RNA–Protein interactions for RNA: ENST00000524432.5

MACF1-227, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 4,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-227ENST00000524432 SYCP2Q9BX26 1530 aa21.37■■□□□ 1.01
MACF1-227ENST00000524432 ATAD2Q6PL18 1390 aa21.37■■□□□ 1.01
MACF1-227ENST00000524432 UBTFL1P0CB47 393 aaPredicted RBP21.37■■□□□ 1.01
MACF1-227ENST00000524432 MRE11P49959 708 aa21.37■■□□□ 1.01
MACF1-227ENST00000524432 MCM10Q7L590 875 aa21.37■■□□□ 1.01
MACF1-227ENST00000524432 CAVIN1Q6NZI2 390 aaKnown RBP21.36■■□□□ 1.01
MACF1-227ENST00000524432 ABTB2Q8N961 1025 aa21.36■■□□□ 1.01
MACF1-227ENST00000524432 KIAA0556O60303 1618 aa21.36■■□□□ 1.01
MACF1-227ENST00000524432 RLBP1P12271 317 aa21.36■■□□□ 1.01
MACF1-227ENST00000524432 NUDT16Q96DE0 195 aaKnown RBP21.35■■□□□ 1.01
MACF1-227ENST00000524432 CCDC61Q9Y6R9 512 aa21.35■■□□□ 1.01
MACF1-227ENST00000524432 TRAPPC8Q9Y2L5 1435 aa21.35■■□□□ 1.01
MACF1-227ENST00000524432 IFIT2P09913 472 aaKnown RBP21.35■■□□□ 1.01
MACF1-227ENST00000524432 SPATA31E1Q6ZUB1 1445 aa21.34■■□□□ 1.01
MACF1-227ENST00000524432 C8orf34Q49A92 452 aa21.34■■□□□ 1.01
MACF1-227ENST00000524432 DMRT2Q9Y5R5 561 aa21.34■■□□□ 1.01
MACF1-227ENST00000524432 PRPF40AO75400 957 aaKnown RBP21.33■■□□□ 1.01
MACF1-227ENST00000524432 GNL2Q13823 731 aaKnown RBP21.33■■□□□ 1
MACF1-227ENST00000524432 CD109Q6YHK3 1445 aa21.33■■□□□ 1
MACF1-227ENST00000524432 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.33■■□□□ 1
MACF1-227ENST00000524432 TAF7LQ5H9L4 462 aa21.33■■□□□ 1
MACF1-227ENST00000524432 ADAMTS12P58397 1594 aa21.33■■□□□ 1
MACF1-227ENST00000524432 VPS37CA5D8V6 355 aaPredicted RBP21.32■■□□□ 1
MACF1-227ENST00000524432 HSP90AA2PQ14568 343 aaPredicted RBP21.32■■□□□ 1
MACF1-227ENST00000524432 KDM6BO15054 1643 aa21.31■■□□□ 1
MACF1-227ENST00000524432 FANCAO15360 1455 aa21.31■■□□□ 1
MACF1-227ENST00000524432 NASPP49321 788 aaPredicted RBP21.31■■□□□ 1
MACF1-227ENST00000524432 NPHP1O15259 732 aa21.31■■□□□ 1
MACF1-227ENST00000524432 SMARCA5O60264 1052 aaPredicted RBP21.31■■□□□ 1
MACF1-227ENST00000524432 FAM83GA6ND36 823 aa21.31■■□□□ 1
MACF1-227ENST00000524432 SEC24BO95487 1268 aa21.31■■□□□ 1
MACF1-227ENST00000524432 EXOC6BQ9Y2D4 811 aa21.3■■□□□ 1
MACF1-227ENST00000524432 PHF14O94880 888 aa21.3■■□□□ 1
MACF1-227ENST00000524432 GNAI3P08754 354 aa21.3■■□□□ 1
MACF1-227ENST00000524432 ZKSCAN1P17029 563 aaPredicted RBP21.3■■□□□ 1
MACF1-227ENST00000524432 K7ELQ4 463 aaPredicted RBP21.3■■□□□ 1
MACF1-227ENST00000524432 ZNF692Q9BU19 519 aaPredicted RBP21.3■■□□□ 1
MACF1-227ENST00000524432 GOLGA6L6A8MZA4 724 aa21.29■■□□□ 1
MACF1-227ENST00000524432 GNAI2P04899 355 aa21.29■■□□□ 1
MACF1-227ENST00000524432 NEXNQ0ZGT2 675 aa21.29■■□□□ 1
MACF1-227ENST00000524432 RABEP1Q15276 862 aa21.29■■□□□ 1
MACF1-227ENST00000524432 CCDC30Q5VVM6 783 aa21.29■■□□□ 1
MACF1-227ENST00000524432 RNF123Q5XPI4 1314 aa21.29■■□□□ 1
MACF1-227ENST00000524432 PLCH2O75038 1416 aa21.29■■□□□ 1
MACF1-227ENST00000524432 FYB1O15117 783 aa21.28■■□□□ 1
MACF1-227ENST00000524432 MAP4K4O95819 1239 aaPredicted RBP21.28■■□□□ 1
MACF1-227ENST00000524432 HDGFL1Q5TGJ6 251 aa21.28■■□□□ 1
MACF1-227ENST00000524432 RUFY2Q8WXA3 655 aa21.28■■□□□ 1
MACF1-227ENST00000524432 IL1RAPL2Q9NP60 686 aa21.28■■□□□ 1
MACF1-227ENST00000524432 DNMT1P26358 1616 aaKnown RBP21.28■■□□□ 1
MACF1-227ENST00000524432 FAM43AQ8N2R8 423 aa21.28■■□□□ 1
MACF1-227ENST00000524432 GAS2L2Q8NHY3 880 aa21.28■■□□□ 1
MACF1-227ENST00000524432 NRDCO43847 1150 aa21.28■■□□□ 1
MACF1-227ENST00000524432 G3BP1Q13283 466 aaKnown RBP eCLIP21.28■■□□□ 12e-6■■■□□ 14.7
MACF1-227ENST00000524432 SMC3Q9UQE7 1217 aa21.27■■□□□ 1
MACF1-227ENST00000524432 F6X3S4 739 aa21.26■□□□□ 0.99
MACF1-227ENST00000524432 ATP6V1DQ9Y5K8 247 aa21.26■□□□□ 0.99
MACF1-227ENST00000524432 CSPP1Q1MSJ5 1256 aa21.25■□□□□ 0.99
MACF1-227ENST00000524432 SAMD9Q5K651 1589 aa21.25■□□□□ 0.99
MACF1-227ENST00000524432 H3BQV1 296 aa21.25■□□□□ 0.99
MACF1-227ENST00000524432 IFFO2Q5TF58 517 aa21.25■□□□□ 0.99
MACF1-227ENST00000524432 MPNDQ8N594 471 aa21.25■□□□□ 0.99
MACF1-227ENST00000524432 CCDC27Q2M243 656 aa21.25■□□□□ 0.99
MACF1-227ENST00000524432 UHRF1BP1Q6BDS2 1440 aa21.25■□□□□ 0.99
MACF1-227ENST00000524432 ASXL1Q8IXJ9 1541 aa21.25■□□□□ 0.99
MACF1-227ENST00000524432 HTATSF1O43719 755 aaKnown RBP21.24■□□□□ 0.99
MACF1-227ENST00000524432 A2MP01023 1474 aa21.24■□□□□ 0.99
MACF1-227ENST00000524432 FAM184AQ8NB25 1140 aa21.24■□□□□ 0.99
MACF1-227ENST00000524432 TTC5Q8N0Z6 440 aa21.23■□□□□ 0.99
MACF1-227ENST00000524432 TBC1D32Q96NH3 1257 aa21.23■□□□□ 0.99
MACF1-227ENST00000524432 ITSN2Q9NZM3 1697 aa21.23■□□□□ 0.99
MACF1-227ENST00000524432 KDM5BQ9UGL1 1544 aa21.23■□□□□ 0.99
MACF1-227ENST00000524432 CLASRPQ8N2M8 674 aaKnown RBP21.23■□□□□ 0.99
MACF1-227ENST00000524432 NLRP2Q9NX02 1062 aa21.23■□□□□ 0.99
MACF1-227ENST00000524432 ERC2O15083 957 aa21.23■□□□□ 0.99
MACF1-227ENST00000524432 GRPEL1Q9HAV7 217 aa21.23■□□□□ 0.99
MACF1-227ENST00000524432 FOSBP53539 338 aa21.22■□□□□ 0.99
MACF1-227ENST00000524432 RIC3Q7Z5B4 369 aa21.22■□□□□ 0.99
MACF1-227ENST00000524432 ALDH1L2Q3SY69 923 aa21.22■□□□□ 0.99
MACF1-227ENST00000524432 SF3A1Q15459 793 aaKnown RBP21.21■□□□□ 0.99
MACF1-227ENST00000524432 ESCO1Q5FWF5 840 aa21.21■□□□□ 0.99
MACF1-227ENST00000524432 LRRCC1Q9C099 1032 aa21.21■□□□□ 0.99
MACF1-227ENST00000524432 KIF21AQ7Z4S6 1674 aa21.21■□□□□ 0.99
MACF1-227ENST00000524432 TOMM22Q9NS69 142 aa21.21■□□□□ 0.99
MACF1-227ENST00000524432 DDX58O95786 925 aaKnown RBP21.2■□□□□ 0.99
MACF1-227ENST00000524432 FAM13BQ9NYF5 915 aa21.2■□□□□ 0.98
MACF1-227ENST00000524432 RPAP2Q8IXW5 612 aaPredicted RBP21.2■□□□□ 0.98
MACF1-227ENST00000524432 ABCA5Q8WWZ7 1642 aa21.2■□□□□ 0.98
MACF1-227ENST00000524432 ARHGEF12Q9NZN5 1544 aa21.2■□□□□ 0.98
MACF1-227ENST00000524432 CCT4P50991 539 aaKnown RBP21.19■□□□□ 0.98
MACF1-227ENST00000524432 ZRANB1Q9UGI0 708 aa21.19■□□□□ 0.98
MACF1-227ENST00000524432 UPF3BQ9BZI7 483 aaKnown RBP21.19■□□□□ 0.98
MACF1-227ENST00000524432 MBIPQ9NS73 344 aa21.19■□□□□ 0.98
MACF1-227ENST00000524432 IFT57Q9NWB7 429 aa21.19■□□□□ 0.98
MACF1-227ENST00000524432 HSP90AB4PQ58FF6 505 aa21.19■□□□□ 0.98
MACF1-227ENST00000524432 TULP1O00294 542 aaPredicted RBP21.18■□□□□ 0.98
MACF1-227ENST00000524432 COL17A1Q9UMD9 1497 aaPredicted RBP21.18■□□□□ 0.98
MACF1-227ENST00000524432 DUOX2Q9NRD8 1548 aa21.18■□□□□ 0.98
MACF1-227ENST00000524432 WASLO00401 505 aaPredicted RBP21.18■□□□□ 0.98
MACF1-227ENST00000524432 RAPGEF4Q8WZA2 1011 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms