RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 NBPF1Q3BBV0 1214 aa9.87□□□□□ -0.83
VPS11-201ENST00000524454 NUTM2AQ8IVF1 878 aaPredicted RBP9.87□□□□□ -0.83
VPS11-201ENST00000524454 ADGRB2O60241 1585 aa9.87□□□□□ -0.83
VPS11-201ENST00000524454 KIF1AQ12756 1690 aa9.86□□□□□ -0.83
VPS11-201ENST00000524454 QRICH2Q9H0J4 1663 aa9.85□□□□□ -0.83
VPS11-201ENST00000524454 FOXO3O43524 673 aa9.84□□□□□ -0.83
VPS11-201ENST00000524454 NBPF8Q3BBV2 869 aa9.84□□□□□ -0.83
VPS11-201ENST00000524454 SIRT1Q96EB6 747 aa9.84□□□□□ -0.83
VPS11-201ENST00000524454 RGS17Q9UGC6 210 aaPredicted RBP9.84□□□□□ -0.83
VPS11-201ENST00000524454 ROCK2O75116 1388 aaKnown RBP9.84□□□□□ -0.83
VPS11-201ENST00000524454 PNPLA6Q8IY17 1366 aa9.84□□□□□ -0.83
VPS11-201ENST00000524454 USP47Q96K76 1375 aa9.84□□□□□ -0.83
VPS11-201ENST00000524454 PXDNQ92626 1479 aa9.84□□□□□ -0.83
VPS11-201ENST00000524454 PLEKHG5O94827 1062 aa9.83□□□□□ -0.84
VPS11-201ENST00000524454 HSPA5P11021 654 aaKnown RBP9.83□□□□□ -0.84
VPS11-201ENST00000524454 MEX3CQ5U5Q3 659 aaKnown RBP9.83□□□□□ -0.84
VPS11-201ENST00000524454 PRR36Q9H6K5 1346 aa9.82□□□□□ -0.84
VPS11-201ENST00000524454 PMFBP1Q8TBY8 1022 aa9.82□□□□□ -0.84
VPS11-201ENST00000524454 LRRC59Q96AG4 307 aaKnown RBP9.82□□□□□ -0.84
VPS11-201ENST00000524454 CCDC7Q96M83 1385 aa9.82□□□□□ -0.84
VPS11-201ENST00000524454 ITSN1Q15811 1721 aa9.82□□□□□ -0.84
VPS11-201ENST00000524454 COL22A1Q8NFW1 1626 aaPredicted RBP9.82□□□□□ -0.84
VPS11-201ENST00000524454 TULP4Q9NRJ4 1543 aa9.82□□□□□ -0.84
VPS11-201ENST00000524454 SOS2Q07890 1332 aaPredicted RBP9.82□□□□□ -0.84
VPS11-201ENST00000524454 SPATA31A6Q5VVP1 1343 aa9.82□□□□□ -0.84
VPS11-201ENST00000524454 CCER2I3L3R5 266 aa9.81□□□□□ -0.84
VPS11-201ENST00000524454 CENPBP07199 599 aaPredicted RBP9.81□□□□□ -0.84
VPS11-201ENST00000524454 POTEAQ6S8J7 498 aa9.81□□□□□ -0.84
VPS11-201ENST00000524454 NPHP3Q7Z494 1330 aa9.81□□□□□ -0.84
VPS11-201ENST00000524454 TOPAZ1Q8N9V7 1692 aa9.8□□□□□ -0.84
VPS11-201ENST00000524454 TRPM3Q9HCF6 1732 aaPredicted RBP9.8□□□□□ -0.84
VPS11-201ENST00000524454 MARF1Q9Y4F3 1742 aaKnown RBP9.8□□□□□ -0.84
VPS11-201ENST00000524454 WASLO00401 505 aaPredicted RBP9.8□□□□□ -0.84
VPS11-201ENST00000524454 SLC24A1O60721 1099 aa9.8□□□□□ -0.84
VPS11-201ENST00000524454 ADAMTS2O95450 1211 aa9.8□□□□□ -0.84
VPS11-201ENST00000524454 PHF8Q9UPP1 1060 aa9.8□□□□□ -0.84
VPS11-201ENST00000524454 WASHC2AQ641Q2 1341 aa9.8□□□□□ -0.84
VPS11-201ENST00000524454 ABCA3Q99758 1704 aa9.79□□□□□ -0.84
VPS11-201ENST00000524454 NUBP1P53384 320 aa9.79□□□□□ -0.84
VPS11-201ENST00000524454 KRT28Q7Z3Y7 464 aa9.79□□□□□ -0.84
VPS11-201ENST00000524454 KLHL34Q8N239 644 aa9.79□□□□□ -0.84
VPS11-201ENST00000524454 ZBTB47Q9UFB7 747 aaPredicted RBP9.79□□□□□ -0.84
VPS11-201ENST00000524454 ANKARQ7Z5J8 1434 aa9.79□□□□□ -0.84
VPS11-201ENST00000524454 ATP7BP35670 1465 aa9.79□□□□□ -0.84
VPS11-201ENST00000524454 C8orf37Q96NL8 207 aa9.78□□□□□ -0.84
VPS11-201ENST00000524454 CDK19Q9BWU1 502 aa9.78□□□□□ -0.84
VPS11-201ENST00000524454 CENPJQ9HC77 1338 aaPredicted RBP9.78□□□□□ -0.84
VPS11-201ENST00000524454 LMOD2Q6P5Q4 547 aa9.77□□□□□ -0.85
VPS11-201ENST00000524454 CARD11Q9BXL7 1154 aa9.77□□□□□ -0.85
VPS11-201ENST00000524454 AFF2P51816 1311 aa9.77□□□□□ -0.85
VPS11-201ENST00000524454 ALS2Q96Q42 1657 aa9.77□□□□□ -0.85
VPS11-201ENST00000524454 KTN1Q86UP2 1357 aaKnown RBP9.76□□□□□ -0.85
VPS11-201ENST00000524454 C19orf67A6NJJ6 358 aa9.76□□□□□ -0.85
VPS11-201ENST00000524454 ANP32CO43423 234 aa9.76□□□□□ -0.85
VPS11-201ENST00000524454 PSME1Q06323 249 aa9.76□□□□□ -0.85
VPS11-201ENST00000524454 RASEFQ8IZ41 740 aa9.76□□□□□ -0.85
VPS11-201ENST00000524454 CABLES1Q8TDN4 633 aa9.76□□□□□ -0.85
VPS11-201ENST00000524454 NUDT16Q96DE0 195 aaKnown RBP9.76□□□□□ -0.85
VPS11-201ENST00000524454 CABP2Q9NPB3 220 aa9.76□□□□□ -0.85
VPS11-201ENST00000524454 SPATA31A3Q5VYP0 1347 aa9.76□□□□□ -0.85
VPS11-201ENST00000524454 EIF3AQ14152 1382 aaKnown RBP9.75□□□□□ -0.85
VPS11-201ENST00000524454 TNS3Q68CZ2 1445 aa9.75□□□□□ -0.85
VPS11-201ENST00000524454 SOCS7O14512 581 aa9.75□□□□□ -0.85
VPS11-201ENST00000524454 SRPK2P78362 688 aaKnown RBP9.75□□□□□ -0.85
VPS11-201ENST00000524454 DDX10Q13206 875 aaKnown RBP9.75□□□□□ -0.85
VPS11-201ENST00000524454 CRYBG1Q9Y4K1 1723 aa9.75□□□□□ -0.85
VPS11-201ENST00000524454 KIF7Q2M1P5 1343 aa9.75□□□□□ -0.85
VPS11-201ENST00000524454 SBNO2Q9Y2G9 1366 aa9.75□□□□□ -0.85
VPS11-201ENST00000524454 EVX2Q03828 476 aa9.74□□□□□ -0.85
VPS11-201ENST00000524454 NGDNQ8NEJ9 315 aaKnown RBP9.74□□□□□ -0.85
VPS11-201ENST00000524454 SPOCK2Q92563 424 aa9.74□□□□□ -0.85
VPS11-201ENST00000524454 PLCH1Q4KWH8 1693 aa9.74□□□□□ -0.85
VPS11-201ENST00000524454 PAK3O75914 559 aaPredicted RBP9.73□□□□□ -0.85
VPS11-201ENST00000524454 NGLY1Q96IV0 654 aa9.73□□□□□ -0.85
VPS11-201ENST00000524454 PPIP5K1Q6PFW1 1433 aa9.73□□□□□ -0.85
VPS11-201ENST00000524454 PHRF1Q9P1Y6 1649 aaKnown RBP9.72□□□□□ -0.85
VPS11-201ENST00000524454 CD44P16070 742 aaKnown RBP9.72□□□□□ -0.85
VPS11-201ENST00000524454 HAP1P54257 671 aaPredicted RBP9.72□□□□□ -0.85
VPS11-201ENST00000524454 NUTM2GQ5VZR2 741 aa9.72□□□□□ -0.85
VPS11-201ENST00000524454 ZNF772Q68DY9 489 aaPredicted RBP9.72□□□□□ -0.85
VPS11-201ENST00000524454 ACEP12821 1306 aa9.72□□□□□ -0.85
VPS11-201ENST00000524454 SBNO1A3KN83 1393 aa9.72□□□□□ -0.85
VPS11-201ENST00000524454 HAX1O00165 279 aa9.71□□□□□ -0.86
VPS11-201ENST00000524454 AKAP12Q02952 1782 aa9.7□□□□□ -0.86
VPS11-201ENST00000524454 CDCA8Q53HL2 280 aa9.7□□□□□ -0.86
VPS11-201ENST00000524454 USP21Q9UK80 565 aa9.7□□□□□ -0.86
VPS11-201ENST00000524454 CCDC61Q9Y6R9 512 aa9.7□□□□□ -0.86
VPS11-201ENST00000524454 ARHGEF10O15013 1369 aa9.7□□□□□ -0.86
VPS11-201ENST00000524454 POLR3AO14802 1390 aaPredicted RBP9.69□□□□□ -0.86
VPS11-201ENST00000524454 EVC2Q86UK5 1308 aa9.69□□□□□ -0.86
VPS11-201ENST00000524454 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.69□□□□□ -0.86
VPS11-201ENST00000524454 QTRT2Q9H974 415 aaKnown RBP9.69□□□□□ -0.86
VPS11-201ENST00000524454 CABP1Q9NZU7 370 aa9.69□□□□□ -0.86
VPS11-201ENST00000524454 NRAPQ86VF7 1730 aa9.68□□□□□ -0.86
VPS11-201ENST00000524454 BCL9LQ86UU0 1499 aa9.68□□□□□ -0.86
VPS11-201ENST00000524454 RGS12O14924 1447 aa9.68□□□□□ -0.86
VPS11-201ENST00000524454 ST20-MTHFSA0A0A6YYL1 179 aa9.68□□□□□ -0.86
VPS11-201ENST00000524454 PLEKHG3A1L390 1219 aa9.68□□□□□ -0.86
VPS11-201ENST00000524454 C11orf95C9JLR9 678 aaPredicted RBP9.68□□□□□ -0.86
VPS11-201ENST00000524454 RXRBP28702 533 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 163.3 ms