RNA–Protein interactions for RNA: ENST00000525633.1

ATPAF1-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 4

Gene ATPAF1, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-207ENST00000525633 KIF20BQ96Q89 1820 aa8.74□□□□□ -1.01
ATPAF1-207ENST00000525633 ANKARQ7Z5J8 1434 aa8.73□□□□□ -1.01
ATPAF1-207ENST00000525633 FOXO3O43524 673 aa8.73□□□□□ -1.01
ATPAF1-207ENST00000525633 HDGFL2Q7Z4V5 671 aaPredicted RBP8.73□□□□□ -1.01
ATPAF1-207ENST00000525633 FNBP4Q8N3X1 1017 aaPredicted RBP8.73□□□□□ -1.01
ATPAF1-207ENST00000525633 PMFBP1Q8TBY8 1022 aa8.73□□□□□ -1.01
ATPAF1-207ENST00000525633 TERF2IPQ9NYB0 399 aa8.73□□□□□ -1.01
ATPAF1-207ENST00000525633 NINLQ9Y2I6 1382 aa8.73□□□□□ -1.01
ATPAF1-207ENST00000525633 NGDNQ8NEJ9 315 aaKnown RBP8.72□□□□□ -1.01
ATPAF1-207ENST00000525633 USP21Q9UK80 565 aa8.72□□□□□ -1.01
ATPAF1-207ENST00000525633 PHF8Q9UPP1 1060 aa8.72□□□□□ -1.01
ATPAF1-207ENST00000525633 NPHP3Q7Z494 1330 aa8.72□□□□□ -1.01
ATPAF1-207ENST00000525633 KIF1AQ12756 1690 aa8.72□□□□□ -1.01
ATPAF1-207ENST00000525633 PLEKHG3A1L390 1219 aa8.71□□□□□ -1.02
ATPAF1-207ENST00000525633 XPCQ01831 940 aaPredicted RBP8.71□□□□□ -1.02
ATPAF1-207ENST00000525633 CARD14Q9BXL6 1004 aa8.71□□□□□ -1.02
ATPAF1-207ENST00000525633 KNSTRNQ9Y448 316 aa8.71□□□□□ -1.02
ATPAF1-207ENST00000525633 ACEP12821 1306 aa8.71□□□□□ -1.02
ATPAF1-207ENST00000525633 A0A1W2PP64 1363 aa8.71□□□□□ -1.02
ATPAF1-207ENST00000525633 KTN1Q86UP2 1357 aaKnown RBP8.71□□□□□ -1.02
ATPAF1-207ENST00000525633 ANKRD36BQ8N2N9 1353 aa8.71□□□□□ -1.02
ATPAF1-207ENST00000525633 ANKRD26Q9UPS8 1709 aa8.71□□□□□ -1.02
ATPAF1-207ENST00000525633 CD163L1Q9NR16 1453 aa8.7□□□□□ -1.02
ATPAF1-207ENST00000525633 CDK12Q9NYV4 1490 aaPredicted RBP8.7□□□□□ -1.02
ATPAF1-207ENST00000525633 TRPC5Q9UL62 973 aaPredicted RBP8.7□□□□□ -1.02
ATPAF1-207ENST00000525633 NSD3Q9BZ95 1437 aa8.7□□□□□ -1.02
ATPAF1-207ENST00000525633 MAP2P11137 1827 aaKnown RBP8.69□□□□□ -1.02
ATPAF1-207ENST00000525633 PER1O15534 1290 aaPredicted RBP8.69□□□□□ -1.02
ATPAF1-207ENST00000525633 ANP32CO43423 234 aa8.69□□□□□ -1.02
ATPAF1-207ENST00000525633 CC2D1BQ5T0F9 858 aaKnown RBP8.69□□□□□ -1.02
ATPAF1-207ENST00000525633 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.69□□□□□ -1.02
ATPAF1-207ENST00000525633 ZNF692Q9BU19 519 aaPredicted RBP8.69□□□□□ -1.02
ATPAF1-207ENST00000525633 CPSF1Q10570 1443 aaKnown RBP8.69□□□□□ -1.02
ATPAF1-207ENST00000525633 PSME1Q06323 249 aa8.68□□□□□ -1.02
ATPAF1-207ENST00000525633 KRT28Q7Z3Y7 464 aa8.68□□□□□ -1.02
ATPAF1-207ENST00000525633 MIER1Q8N108 512 aa8.68□□□□□ -1.02
ATPAF1-207ENST00000525633 NRKQ7Z2Y5 1582 aa8.68□□□□□ -1.02
ATPAF1-207ENST00000525633 SHPRHQ149N8 1683 aa8.68□□□□□ -1.02
ATPAF1-207ENST00000525633 POLR3AO14802 1390 aaPredicted RBP8.67□□□□□ -1.02
ATPAF1-207ENST00000525633 PAK3O75914 559 aaPredicted RBP8.67□□□□□ -1.02
ATPAF1-207ENST00000525633 SPATA31A3Q5VYP0 1347 aa8.67□□□□□ -1.02
ATPAF1-207ENST00000525633 TRPM3Q9HCF6 1732 aaPredicted RBP8.67□□□□□ -1.02
ATPAF1-207ENST00000525633 RGS12O14924 1447 aa8.66□□□□□ -1.02
ATPAF1-207ENST00000525633 USP6P35125 1406 aa8.66□□□□□ -1.02
ATPAF1-207ENST00000525633 EDC4Q6P2E9 1401 aaKnown RBP8.66□□□□□ -1.02
ATPAF1-207ENST00000525633 CGNL1Q0VF96 1302 aa8.66□□□□□ -1.02
ATPAF1-207ENST00000525633 TTC21BQ7Z4L5 1316 aa8.66□□□□□ -1.02
ATPAF1-207ENST00000525633 AMER1Q5JTC6 1135 aaPredicted RBP8.66□□□□□ -1.02
ATPAF1-207ENST00000525633 NME9Q86XW9 330 aa8.66□□□□□ -1.02
ATPAF1-207ENST00000525633 GJD4Q96KN9 370 aaPredicted RBP8.66□□□□□ -1.02
ATPAF1-207ENST00000525633 NHSL1Q5SYE7 1610 aa8.65□□□□□ -1.02
ATPAF1-207ENST00000525633 BCL9LQ86UU0 1499 aa8.65□□□□□ -1.02
ATPAF1-207ENST00000525633 PXDNQ92626 1479 aa8.65□□□□□ -1.02
ATPAF1-207ENST00000525633 UNC5CLQ8IV45 518 aa8.65□□□□□ -1.02
ATPAF1-207ENST00000525633 GGNBP2Q9H3C7 697 aa8.65□□□□□ -1.02
ATPAF1-207ENST00000525633 ZRANB1Q9UGI0 708 aa8.65□□□□□ -1.02
ATPAF1-207ENST00000525633 MARF1Q9Y4F3 1742 aaKnown RBP8.65□□□□□ -1.03
ATPAF1-207ENST00000525633 PIK3C2AO00443 1686 aa8.65□□□□□ -1.03
ATPAF1-207ENST00000525633 ATRNO75882 1429 aa8.64□□□□□ -1.03
ATPAF1-207ENST00000525633 FYB1O15117 783 aa8.64□□□□□ -1.03
ATPAF1-207ENST00000525633 PLEKHG5O94827 1062 aa8.64□□□□□ -1.03
ATPAF1-207ENST00000525633 TNNT2P45379 298 aaPredicted RBP8.64□□□□□ -1.03
ATPAF1-207ENST00000525633 RALBP1Q15311 655 aa8.64□□□□□ -1.03
ATPAF1-207ENST00000525633 NUTM2GQ5VZR2 741 aa8.64□□□□□ -1.03
ATPAF1-207ENST00000525633 LMOD2Q6P5Q4 547 aa8.64□□□□□ -1.03
ATPAF1-207ENST00000525633 MORC1Q86VD1 984 aa8.64□□□□□ -1.03
ATPAF1-207ENST00000525633 PRKRIP1Q9H875 184 aaPredicted RBP8.64□□□□□ -1.03
ATPAF1-207ENST00000525633 NPC1L1Q9UHC9 1359 aa8.63□□□□□ -1.03
ATPAF1-207ENST00000525633 ALS2Q96Q42 1657 aa8.63□□□□□ -1.03
ATPAF1-207ENST00000525633 TTC21AQ8NDW8 1320 aa8.63□□□□□ -1.03
ATPAF1-207ENST00000525633 CABLES1Q8TDN4 633 aa8.63□□□□□ -1.03
ATPAF1-207ENST00000525633 SSH2Q76I76 1423 aa8.63□□□□□ -1.03
ATPAF1-207ENST00000525633 NSD2O96028 1365 aa8.62□□□□□ -1.03
ATPAF1-207ENST00000525633 PARD3Q8TEW0 1356 aa8.62□□□□□ -1.03
ATPAF1-207ENST00000525633 CCDC125Q86Z20 511 aa8.62□□□□□ -1.03
ATPAF1-207ENST00000525633 ABTB2Q8N961 1025 aa8.62□□□□□ -1.03
ATPAF1-207ENST00000525633 COG3Q96JB2 828 aa8.62□□□□□ -1.03
ATPAF1-207ENST00000525633 LTN1O94822 1766 aa8.62□□□□□ -1.03
ATPAF1-207ENST00000525633 USP54Q70EL1 1684 aa8.62□□□□□ -1.03
ATPAF1-207ENST00000525633 SBNO1A3KN83 1393 aa8.61□□□□□ -1.03
ATPAF1-207ENST00000525633 BRD4O60885 1362 aaPredicted RBP8.61□□□□□ -1.03
ATPAF1-207ENST00000525633 SRCAPQ6ZRS2 3230 aa8.61□□□□□ -1.03
ATPAF1-207ENST00000525633 HAP1P54257 671 aaPredicted RBP8.61□□□□□ -1.03
ATPAF1-207ENST00000525633 NLRP6P59044 892 aa8.61□□□□□ -1.03
ATPAF1-207ENST00000525633 RGPD5Q99666 1765 aa8.61□□□□□ -1.03
ATPAF1-207ENST00000525633 MYBBP1AQ9BQG0 1328 aaKnown RBP8.6□□□□□ -1.03
ATPAF1-207ENST00000525633 FAM83GA6ND36 823 aa8.6□□□□□ -1.03
ATPAF1-207ENST00000525633 SOX12O15370 315 aa8.6□□□□□ -1.03
ATPAF1-207ENST00000525633 ONECUT3O60422 494 aaPredicted RBP8.6□□□□□ -1.03
ATPAF1-207ENST00000525633 PPP2R1AP30153 589 aa8.6□□□□□ -1.03
ATPAF1-207ENST00000525633 VPS72Q15906 364 aa8.6□□□□□ -1.03
ATPAF1-207ENST00000525633 FBLN1P23142 703 aa8.59□□□□□ -1.03
ATPAF1-207ENST00000525633 NLRP13Q86W25 1043 aa8.59□□□□□ -1.03
ATPAF1-207ENST00000525633 SEPT12Q8IYM1 358 aa8.59□□□□□ -1.03
ATPAF1-207ENST00000525633 TNS3Q68CZ2 1445 aa8.59□□□□□ -1.03
ATPAF1-207ENST00000525633 ARHGEF10O15013 1369 aa8.59□□□□□ -1.03
ATPAF1-207ENST00000525633 USP31Q70CQ4 1352 aa8.59□□□□□ -1.03
ATPAF1-207ENST00000525633 SLIT2O94813 1529 aa8.59□□□□□ -1.03
ATPAF1-207ENST00000525633 PHRF1Q9P1Y6 1649 aaKnown RBP8.58□□□□□ -1.04
ATPAF1-207ENST00000525633 CRYBG1Q9Y4K1 1723 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms