207ENST00000527004 ANKLE2Q86XL3 938 aa20.72■□□□□ 0.91
FOXRED1-207ENST00000527004 NME9Q86XW9 330 aa20.72■□□□□ 0.91
FOXRED1-207ENST00000527004 EXOC6Q8TAG9 804 aa20.72■□□□□ 0.91
FOXRED1-207ENST00000527004 XRN1Q8IZH2 1706 aaKnown RBP20.71■□□□□ 0.91
FOXRED1-207ENST00000527004 DMRT2Q9Y5R5 561 aa20.7■□□□□ 0.9
FOXRED1-207ENST00000527004 ZNF142P52746 1687 aaPredicted RBP20.7■□□□□ 0.9
FOXRED1-207ENST00000527004 ITSN1Q15811 1721 aa20.7■□□□□ 0.9
FOXRED1-207ENST00000527004 ACEP12821 1306 aa20.69■□□□□ 0.9
FOXRED1-207ENST00000527004 FCHSD2O94868 740 aa20.69■□□□□ 0.9
FOXRED1-207ENST00000527004 NEUROD2Q15784 382 aa20.69■□□□□ 0.9
FOXRED1-207ENST00000527004 RRP7AQ9Y3A4 280 aaKnown RBP20.69■□□□□ 0.9
FOXRED1-207ENST00000527004 CDK12Q9NYV4 1490 aaPredicted RBP20.68■□□□□ 0.9
FOXRED1-207ENST00000527004 TTC21BQ7Z4L5 1316 aa20.67■□□□□ 0.9
FOXRED1-207ENST00000527004 MAPK8IP3Q9UPT6 1336 aa20.67■□□□□ 0.9
FOXRED1-207ENST00000527004 PLIN1O60240 522 aa20.67■□□□□ 0.9
FOXRED1-207ENST00000527004 USP6P35125 1406 aa20.67■□□□□ 0.9
FOXRED1-207ENST00000527004 TMPOP42166 694 aaKnown RBP20.65■□□□□ 0.9
FOXRED1-207ENST00000527004 MYH16Q9H6N6 1097 aa20.65■□□□□ 0.9
FOXRED1-207ENST00000527004 ANKARQ7Z5J8 1434 aa20.65■□□□□ 0.9
FOXRED1-207ENST00000527004 NRKQ7Z2Y5 1582 aa20.65■□□□□ 0.9
FOXRED1-207ENST00000527004 KCNA6P17658 529 aa20.64■□□□□ 0.9
FOXRED1-207ENST00000527004 SSH2Q76I76 1423 aa20.64■□□□□ 0.9
FOXRED1-207ENST00000527004 TTC21AQ8NDW8 1320 aa20.63■□□□□ 0.89
FOXRED1-207ENST00000527004 PPM1GO15355 546 aaPredicted RBP20.63■□□□□ 0.89
FOXRED1-207ENST00000527004 CRBNQ96SW2 442 aa20.63■□□□□ 0.89
FOXRED1-207ENST00000527004 ZRANB1Q9UGI0 708 aa20.63■□□□□ 0.89
FOXRED1-207ENST00000527004 IL13P35225 146 aa20.62■□□□□ 0.89
FOXRED1-207ENST00000527004 EMILIN1Q9Y6C2 1016 aa20.62■□□□□ 0.89
FOXRED1-207ENST00000527004 IL16Q14005 1332 aa20.62■□□□□ 0.89
FOXRED1-207ENST00000527004 FBLN1P23142 703 aa20.62■□□□□ 0.89
FOXRED1-207ENST00000527004 OVOS2A0A0J9YW53 1432 aa20.61■□□□□ 0.89
FOXRED1-207ENST00000527004 OVOS2Q6IE36 1432 aa20.61■□□□□ 0.89
FOXRED1-207ENST00000527004 NEFMP07197 916 aa20.61■□□□□ 0.89
FOXRED1-207ENST00000527004 RSPH6AQ9H0K4 717 aa20.61■□□□□ 0.89
FOXRED1-207ENST00000527004 SETD1BQ9UPS6 1966 aaKnown RBP20.61■□□□□ 0.89
FOXRED1-207ENST00000527004 NUTM2FA1L443 756 aa20.6■□□□□ 0.89
FOXRED1-207ENST00000527004 CT47B1P0C2W7 299 aaPredicted RBP20.6■□□□□ 0.89
FOXRED1-207ENST00000527004 TRIM35Q9UPQ4 493 aa20.6■□□□□ 0.89
FOXRED1-207ENST00000527004 MAP2P11137 1827 aaKnown RBP20.6■□□□□ 0.89
FOXRED1-207ENST00000527004 USP31Q70CQ4 1352 aa20.59■□□□□ 0.89
FOXRED1-207ENST00000527004 C20orf194Q5TEA3 1177 aa20.59■□□□□ 0.89
FOXRED1-207ENST00000527004 RIPK4P57078 832 aa20.58■□□□□ 0.89
FOXRED1-207ENST00000527004 RBM19Q9Y4C8 960 aaKnown RBP20.58■□□□□ 0.89
FOXRED1-207ENST00000527004 BCAR3O75815 825 aa20.57■□□□□ 0.88
FOXRED1-207ENST00000527004 PDE3AQ14432 1141 aa20.57■□□□□ 0.88
FOXRED1-207ENST00000527004 PRKAR2BP31323 418 aa20.57■□□□□ 0.88
FOXRED1-207ENST00000527004 NGDNQ8NEJ9 315 aaKnown RBP20.57■□□□□ 0.88
FOXRED1-207ENST00000527004 LRRC7Q96NW7 1537 aa20.56■□□□□ 0.88
FOXRED1-207ENST00000527004 RRS1Q15050 365 aaKnown RBP20.56■□□□□ 0.88
FOXRED1-207ENST00000527004 RARSP54136 660 aaKnown RBP20.55■□□□□ 0.88
FOXRED1-207ENST00000527004 PMFBP1Q8TBY8 1022 aa20.55■□□□□ 0.88
FOXRED1-207ENST00000527004 CHD2O14647 1828 aaKnown RBP20.55■□□□□ 0.88
FOXRED1-207ENST00000527004 NPHP4O75161 1426 aaPredicted RBP20.54■□□□□ 0.88
FOXRED1-207ENST00000527004 NALCNQ8IZF0 1738 aa20.53■□□□□ 0.88
FOXRED1-207ENST00000527004 FMN2Q9NZ56 1722 aa20.53■□□□□ 0.88
FOXRED1-207ENST00000527004 NFE2L2Q16236 605 aa20.52■□□□□ 0.88
FOXRED1-207ENST00000527004 FANCIQ9NVI1 1328 aa20.51■□□□□ 0.87
FOXRED1-207ENST00000527004 CALD1Q05682 793 aaKnown RBP20.51■□□□□ 0.87
FOXRED1-207ENST00000527004 HMOX1P09601 288 aa20.5■□□□□ 0.87
FOXRED1-207ENST00000527004 AAMPQ13685 434 aa20.49■□□□□ 0.87
FOXRED1-207ENST00000527004 PHACTR3Q96KR7 559 aa20.49■□□□□ 0.87
FOXRED1-207ENST00000527004 LMOD3Q0VAK6 560 aa20.48■□□□□ 0.87
FOXRED1-207ENST00000527004 ADGRL3Q9HAR2 1447 aa20.48■□□□□ 0.87
FOXRED1-207ENST00000527004 CANXP27824 592 aaKnown RBP20.47■□□□□ 0.87
FOXRED1-207ENST00000527004 EIF4A2Q14240 407 aaKnown RBP20.47■□□□□ 0.87
FOXRED1-207ENST00000527004 KIF24Q5T7B8 1368 aa20.46■□□□□ 0.87
FOXRED1-207ENST00000527004 RGPD8O14715 1765 aaPredicted RBP20.45■□□□□ 0.86
FOXRED1-207ENST00000527004 TCERG1O14776 1098 aaKnown RBP20.45■□□□□ 0.86
FOXRED1-207ENST00000527004 EXOSC9Q06265 439 aaKnown RBP20.45■□□□□ 0.86
FOXRED1-207ENST00000527004 CENPQQ7L2Z9 268 aaPredicted RBP20.45■□□□□ 0.86
FOXRED1-207ENST00000527004 TSR2Q969E8 191 aaKnown RBP20.45■□□□□ 0.86
FOXRED1-207ENST00000527004 PHF8Q9UPP1 1060 aa20.45■□□□□ 0.86
FOXRED1-207ENST00000527004 SBNO1A3KN83 1393 aa20.45■□□□□ 0.86
FOXRED1-207ENST00000527004 KDM2BQ8NHM5 1336 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms