RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 CARD14Q9BXL6 1004 aa22.77■■□□□ 1.24
CAPN1-205ENST00000526954 COL16A1Q07092 1604 aaPredicted RBP22.77■■□□□ 1.24
CAPN1-205ENST00000526954 XPCQ01831 940 aaPredicted RBP22.76■■□□□ 1.23
CAPN1-205ENST00000526954 ALS2Q96Q42 1657 aa22.74■■□□□ 1.23
CAPN1-205ENST00000526954 TTC21BQ7Z4L5 1316 aa22.74■■□□□ 1.23
CAPN1-205ENST00000526954 TTC21AQ8NDW8 1320 aa22.74■■□□□ 1.23
CAPN1-205ENST00000526954 PER1O15534 1290 aaPredicted RBP22.73■■□□□ 1.23
CAPN1-205ENST00000526954 DDX10Q13206 875 aaKnown RBP22.73■■□□□ 1.23
CAPN1-205ENST00000526954 SPATA31A3Q5VYP0 1347 aa22.73■■□□□ 1.23
CAPN1-205ENST00000526954 NSD3Q9BZ95 1437 aa22.73■■□□□ 1.23
CAPN1-205ENST00000526954 LRRC59Q96AG4 307 aaKnown RBP22.72■■□□□ 1.23
CAPN1-205ENST00000526954 TNS3Q68CZ2 1445 aa22.72■■□□□ 1.23
CAPN1-205ENST00000526954 PAK3O75914 559 aaPredicted RBP22.7■■□□□ 1.22
CAPN1-205ENST00000526954 KIF20BQ96Q89 1820 aa22.69■■□□□ 1.22
CAPN1-205ENST00000526954 PIK3C2AO00443 1686 aa22.69■■□□□ 1.22
CAPN1-205ENST00000526954 HSPA1LP34931 641 aa22.69■■□□□ 1.22
CAPN1-205ENST00000526954 ARHGEF10O15013 1369 aa22.68■■□□□ 1.22
CAPN1-205ENST00000526954 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.68■■□□□ 1.22
CAPN1-205ENST00000526954 KNSTRNQ9Y448 316 aa22.68■■□□□ 1.22
CAPN1-205ENST00000526954 USP54Q70EL1 1684 aa22.68■■□□□ 1.22
CAPN1-205ENST00000526954 CGNL1Q0VF96 1302 aa22.67■■□□□ 1.22
CAPN1-205ENST00000526954 USP31Q70CQ4 1352 aa22.66■■□□□ 1.22
CAPN1-205ENST00000526954 FYB1O15117 783 aa22.66■■□□□ 1.22
CAPN1-205ENST00000526954 ABTB2Q8N961 1025 aa22.66■■□□□ 1.22
CAPN1-205ENST00000526954 COL22A1Q8NFW1 1626 aaPredicted RBP22.65■■□□□ 1.22
CAPN1-205ENST00000526954 NME9Q86XW9 330 aa22.65■■□□□ 1.22
CAPN1-205ENST00000526954 MARF1Q9Y4F3 1742 aaKnown RBP22.65■■□□□ 1.22
CAPN1-205ENST00000526954 SHPRHQ149N8 1683 aa22.65■■□□□ 1.22
CAPN1-205ENST00000526954 NPC1L1Q9UHC9 1359 aa22.64■■□□□ 1.22
CAPN1-205ENST00000526954 AMER1Q5JTC6 1135 aaPredicted RBP22.64■■□□□ 1.21
CAPN1-205ENST00000526954 NSD2O96028 1365 aa22.63■■□□□ 1.21
CAPN1-205ENST00000526954 PNPLA6Q8IY17 1366 aa22.63■■□□□ 1.21
CAPN1-205ENST00000526954 MED1Q15648 1581 aaPredicted RBP22.63■■□□□ 1.21
CAPN1-205ENST00000526954 ANKRD26Q9UPS8 1709 aa22.63■■□□□ 1.21
CAPN1-205ENST00000526954 LMOD2Q6P5Q4 547 aa22.63■■□□□ 1.21
CAPN1-205ENST00000526954 JCADQ9P266 1359 aa22.63■■□□□ 1.21
CAPN1-205ENST00000526954 NLRP6P59044 892 aa22.62■■□□□ 1.21
CAPN1-205ENST00000526954 NLRP13Q86W25 1043 aa22.62■■□□□ 1.21
CAPN1-205ENST00000526954 OVOS2A0A0J9YW53 1432 aa22.61■■□□□ 1.21
CAPN1-205ENST00000526954 OVOS2Q6IE36 1432 aa22.61■■□□□ 1.21
CAPN1-205ENST00000526954 CRYBG1Q9Y4K1 1723 aa22.61■■□□□ 1.21
CAPN1-205ENST00000526954 USP19O94966 1318 aa22.6■■□□□ 1.21
CAPN1-205ENST00000526954 ZRANB1Q9UGI0 708 aa22.6■■□□□ 1.21
CAPN1-205ENST00000526954 NUTM2GQ5VZR2 741 aa22.59■■□□□ 1.21
CAPN1-205ENST00000526954 GGNBP2Q9H3C7 697 aa22.59■■□□□ 1.21
CAPN1-205ENST00000526954 SLIT3O75094 1523 aa22.58■■□□□ 1.21
CAPN1-205ENST00000526954 ABCA3Q99758 1704 aa22.58■■□□□ 1.21
CAPN1-205ENST00000526954 COG3Q96JB2 828 aa22.58■■□□□ 1.21
CAPN1-205ENST00000526954 PHRF1Q9P1Y6 1649 aaKnown RBP22.57■■□□□ 1.2
CAPN1-205ENST00000526954 SPATA31A6Q5VVP1 1343 aa22.54■■□□□ 1.2
CAPN1-205ENST00000526954 CC2D1BQ5T0F9 858 aaKnown RBP22.53■■□□□ 1.2
CAPN1-205ENST00000526954 KCNH5Q8NCM2 988 aa22.53■■□□□ 1.2
CAPN1-205ENST00000526954 GCP02774 474 aa22.52■■□□□ 1.2
CAPN1-205ENST00000526954 CABLES1Q8TDN4 633 aa22.52■■□□□ 1.2
CAPN1-205ENST00000526954 MORC1Q86VD1 984 aa22.51■■□□□ 1.19
CAPN1-205ENST00000526954 NFAT5O94916 1531 aa22.51■■□□□ 1.19
CAPN1-205ENST00000526954 AATKQ6ZMQ8 1374 aa22.49■■□□□ 1.19
CAPN1-205ENST00000526954 ILDR1Q86SU0 546 aaPredicted RBP22.48■■□□□ 1.19
CAPN1-205ENST00000526954 MAP2P11137 1827 aaKnown RBP22.47■■□□□ 1.19
CAPN1-205ENST00000526954 PARD3Q8TEW0 1356 aa22.47■■□□□ 1.19
CAPN1-205ENST00000526954 PLEKHG5O94827 1062 aa22.46■■□□□ 1.19
CAPN1-205ENST00000526954 HAP1P54257 671 aaPredicted RBP22.46■■□□□ 1.19
CAPN1-205ENST00000526954 CPDO75976 1380 aa22.46■■□□□ 1.19
CAPN1-205ENST00000526954 RALBP1Q15311 655 aa22.45■■□□□ 1.18
CAPN1-205ENST00000526954 LTN1O94822 1766 aa22.45■■□□□ 1.18
CAPN1-205ENST00000526954 NUTM2BA6NNL0 878 aaPredicted RBP22.44■■□□□ 1.18
CAPN1-205ENST00000526954 NUTM2EB1AL46 878 aaPredicted RBP22.44■■□□□ 1.18
CAPN1-205ENST00000526954 ARHGEF25Q86VW2 580 aa22.44■■□□□ 1.18
CAPN1-205ENST00000526954 NUTM2AQ8IVF1 878 aaPredicted RBP22.44■■□□□ 1.18
CAPN1-205ENST00000526954 LRP6O75581 1613 aa22.43■■□□□ 1.18
CAPN1-205ENST00000526954 SOX12O15370 315 aa22.43■■□□□ 1.18
CAPN1-205ENST00000526954 CNGB1Q14028 1251 aaPredicted RBP22.43■■□□□ 1.18
CAPN1-205ENST00000526954 PRKRIP1Q9H875 184 aaPredicted RBP22.43■■□□□ 1.18
CAPN1-205ENST00000526954 FBLN1P23142 703 aa22.42■■□□□ 1.18
CAPN1-205ENST00000526954 TNNT2P45379 298 aaPredicted RBP22.42■■□□□ 1.18
CAPN1-205ENST00000526954 ZC3H6P61129 1189 aaKnown RBP22.42■■□□□ 1.18
CAPN1-205ENST00000526954 KIAA0232Q92628 1395 aa22.41■■□□□ 1.18
CAPN1-205ENST00000526954 ABCC6O95255 1503 aa22.41■■□□□ 1.18
CAPN1-205ENST00000526954 COL18A1P39060 1754 aa22.4■■□□□ 1.18
CAPN1-205ENST00000526954 KIF24Q5T7B8 1368 aa22.4■■□□□ 1.18
CAPN1-205ENST00000526954 DIEXFQ68CQ4 756 aaKnown RBP22.4■■□□□ 1.18
CAPN1-205ENST00000526954 POLKQ9UBT6 870 aa22.4■■□□□ 1.18
CAPN1-205ENST00000526954 COL14A1Q05707 1796 aaKnown RBP22.4■■□□□ 1.18
CAPN1-205ENST00000526954 SMG6Q86US8 1419 aaKnown RBP22.4■■□□□ 1.18
CAPN1-205ENST00000526954 MAP3K19Q56UN5 1328 aa22.39■■□□□ 1.18
CAPN1-205ENST00000526954 ANP32CO43423 234 aa22.39■■□□□ 1.17
CAPN1-205ENST00000526954 RRS1Q15050 365 aaKnown RBP22.39■■□□□ 1.17
CAPN1-205ENST00000526954 FAM83GA6ND36 823 aa22.38■■□□□ 1.17
CAPN1-205ENST00000526954 ADAMTS2O95450 1211 aa22.38■■□□□ 1.17
CAPN1-205ENST00000526954 PRDM11Q9NQV5 511 aa22.38■■□□□ 1.17
CAPN1-205ENST00000526954 PEAK1Q9H792 1746 aa22.37■■□□□ 1.17
CAPN1-205ENST00000526954 LMO7Q8WWI1 1683 aa22.37■■□□□ 1.17
CAPN1-205ENST00000526954 PPP2R1AP30153 589 aa22.37■■□□□ 1.17
CAPN1-205ENST00000526954 RTL1A6NKG5 1358 aa22.37■■□□□ 1.17
CAPN1-205ENST00000526954 EMILIN1Q9Y6C2 1016 aa22.36■■□□□ 1.17
CAPN1-205ENST00000526954 MYBBP1AQ9BQG0 1328 aaKnown RBP22.35■■□□□ 1.17
CAPN1-205ENST00000526954 IP6K1Q92551 441 aa22.35■■□□□ 1.17
CAPN1-205ENST00000526954 RGPD5Q99666 1765 aa22.35■■□□□ 1.17
CAPN1-205ENST00000526954 PLCH1Q4KWH8 1693 aa22.34■■□□□ 1.17
CAPN1-205ENST00000526954 AMPHP49418 695 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms