RNA–Protein interactions for RNA: ENST00000524306.1

CLINT1-208, Transcript of clathrin interactor 1, humanhuman

TSL 1 (best)

Gene CLINT1, Length 2,905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-208ENST00000524306 VIRMAQ69YN4 1812 aaKnown RBP7.08□□□□□ -1.28
CLINT1-208ENST00000524306 KCNA4P22459 653 aa7.08□□□□□ -1.28
CLINT1-208ENST00000524306 DDRGK1Q96HY6 314 aa7.08□□□□□ -1.28
CLINT1-208ENST00000524306 TERF2IPQ9NYB0 399 aa7.08□□□□□ -1.28
CLINT1-208ENST00000524306 NALCNQ8IZF0 1738 aa7.08□□□□□ -1.28
CLINT1-208ENST00000524306 CHGAP10645 457 aaKnown RBP7.08□□□□□ -1.28
CLINT1-208ENST00000524306 CHD2O14647 1828 aaKnown RBP7.08□□□□□ -1.28
CLINT1-208ENST00000524306 ADAMTS13Q76LX8 1427 aa7.07□□□□□ -1.28
CLINT1-208ENST00000524306 SALL2Q9Y467 1007 aaPredicted RBP7.07□□□□□ -1.28
CLINT1-208ENST00000524306 PPIP5K1Q6PFW1 1433 aa7.07□□□□□ -1.28
CLINT1-208ENST00000524306 PLIN1O60240 522 aa7.07□□□□□ -1.28
CLINT1-208ENST00000524306 TMEM132EQ6IEE7 984 aa7.07□□□□□ -1.28
CLINT1-208ENST00000524306 MYH16Q9H6N6 1097 aa7.07□□□□□ -1.28
CLINT1-208ENST00000524306 SPINK5Q9NQ38 1064 aaPredicted RBP7.07□□□□□ -1.28
CLINT1-208ENST00000524306 USP35Q9P2H5 1018 aa7.07□□□□□ -1.28
CLINT1-208ENST00000524306 MTHFSP49914 203 aa7.07□□□□□ -1.28
CLINT1-208ENST00000524306 C20orf194Q5TEA3 1177 aa7.07□□□□□ -1.28
CLINT1-208ENST00000524306 PLEKHF1Q96S99 279 aa7.07□□□□□ -1.28
CLINT1-208ENST00000524306 ZBTB47Q9UFB7 747 aaPredicted RBP7.07□□□□□ -1.28
CLINT1-208ENST00000524306 CPSF1Q10570 1443 aaKnown RBP7.06□□□□□ -1.28
CLINT1-208ENST00000524306 TCP11L2Q8N4U5 519 aa7.06□□□□□ -1.28
CLINT1-208ENST00000524306 AATKQ6ZMQ8 1374 aa7.06□□□□□ -1.28
CLINT1-208ENST00000524306 MAPK8IP3Q9UPT6 1336 aa7.06□□□□□ -1.28
CLINT1-208ENST00000524306 RARSP54136 660 aaKnown RBP7.06□□□□□ -1.28
CLINT1-208ENST00000524306 BRPF1P55201 1214 aaPredicted RBP7.06□□□□□ -1.28
CLINT1-208ENST00000524306 FAM161AQ3B820 660 aa7.06□□□□□ -1.28
CLINT1-208ENST00000524306 CCDC146Q8IYE0 955 aa7.06□□□□□ -1.28
CLINT1-208ENST00000524306 ZNF428Q96B54 188 aa7.06□□□□□ -1.28
CLINT1-208ENST00000524306 FMN2Q9NZ56 1722 aa7.05□□□□□ -1.28
CLINT1-208ENST00000524306 EDC4Q6P2E9 1401 aaKnown RBP7.05□□□□□ -1.28
CLINT1-208ENST00000524306 HDGFL2Q7Z4V5 671 aaPredicted RBP7.04□□□□□ -1.28
CLINT1-208ENST00000524306 PMFBP1Q8TBY8 1022 aa7.04□□□□□ -1.28
CLINT1-208ENST00000524306 FYB1O15117 783 aa7.04□□□□□ -1.28
CLINT1-208ENST00000524306 CLUAP1Q96AJ1 413 aa7.04□□□□□ -1.28
CLINT1-208ENST00000524306 PHRF1Q9P1Y6 1649 aaKnown RBP7.04□□□□□ -1.28
CLINT1-208ENST00000524306 CDK12Q9NYV4 1490 aaPredicted RBP7.04□□□□□ -1.28
CLINT1-208ENST00000524306 ANKARQ7Z5J8 1434 aa7.04□□□□□ -1.28
CLINT1-208ENST00000524306 DMRT2Q9Y5R5 561 aa7.04□□□□□ -1.28
CLINT1-208ENST00000524306 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.03□□□□□ -1.28
CLINT1-208ENST00000524306 MAPK8IP2Q13387 824 aaPredicted RBP7.03□□□□□ -1.28
CLINT1-208ENST00000524306 C8orf34Q49A92 452 aa7.03□□□□□ -1.28
CLINT1-208ENST00000524306 PRAM1Q96QH2 718 aa7.03□□□□□ -1.28
CLINT1-208ENST00000524306 PPM1GO15355 546 aaPredicted RBP7.03□□□□□ -1.28
CLINT1-208ENST00000524306 BCAR3O75815 825 aa7.03□□□□□ -1.28
CLINT1-208ENST00000524306 FCHSD2O94868 740 aa7.03□□□□□ -1.28
CLINT1-208ENST00000524306 CABP2Q9NPB3 220 aa7.03□□□□□ -1.28
CLINT1-208ENST00000524306 PAK3O75914 559 aaPredicted RBP7.02□□□□□ -1.29
CLINT1-208ENST00000524306 NCOA3Q9Y6Q9 1424 aa7.02□□□□□ -1.29
CLINT1-208ENST00000524306 SENP3-EIF4A1A0A087X0R7 540 aa7.02□□□□□ -1.29
CLINT1-208ENST00000524306 ALDH1L2Q3SY69 923 aa7.02□□□□□ -1.29
CLINT1-208ENST00000524306 CDK19Q9BWU1 502 aa7.02□□□□□ -1.29
CLINT1-208ENST00000524306 TMPOP42166 694 aaKnown RBP7.01□□□□□ -1.29
CLINT1-208ENST00000524306 SRPK2P78362 688 aaKnown RBP7.01□□□□□ -1.29
CLINT1-208ENST00000524306 POGKQ9P215 609 aa7.01□□□□□ -1.29
CLINT1-208ENST00000524306 TBX22Q9Y458 520 aa7.01□□□□□ -1.29
CLINT1-208ENST00000524306 MST1RQ04912 1400 aa7.01□□□□□ -1.29
CLINT1-208ENST00000524306 DIAPH1O60610 1272 aaKnown RBP7□□□□□ -1.29
CLINT1-208ENST00000524306 CALD1Q05682 793 aaKnown RBP7□□□□□ -1.29
CLINT1-208ENST00000524306 FBXO31Q5XUX0 539 aaPredicted RBP7□□□□□ -1.29
CLINT1-208ENST00000524306 ESF1Q9H501 851 aaKnown RBP7□□□□□ -1.29
CLINT1-208ENST00000524306 TRIM35Q9UPQ4 493 aa7□□□□□ -1.29
CLINT1-208ENST00000524306 KIF1AQ12756 1690 aa7□□□□□ -1.29
CLINT1-208ENST00000524306 U2AF1L5P0DN76 240 aaPredicted RBP7□□□□□ -1.29
CLINT1-208ENST00000524306 U2AF1Q01081 240 aaKnown RBP eCLIP7□□□□□ -1.29
CLINT1-208ENST00000524306 HDAC1Q13547 482 aaPredicted RBP7□□□□□ -1.29
CLINT1-208ENST00000524306 MVPQ14764 893 aaKnown RBP7□□□□□ -1.29
CLINT1-208ENST00000524306 ZKSCAN2Q63HK3 967 aa7□□□□□ -1.29
CLINT1-208ENST00000524306 KIF24Q5T7B8 1368 aa6.99□□□□□ -1.29
CLINT1-208ENST00000524306 WASLO00401 505 aaPredicted RBP6.99□□□□□ -1.29
CLINT1-208ENST00000524306 ARHGAP45Q92619 1136 aa6.99□□□□□ -1.29
CLINT1-208ENST00000524306 ZNF692Q9BU19 519 aaPredicted RBP6.99□□□□□ -1.29
CLINT1-208ENST00000524306 CHMP4BQ9H444 224 aaKnown RBP6.99□□□□□ -1.29
CLINT1-208ENST00000524306 RWDD1Q9H446 243 aaPredicted RBP6.99□□□□□ -1.29
CLINT1-208ENST00000524306 KIF16BQ96L93 1317 aa6.99□□□□□ -1.29
CLINT1-208ENST00000524306 IGHDP01880 384 aa6.99□□□□□ -1.29
CLINT1-208ENST00000524306 MARF1Q9Y4F3 1742 aaKnown RBP6.98□□□□□ -1.29
CLINT1-208ENST00000524306 THEMISQ8N1K5 641 aaPredicted RBP6.98□□□□□ -1.29
CLINT1-208ENST00000524306 RSPH6AQ9H0K4 717 aa6.98□□□□□ -1.29
CLINT1-208ENST00000524306 RGPD1P0DJD0 1748 aa6.98□□□□□ -1.29
CLINT1-208ENST00000524306 METP08581 1390 aa6.98□□□□□ -1.29
CLINT1-208ENST00000524306 MINK1Q8N4C8 1332 aaPredicted RBP6.98□□□□□ -1.29
CLINT1-208ENST00000524306 ABCC6O95255 1503 aa6.98□□□□□ -1.29
CLINT1-208ENST00000524306 DDX19BQ9UMR2 479 aa6.98□□□□□ -1.29
CLINT1-208ENST00000524306 SSH2Q76I76 1423 aa6.98□□□□□ -1.29
CLINT1-208ENST00000524306 IPO8O15397 1037 aaKnown RBP6.97□□□□□ -1.29
CLINT1-208ENST00000524306 DZIP1LQ8IYY4 767 aaKnown RBP6.97□□□□□ -1.29
CLINT1-208ENST00000524306 CABP1Q9NZU7 370 aa6.97□□□□□ -1.29
CLINT1-208ENST00000524306 POLKQ9UBT6 870 aa6.97□□□□□ -1.29
CLINT1-208ENST00000524306 LMTK3Q96Q04 1460 aa6.97□□□□□ -1.29
CLINT1-208ENST00000524306 ZNF853P0CG23 659 aa6.97□□□□□ -1.29
CLINT1-208ENST00000524306 CANXP27824 592 aaKnown RBP6.97□□□□□ -1.29
CLINT1-208ENST00000524306 LMOD3Q0VAK6 560 aa6.97□□□□□ -1.29
CLINT1-208ENST00000524306 GGNBP2Q9H3C7 697 aa6.97□□□□□ -1.29
CLINT1-208ENST00000524306 STK26Q9P289 416 aa6.97□□□□□ -1.29
CLINT1-208ENST00000524306 STAG3Q9UJ98 1225 aa6.97□□□□□ -1.29
CLINT1-208ENST00000524306 DCCP43146 1447 aa6.97□□□□□ -1.29
CLINT1-208ENST00000524306 IL13P35225 146 aa6.97□□□□□ -1.29
CLINT1-208ENST00000524306 PANK1Q8TE04 598 aa6.97□□□□□ -1.29
CLINT1-208ENST00000524306 PTPRUQ92729 1446 aa6.97□□□□□ -1.29
CLINT1-208ENST00000524306 COG6Q9Y2V7 657 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms