RNA–Protein interactions for RNA: ENST00000525508.1

CHD7-203, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 5 BASIC

Gene CHD7, Length 4,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-203ENST00000525508 SMC3Q9UQE7 1217 aa10.1□□□□□ -0.79
CHD7-203ENST00000525508 IDI1Q13907 227 aa10.1□□□□□ -0.79
CHD7-203ENST00000525508 IFT140Q96RY7 1462 aa10.1□□□□□ -0.79
CHD7-203ENST00000525508 PTCD1O75127 700 aaKnown RBP10.1□□□□□ -0.79
CHD7-203ENST00000525508 CCDC61Q9Y6R9 512 aa10.1□□□□□ -0.79
CHD7-203ENST00000525508 ADGRF5Q8IZF2 1346 aa10.1□□□□□ -0.79
CHD7-203ENST00000525508 RTEL1-TNFRSF6BF6WH68 1400 aa10.09□□□□□ -0.79
CHD7-203ENST00000525508 TPD52L1Q16890 204 aaPredicted RBP10.09□□□□□ -0.79
CHD7-203ENST00000525508 ANKLE2Q86XL3 938 aa10.09□□□□□ -0.79
CHD7-203ENST00000525508 RNF214Q8ND24 703 aa10.09□□□□□ -0.79
CHD7-203ENST00000525508 NOL10Q9BSC4 688 aaKnown RBP10.09□□□□□ -0.79
CHD7-203ENST00000525508 CHMP5Q9NZZ3 219 aa10.09□□□□□ -0.79
CHD7-203ENST00000525508 PPP1R1BQ9UD71 204 aaPredicted RBP10.09□□□□□ -0.79
CHD7-203ENST00000525508 GOLGA6L19H0YKK7 550 aa10.09□□□□□ -0.79
CHD7-203ENST00000525508 NME9Q86XW9 330 aa10.09□□□□□ -0.79
CHD7-203ENST00000525508 ERC2O15083 957 aa10.09□□□□□ -0.79
CHD7-203ENST00000525508 TATP17735 454 aaPredicted RBP10.09□□□□□ -0.79
CHD7-203ENST00000525508 RNF20Q5VTR2 975 aa10.09□□□□□ -0.79
CHD7-203ENST00000525508 ATP6V1DQ9Y5K8 247 aa10.09□□□□□ -0.79
CHD7-203ENST00000525508 GNAI3P08754 354 aa10.09□□□□□ -0.79
CHD7-203ENST00000525508 C20orf194Q5TEA3 1177 aa10.09□□□□□ -0.79
CHD7-203ENST00000525508 CCAR2Q8N163 923 aaKnown RBP10.09□□□□□ -0.79
CHD7-203ENST00000525508 RALYLQ86SE5 291 aaKnown RBP10.08□□□□□ -0.8
CHD7-203ENST00000525508 TRIM29Q14134 588 aa10.08□□□□□ -0.8
CHD7-203ENST00000525508 NFKBIBQ15653 356 aa10.08□□□□□ -0.8
CHD7-203ENST00000525508 LRRFIP1Q32MZ4 808 aaKnown RBP10.08□□□□□ -0.8
CHD7-203ENST00000525508 EPRSP07814 1512 aaKnown RBP10.08□□□□□ -0.8
CHD7-203ENST00000525508 TOP2BQ02880 1626 aa10.08□□□□□ -0.8
CHD7-203ENST00000525508 ROCK1Q13464 1354 aa10.08□□□□□ -0.8
CHD7-203ENST00000525508 HSP90AB4PQ58FF6 505 aa10.08□□□□□ -0.8
CHD7-203ENST00000525508 ATF7IPQ6VMQ6 1270 aa10.08□□□□□ -0.8
CHD7-203ENST00000525508 EMILIN1Q9Y6C2 1016 aa10.08□□□□□ -0.8
CHD7-203ENST00000525508 CABP4P57796 275 aa10.07□□□□□ -0.8
CHD7-203ENST00000525508 CDC45O75419 566 aa10.07□□□□□ -0.8
CHD7-203ENST00000525508 RRP12Q5JTH9 1297 aaKnown RBP10.07□□□□□ -0.8
CHD7-203ENST00000525508 ZNF692Q9BU19 519 aaPredicted RBP10.07□□□□□ -0.8
CHD7-203ENST00000525508 TRIM34Q9BYJ4 488 aa10.07□□□□□ -0.8
CHD7-203ENST00000525508 PHF14O94880 888 aa10.07□□□□□ -0.8
CHD7-203ENST00000525508 NOC3LQ8WTT2 800 aaKnown RBP10.07□□□□□ -0.8
CHD7-203ENST00000525508 ZNF592Q92610 1267 aa10.07□□□□□ -0.8
CHD7-203ENST00000525508 TIAM1Q13009 1591 aa10.06□□□□□ -0.8
CHD7-203ENST00000525508 GNAI2P04899 355 aa10.06□□□□□ -0.8
CHD7-203ENST00000525508 SPINK5Q9NQ38 1064 aaPredicted RBP10.06□□□□□ -0.8
CHD7-203ENST00000525508 EXOC6BQ9Y2D4 811 aa10.06□□□□□ -0.8
CHD7-203ENST00000525508 TMPOP42166 694 aaKnown RBP10.06□□□□□ -0.8
CHD7-203ENST00000525508 CEBPZQ03701 1054 aaKnown RBP10.06□□□□□ -0.8
CHD7-203ENST00000525508 KAT6BQ8WYB5 2073 aa10.06□□□□□ -0.8
CHD7-203ENST00000525508 NSD3Q9BZ95 1437 aa10.06□□□□□ -0.8
CHD7-203ENST00000525508 MPNDQ8N594 471 aa10.06□□□□□ -0.8
CHD7-203ENST00000525508 SRGAP3O43295 1099 aa10.05□□□□□ -0.8
CHD7-203ENST00000525508 AMOTL1Q8IY63 956 aa10.05□□□□□ -0.8
CHD7-203ENST00000525508 STK3Q13188 491 aa10.05□□□□□ -0.8
CHD7-203ENST00000525508 BICDL1Q6ZP65 573 aa10.05□□□□□ -0.8
CHD7-203ENST00000525508 SRCIN1Q9C0H9 1055 aa10.05□□□□□ -0.8
CHD7-203ENST00000525508 PDE3AQ14432 1141 aa10.05□□□□□ -0.8
CHD7-203ENST00000525508 HSP90AA2PQ14568 343 aaPredicted RBP10.05□□□□□ -0.8
CHD7-203ENST00000525508 TMEM57Q8N5G2 664 aa10.05□□□□□ -0.8
CHD7-203ENST00000525508 CNNM1Q9NRU3 951 aa10.05□□□□□ -0.8
CHD7-203ENST00000525508 ERICH2A1L162 156 aa10.04□□□□□ -0.8
CHD7-203ENST00000525508 F6X3S4 739 aa10.04□□□□□ -0.8
CHD7-203ENST00000525508 VSIG10Q8N0Z9 540 aa10.04□□□□□ -0.8
CHD7-203ENST00000525508 CNTROBQ8N137 903 aa10.04□□□□□ -0.8
CHD7-203ENST00000525508 EHBP1L1Q8N3D4 1523 aa10.04□□□□□ -0.8
CHD7-203ENST00000525508 KIAA0586Q9BVV6 1533 aa10.04□□□□□ -0.8
CHD7-203ENST00000525508 BTBD11A6QL63 1104 aa10.03□□□□□ -0.8
CHD7-203ENST00000525508 ZNF608Q9ULD9 1512 aaPredicted RBP10.03□□□□□ -0.8
CHD7-203ENST00000525508 FKBP4Q02790 459 aaKnown RBP eCLIP10.03□□□□□ -0.8
CHD7-203ENST00000525508 CD109Q6YHK3 1445 aa10.03□□□□□ -0.8
CHD7-203ENST00000525508 ADAMTS2O95450 1211 aa10.03□□□□□ -0.8
CHD7-203ENST00000525508 MVPQ14764 893 aaKnown RBP10.03□□□□□ -0.8
CHD7-203ENST00000525508 FIBPO43427 364 aa10.03□□□□□ -0.8
CHD7-203ENST00000525508 FMNL2Q96PY5 1086 aa10.03□□□□□ -0.8
CHD7-203ENST00000525508 AMOTL2Q9Y2J4 779 aa10.03□□□□□ -0.8
CHD7-203ENST00000525508 TPM3P06753 285 aa10.02□□□□□ -0.8
CHD7-203ENST00000525508 SSH1Q8WYL5 1049 aa10.02□□□□□ -0.8
CHD7-203ENST00000525508 PCMTD1Q96MG8 357 aaPredicted RBP10.02□□□□□ -0.8
CHD7-203ENST00000525508 ANKRD30BQ9BXX2 1392 aa10.02□□□□□ -0.8
CHD7-203ENST00000525508 SMARCA5O60264 1052 aaPredicted RBP10.02□□□□□ -0.81
CHD7-203ENST00000525508 MPRIPQ6WCQ1 1025 aa10.02□□□□□ -0.81
CHD7-203ENST00000525508 KIF6Q6ZMV9 814 aa10.02□□□□□ -0.81
CHD7-203ENST00000525508 ABCC5O15440 1437 aa10.02□□□□□ -0.81
CHD7-203ENST00000525508 EFCAB5A4FU69 1503 aa10.02□□□□□ -0.81
CHD7-203ENST00000525508 SKOR2Q2VWA4 1001 aaPredicted RBP10.02□□□□□ -0.81
CHD7-203ENST00000525508 CTDP1Q9Y5B0 961 aaPredicted RBP10.02□□□□□ -0.81
CHD7-203ENST00000525508 FCHSD2O94868 740 aa10.01□□□□□ -0.81
CHD7-203ENST00000525508 IKQ13123 557 aaPredicted RBP10.01□□□□□ -0.81
CHD7-203ENST00000525508 CAVIN1Q6NZI2 390 aaKnown RBP10.01□□□□□ -0.81
CHD7-203ENST00000525508 SDF4Q9BRK5 362 aa10.01□□□□□ -0.81
CHD7-203ENST00000525508 NUCB2P80303 420 aa10.01□□□□□ -0.81
CHD7-203ENST00000525508 SLFN5Q08AF3 891 aa10.01□□□□□ -0.81
CHD7-203ENST00000525508 NFE2L2Q16236 605 aa10.01□□□□□ -0.81
CHD7-203ENST00000525508 NUTM1Q86Y26 1132 aa10.01□□□□□ -0.81
CHD7-203ENST00000525508 WDR63Q8IWG1 891 aa10.01□□□□□ -0.81
CHD7-203ENST00000525508 MAGI1Q96QZ7 1491 aaPredicted RBP10.01□□□□□ -0.81
CHD7-203ENST00000525508 FAM83GA6ND36 823 aa10.01□□□□□ -0.81
CHD7-203ENST00000525508 PRPF40AO75400 957 aaKnown RBP10.01□□□□□ -0.81
CHD7-203ENST00000525508 DUSP27Q5VZP5 1158 aa10.01□□□□□ -0.81
CHD7-203ENST00000525508 LRRCC1Q9C099 1032 aa10.01□□□□□ -0.81
CHD7-203ENST00000525508 ATP2B2Q01814 1243 aa10.01□□□□□ -0.81
CHD7-203ENST00000525508 CWC27Q6UX04 472 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms