RNA–Protein interactions for RNA: ENST00000524115.2

NKX6-3-202, Transcript of NK6 homeobox 3, humanhuman

TSL 2 BASIC

Gene NKX6-3, Length 1,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-202ENST00000524115 PRAM1Q96QH2 718 aa29.51■■■□□ 2.31
NKX6-3-202ENST00000524115 SPATA31A6Q5VVP1 1343 aa29.51■■■□□ 2.31
NKX6-3-202ENST00000524115 ZNF521Q96K83 1311 aa29.5■■■□□ 2.31
NKX6-3-202ENST00000524115 GOLGA2Q08379 1002 aa29.5■■■□□ 2.31
NKX6-3-202ENST00000524115 ESCO1Q5FWF5 840 aa29.5■■■□□ 2.31
NKX6-3-202ENST00000524115 ERICH6Q7L0X2 663 aa29.5■■■□□ 2.31
NKX6-3-202ENST00000524115 EXOC6Q8TAG9 804 aa29.5■■■□□ 2.31
NKX6-3-202ENST00000524115 NUTM2FA1L443 756 aa29.49■■■□□ 2.31
NKX6-3-202ENST00000524115 SOCS7O14512 581 aa29.48■■■□□ 2.31
NKX6-3-202ENST00000524115 SAFB2Q14151 953 aaKnown RBP eCLIP29.48■■■□□ 2.31
NKX6-3-202ENST00000524115 TRAK1Q9UPV9 953 aa29.48■■■□□ 2.31
NKX6-3-202ENST00000524115 CDC42BPGQ6DT37 1551 aa29.48■■■□□ 2.31
NKX6-3-202ENST00000524115 KNDC1Q76NI1 1749 aa29.48■■■□□ 2.31
NKX6-3-202ENST00000524115 QRICH2Q9H0J4 1663 aa29.47■■■□□ 2.31
NKX6-3-202ENST00000524115 TCERG1O14776 1098 aaKnown RBP29.47■■■□□ 2.31
NKX6-3-202ENST00000524115 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.47■■■□□ 2.31
NKX6-3-202ENST00000524115 POGKQ9P215 609 aa29.47■■■□□ 2.31
NKX6-3-202ENST00000524115 POLR3AO14802 1390 aaPredicted RBP29.47■■■□□ 2.31
NKX6-3-202ENST00000524115 USP32Q8NFA0 1604 aa29.46■■■□□ 2.31
NKX6-3-202ENST00000524115 SOS2Q07890 1332 aaPredicted RBP29.44■■■□□ 2.3
NKX6-3-202ENST00000524115 MSH5O43196 834 aa29.43■■■□□ 2.3
NKX6-3-202ENST00000524115 CARD14Q9BXL6 1004 aa29.43■■■□□ 2.3
NKX6-3-202ENST00000524115 NHSL1Q5SYE7 1610 aa29.43■■■□□ 2.3
NKX6-3-202ENST00000524115 MS4A1P11836 297 aa29.42■■■□□ 2.3
NKX6-3-202ENST00000524115 DLC1Q96QB1 1528 aa29.41■■■□□ 2.3
NKX6-3-202ENST00000524115 DUSP27Q5VZP5 1158 aa29.41■■■□□ 2.3
NKX6-3-202ENST00000524115 NUTM2BA6NNL0 878 aaPredicted RBP29.4■■■□□ 2.3
NKX6-3-202ENST00000524115 NUTM2EB1AL46 878 aaPredicted RBP29.4■■■□□ 2.3
NKX6-3-202ENST00000524115 NUTM2AQ8IVF1 878 aaPredicted RBP29.4■■■□□ 2.3
NKX6-3-202ENST00000524115 FOXO3O43524 673 aa29.4■■■□□ 2.3
NKX6-3-202ENST00000524115 MEX3CQ5U5Q3 659 aaKnown RBP29.4■■■□□ 2.3
NKX6-3-202ENST00000524115 LRP6O75581 1613 aa29.4■■■□□ 2.3
NKX6-3-202ENST00000524115 SLFN5Q08AF3 891 aa29.39■■■□□ 2.3
NKX6-3-202ENST00000524115 NPHP3Q7Z494 1330 aa29.39■■■□□ 2.29
NKX6-3-202ENST00000524115 EVC2Q86UK5 1308 aa29.39■■■□□ 2.29
NKX6-3-202ENST00000524115 NSD2O96028 1365 aa29.38■■■□□ 2.29
NKX6-3-202ENST00000524115 PNPLA6Q8IY17 1366 aa29.38■■■□□ 2.29
NKX6-3-202ENST00000524115 POTEAQ6S8J7 498 aa29.37■■■□□ 2.29
NKX6-3-202ENST00000524115 TRMT2AQ8IZ69 625 aaKnown RBP29.37■■■□□ 2.29
NKX6-3-202ENST00000524115 NINLQ9Y2I6 1382 aa29.37■■■□□ 2.29
NKX6-3-202ENST00000524115 NSD3Q9BZ95 1437 aa29.36■■■□□ 2.29
NKX6-3-202ENST00000524115 SHPRHQ149N8 1683 aa29.36■■■□□ 2.29
NKX6-3-202ENST00000524115 E9PSI1 815 aa29.34■■■□□ 2.29
NKX6-3-202ENST00000524115 ANP32AP39687 249 aaKnown RBP29.34■■■□□ 2.29
NKX6-3-202ENST00000524115 XPCQ01831 940 aaPredicted RBP29.34■■■□□ 2.29
NKX6-3-202ENST00000524115 MORC1Q86VD1 984 aa29.34■■■□□ 2.29
NKX6-3-202ENST00000524115 CGNL1Q0VF96 1302 aa29.33■■■□□ 2.29
NKX6-3-202ENST00000524115 MINK1Q8N4C8 1332 aaPredicted RBP29.33■■■□□ 2.29
NKX6-3-202ENST00000524115 NCBP3Q53F19 620 aaKnown RBP29.31■■■□□ 2.28
NKX6-3-202ENST00000524115 ARHGEF28Q8N1W1 1705 aaKnown RBP29.31■■■□□ 2.28
NKX6-3-202ENST00000524115 CRBNQ96SW2 442 aa29.31■■■□□ 2.28
NKX6-3-202ENST00000524115 PHF8Q9UPP1 1060 aa29.3■■■□□ 2.28
NKX6-3-202ENST00000524115 ANKRD36BQ8N2N9 1353 aa29.29■■■□□ 2.28
NKX6-3-202ENST00000524115 CFAP53Q96M91 514 aa29.28■■■□□ 2.28
NKX6-3-202ENST00000524115 FMN2Q9NZ56 1722 aa29.28■■■□□ 2.28
NKX6-3-202ENST00000524115 PXDNQ92626 1479 aa29.27■■■□□ 2.28
NKX6-3-202ENST00000524115 WASLO00401 505 aaPredicted RBP29.27■■■□□ 2.28
NKX6-3-202ENST00000524115 APAF1O14727 1248 aa29.27■■■□□ 2.28
NKX6-3-202ENST00000524115 ZNF772Q68DY9 489 aaPredicted RBP29.26■■■□□ 2.27
NKX6-3-202ENST00000524115 PLIN1O60240 522 aa29.25■■■□□ 2.27
NKX6-3-202ENST00000524115 KRT28Q7Z3Y7 464 aa29.25■■■□□ 2.27
NKX6-3-202ENST00000524115 SLC12A5Q9H2X9 1139 aa29.25■■■□□ 2.27
NKX6-3-202ENST00000524115 ANKARQ7Z5J8 1434 aa29.23■■■□□ 2.27
NKX6-3-202ENST00000524115 ADAMTS2O95450 1211 aa29.23■■■□□ 2.27
NKX6-3-202ENST00000524115 CCDC146Q8IYE0 955 aa29.23■■■□□ 2.27
NKX6-3-202ENST00000524115 TULP4Q9NRJ4 1543 aa29.22■■■□□ 2.27
NKX6-3-202ENST00000524115 C8orf37Q96NL8 207 aa29.22■■■□□ 2.27
NKX6-3-202ENST00000524115 CENPQQ7L2Z9 268 aaPredicted RBP29.21■■■□□ 2.27
NKX6-3-202ENST00000524115 PMFBP1Q8TBY8 1022 aa29.21■■■□□ 2.27
NKX6-3-202ENST00000524115 RUNDC1Q96C34 613 aa29.21■■■□□ 2.27
NKX6-3-202ENST00000524115 NOP58Q9Y2X3 529 aaKnown RBP29.21■■■□□ 2.27
NKX6-3-202ENST00000524115 ADGRB2O60241 1585 aa29.21■■■□□ 2.27
NKX6-3-202ENST00000524115 PRR36Q9H6K5 1346 aa29.2■■■□□ 2.27
NKX6-3-202ENST00000524115 IPO9Q96P70 1041 aaKnown RBP29.2■■■□□ 2.26
NKX6-3-202ENST00000524115 AFF2P51816 1311 aa29.2■■■□□ 2.26
NKX6-3-202ENST00000524115 SPATA31A3Q5VYP0 1347 aa29.2■■■□□ 2.26
NKX6-3-202ENST00000524115 PSME1Q06323 249 aa29.19■■■□□ 2.26
NKX6-3-202ENST00000524115 ATAD2Q6PL18 1390 aa29.19■■■□□ 2.26
NKX6-3-202ENST00000524115 NGLY1Q96IV0 654 aa29.16■■■□□ 2.26
NKX6-3-202ENST00000524115 KIF1AQ12756 1690 aa29.16■■■□□ 2.26
NKX6-3-202ENST00000524115 CCDC27Q2M243 656 aa29.15■■■□□ 2.26
NKX6-3-202ENST00000524115 PDE4AP27815 886 aa29.15■■■□□ 2.26
NKX6-3-202ENST00000524115 WDR63Q8IWG1 891 aa29.15■■■□□ 2.26
NKX6-3-202ENST00000524115 CDK19Q9BWU1 502 aa29.15■■■□□ 2.26
NKX6-3-202ENST00000524115 BACH2Q9BYV9 841 aa29.14■■■□□ 2.26
NKX6-3-202ENST00000524115 KDM2BQ8NHM5 1336 aa29.14■■■□□ 2.25
NKX6-3-202ENST00000524115 NUDT16Q96DE0 195 aaKnown RBP29.13■■■□□ 2.25
NKX6-3-202ENST00000524115 WWC1Q8IX03 1113 aa29.12■■■□□ 2.25
NKX6-3-202ENST00000524115 AAMPQ13685 434 aa29.12■■■□□ 2.25
NKX6-3-202ENST00000524115 PDE3AQ14432 1141 aa29.12■■■□□ 2.25
NKX6-3-202ENST00000524115 SBNO1A3KN83 1393 aa29.11■■■□□ 2.25
NKX6-3-202ENST00000524115 TERF2IPQ9NYB0 399 aa29.1■■■□□ 2.25
NKX6-3-202ENST00000524115 RXRBP28702 533 aa29.09■■■□□ 2.25
NKX6-3-202ENST00000524115 C20orf194Q5TEA3 1177 aa29.09■■■□□ 2.25
NKX6-3-202ENST00000524115 COL22A1Q8NFW1 1626 aaPredicted RBP29.09■■■□□ 2.25
NKX6-3-202ENST00000524115 RGPD8O14715 1765 aaPredicted RBP29.09■■■□□ 2.25
NKX6-3-202ENST00000524115 MTHFSP49914 203 aa29.09■■■□□ 2.25
NKX6-3-202ENST00000524115 NGDNQ8NEJ9 315 aaKnown RBP29.09■■■□□ 2.25
NKX6-3-202ENST00000524115 QTRT2Q9H974 415 aaKnown RBP29.09■■■□□ 2.25
NKX6-3-202ENST00000524115 ZBTB47Q9UFB7 747 aaPredicted RBP29.09■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms