RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 ZNF511Q8NB15 262 aa9.36□□□□□ -0.91
CSDE1-211ENST00000525970 BAP1Q92560 729 aa9.36□□□□□ -0.91
CSDE1-211ENST00000525970 TERTO14746 1132 aaKnown RBP9.35□□□□□ -0.91
CSDE1-211ENST00000525970 CAPN5O15484 640 aaPredicted RBP9.35□□□□□ -0.91
CSDE1-211ENST00000525970 PRPF38BQ5VTL8 546 aaKnown RBP9.35□□□□□ -0.91
CSDE1-211ENST00000525970 LYPD8Q6UX82 237 aa9.35□□□□□ -0.91
CSDE1-211ENST00000525970 ZBTB3Q9H5J0 574 aa9.35□□□□□ -0.91
CSDE1-211ENST00000525970 GTF3C3Q9Y5Q9 886 aa9.35□□□□□ -0.91
CSDE1-211ENST00000525970 LINC01559Q495D7 138 aa9.34□□□□□ -0.91
CSDE1-211ENST00000525970 TMEM132AQ24JP5 1023 aa9.33□□□□□ -0.92
CSDE1-211ENST00000525970 PCDHB15Q9Y5E8 787 aa9.32□□□□□ -0.92
CSDE1-211ENST00000525970 CFAP99D6REC4 459 aa9.31□□□□□ -0.92
CSDE1-211ENST00000525970 HRCP23327 699 aa9.31□□□□□ -0.92
CSDE1-211ENST00000525970 CTHP32929 405 aa9.31□□□□□ -0.92
CSDE1-211ENST00000525970 INSM1Q01101 510 aaPredicted RBP9.31□□□□□ -0.92
CSDE1-211ENST00000525970 TRIM46Q7Z4K8 759 aa9.31□□□□□ -0.92
CSDE1-211ENST00000525970 RIC3Q7Z5B4 369 aa9.31□□□□□ -0.92
CSDE1-211ENST00000525970 TLL2Q9Y6L7 1015 aa9.31□□□□□ -0.92
CSDE1-211ENST00000525970 TUSC1Q2TAM9 212 aa9.3□□□□□ -0.92
CSDE1-211ENST00000525970 FAM174AQ8TBP5 190 aa9.3□□□□□ -0.92
CSDE1-211ENST00000525970 F12P00748 615 aaPredicted RBP9.29□□□□□ -0.92
CSDE1-211ENST00000525970 BMP1P13497 986 aa9.28□□□□□ -0.92
CSDE1-211ENST00000525970 NNTQ13423 1086 aa9.28□□□□□ -0.92
CSDE1-211ENST00000525970 NPAS3Q8IXF0 933 aa9.28□□□□□ -0.92
CSDE1-211ENST00000525970 STK17AQ9UEE5 414 aa9.28□□□□□ -0.92
CSDE1-211ENST00000525970 SLC16A10Q8TF71 515 aa9.27□□□□□ -0.93
CSDE1-211ENST00000525970 NXF1Q9UBU9 619 aaKnown RBP9.27□□□□□ -0.93
CSDE1-211ENST00000525970 PDE4DQ08499 809 aa9.26□□□□□ -0.93
CSDE1-211ENST00000525970 CDK15Q96Q40 435 aa9.26□□□□□ -0.93
CSDE1-211ENST00000525970 ADH1CP00326 375 aa9.25□□□□□ -0.93
CSDE1-211ENST00000525970 LCE2CQ5TA81 110 aa9.25□□□□□ -0.93
CSDE1-211ENST00000525970 MYSM1Q5VVJ2 828 aa9.25□□□□□ -0.93
CSDE1-211ENST00000525970 CABLES1Q8TDN4 633 aa9.25□□□□□ -0.93
CSDE1-211ENST00000525970 MAP10Q9P2G4 905 aa9.25□□□□□ -0.93
CSDE1-211ENST00000525970 ARMC2Q8NEN0 867 aa9.24□□□□□ -0.93
CSDE1-211ENST00000525970 TIMP2P16035 220 aa9.23□□□□□ -0.93
CSDE1-211ENST00000525970 WDR4P57081 412 aaKnown RBP9.23□□□□□ -0.93
CSDE1-211ENST00000525970 SCARF1Q14162 830 aa9.23□□□□□ -0.93
CSDE1-211ENST00000525970 CSPP1Q1MSJ5 1256 aa9.23□□□□□ -0.93
CSDE1-211ENST00000525970 MRPL14Q6P1L8 145 aaKnown RBP9.23□□□□□ -0.93
CSDE1-211ENST00000525970 ERICH6Q7L0X2 663 aa9.23□□□□□ -0.93
CSDE1-211ENST00000525970 BPHLQ86WA6 291 aaPredicted RBP9.23□□□□□ -0.93
CSDE1-211ENST00000525970 FOXJ1Q92949 421 aa9.23□□□□□ -0.93
CSDE1-211ENST00000525970 ZFP42Q96MM3 310 aa9.23□□□□□ -0.93
CSDE1-211ENST00000525970 NUTM2BA6NNL0 878 aaPredicted RBP9.22□□□□□ -0.93
CSDE1-211ENST00000525970 NUTM2EB1AL46 878 aaPredicted RBP9.22□□□□□ -0.93
CSDE1-211ENST00000525970 LILRB3O75022 631 aa9.22□□□□□ -0.93
CSDE1-211ENST00000525970 NR5A1Q13285 461 aa9.22□□□□□ -0.93
CSDE1-211ENST00000525970 NUTM2DQ5VT03 806 aaPredicted RBP9.22□□□□□ -0.93
CSDE1-211ENST00000525970 NUTM2AQ8IVF1 878 aaPredicted RBP9.22□□□□□ -0.93
CSDE1-211ENST00000525970 KLF16Q9BXK1 252 aaPredicted RBP9.22□□□□□ -0.93
CSDE1-211ENST00000525970 LIMD1Q9UGP4 676 aa9.22□□□□□ -0.93
CSDE1-211ENST00000525970 PER1O15534 1290 aaPredicted RBP9.21□□□□□ -0.94
CSDE1-211ENST00000525970 IRF7Q92985 503 aa9.21□□□□□ -0.94
CSDE1-211ENST00000525970 AGERQ15109 404 aa9.2□□□□□ -0.94
CSDE1-211ENST00000525970 QPCTQ16769 361 aa9.2□□□□□ -0.94
CSDE1-211ENST00000525970 HELBQ8NG08 1087 aaPredicted RBP9.2□□□□□ -0.94
CSDE1-211ENST00000525970 RSPH6AQ9H0K4 717 aa9.2□□□□□ -0.94
CSDE1-211ENST00000525970 H3BM21 787 aa9.19□□□□□ -0.94
CSDE1-211ENST00000525970 ARID5BQ14865 1188 aa9.19□□□□□ -0.94
CSDE1-211ENST00000525970 NBPF14Q5TI25 921 aa9.19□□□□□ -0.94
CSDE1-211ENST00000525970 C4orf48Q5BLP8 95 aa9.18□□□□□ -0.94
CSDE1-211ENST00000525970 TSC1Q92574 1164 aa9.18□□□□□ -0.94
CSDE1-211ENST00000525970 C1QTNF2Q9BXJ5 285 aa9.18□□□□□ -0.94
CSDE1-211ENST00000525970 CLK2P49760 499 aaKnown RBP9.17□□□□□ -0.94
CSDE1-211ENST00000525970 BRPF1P55201 1214 aaPredicted RBP9.17□□□□□ -0.94
CSDE1-211ENST00000525970 MAP4K5Q9Y4K4 846 aa9.17□□□□□ -0.94
CSDE1-211ENST00000525970 ZIC2O95409 532 aaPredicted RBP9.16□□□□□ -0.94
CSDE1-211ENST00000525970 GRM5P41594 1212 aa9.16□□□□□ -0.94
CSDE1-211ENST00000525970 NEUROD2Q15784 382 aa9.16□□□□□ -0.94
CSDE1-211ENST00000525970 SH3RF1Q7Z6J0 888 aa9.16□□□□□ -0.94
CSDE1-211ENST00000525970 GPKOWQ92917 476 aaPredicted RBP eCLIP9.16□□□□□ -0.94
CSDE1-211ENST00000525970 PURBQ96QR8 312 aaKnown RBP9.16□□□□□ -0.94
CSDE1-211ENST00000525970 TRMT44Q8IYL2 757 aaKnown RBP9.15□□□□□ -0.94
CSDE1-211ENST00000525970 FAM181BA6NEQ2 426 aa9.14□□□□□ -0.95
CSDE1-211ENST00000525970 NR3C2P08235 984 aa9.14□□□□□ -0.95
CSDE1-211ENST00000525970 GMPRP36959 345 aa9.14□□□□□ -0.95
CSDE1-211ENST00000525970 RTL5Q5HYW3 569 aaPredicted RBP9.14□□□□□ -0.95
CSDE1-211ENST00000525970 SH3BP5LQ7L8J4 393 aa9.14□□□□□ -0.95
CSDE1-211ENST00000525970 ITPKCQ96DU7 683 aa9.14□□□□□ -0.95
CSDE1-211ENST00000525970 ZFAND3Q9H8U3 227 aa9.14□□□□□ -0.95
CSDE1-211ENST00000525970 GPBP1L1Q9HC44 474 aaPredicted RBP9.14□□□□□ -0.95
CSDE1-211ENST00000525970 UPP2O95045 317 aa9.12□□□□□ -0.95
CSDE1-211ENST00000525970 KDM4CQ9H3R0 1056 aa9.12□□□□□ -0.95
CSDE1-211ENST00000525970 VEGFBP49765 207 aa9.11□□□□□ -0.95
CSDE1-211ENST00000525970 MEIOBQ8N635 442 aa9.11□□□□□ -0.95
CSDE1-211ENST00000525970 VSIG8P0DPA2 414 aa9.1□□□□□ -0.95
CSDE1-211ENST00000525970 VASH1Q7L8A9 365 aaPredicted RBP9.1□□□□□ -0.95
CSDE1-211ENST00000525970 ZSCAN1Q8NBB4 408 aa9.1□□□□□ -0.95
CSDE1-211ENST00000525970 POLR3EQ9NVU0 708 aa9.1□□□□□ -0.95
CSDE1-211ENST00000525970 ERBB4Q15303 1308 aa9.09□□□□□ -0.95
CSDE1-211ENST00000525970 MAN1A2O60476 641 aa9.09□□□□□ -0.95
CSDE1-211ENST00000525970 FSHRP23945 695 aa9.09□□□□□ -0.95
CSDE1-211ENST00000525970 LINC00528Q8N1L1 170 aa9.09□□□□□ -0.95
CSDE1-211ENST00000525970 EMILIN1Q9Y6C2 1016 aa9.09□□□□□ -0.95
CSDE1-211ENST00000525970 MAGEB6P1A0A0J9YX57 407 aa9.08□□□□□ -0.96
CSDE1-211ENST00000525970 BMP2P12643 396 aa9.08□□□□□ -0.96
CSDE1-211ENST00000525970 C6orf118Q5T5N4 469 aa9.08□□□□□ -0.96
CSDE1-211ENST00000525970 ARXQ96QS3 562 aa9.08□□□□□ -0.96
CSDE1-211ENST00000525970 SOBPA7XYQ1 873 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms