RNA–Protein interactions for RNA: ENST00000522698.1

EXTL3-211, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 4

Gene EXTL3, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-211ENST00000522698 COL22A1Q8NFW1 1626 aaPredicted RBP19.44■□□□□ 0.7
EXTL3-211ENST00000522698 USP21Q9UK80 565 aa19.44■□□□□ 0.7
EXTL3-211ENST00000522698 TRPC5Q9UL62 973 aaPredicted RBP19.43■□□□□ 0.7
EXTL3-211ENST00000522698 PXDNQ92626 1479 aa19.42■□□□□ 0.7
EXTL3-211ENST00000522698 PLEKHG3A1L390 1219 aa19.42■□□□□ 0.7
EXTL3-211ENST00000522698 XPCQ01831 940 aaPredicted RBP19.42■□□□□ 0.7
EXTL3-211ENST00000522698 ESCO1Q5FWF5 840 aa19.42■□□□□ 0.7
EXTL3-211ENST00000522698 SLC12A5Q9H2X9 1139 aa19.42■□□□□ 0.7
EXTL3-211ENST00000522698 CPSF1Q10570 1443 aaKnown RBP19.42■□□□□ 0.7
EXTL3-211ENST00000522698 NRKQ7Z2Y5 1582 aa19.41■□□□□ 0.7
EXTL3-211ENST00000522698 CABP1Q9NZU7 370 aa19.41■□□□□ 0.7
EXTL3-211ENST00000522698 NPHP3Q7Z494 1330 aa19.41■□□□□ 0.7
EXTL3-211ENST00000522698 POLR3AO14802 1390 aaPredicted RBP19.41■□□□□ 0.7
EXTL3-211ENST00000522698 ANKRD36BQ8N2N9 1353 aa19.41■□□□□ 0.7
EXTL3-211ENST00000522698 SRCAPQ6ZRS2 3230 aa19.41■□□□□ 0.7
EXTL3-211ENST00000522698 FNBP4Q8N3X1 1017 aaPredicted RBP19.4■□□□□ 0.7
EXTL3-211ENST00000522698 TMC1Q8TDI8 760 aa19.4■□□□□ 0.7
EXTL3-211ENST00000522698 MARF1Q9Y4F3 1742 aaKnown RBP19.39■□□□□ 0.7
EXTL3-211ENST00000522698 ATRNO75882 1429 aa19.39■□□□□ 0.69
EXTL3-211ENST00000522698 A0A1W2PP64 1363 aa19.38■□□□□ 0.69
EXTL3-211ENST00000522698 FOXO3O43524 673 aa19.38■□□□□ 0.69
EXTL3-211ENST00000522698 PHF8Q9UPP1 1060 aa19.38■□□□□ 0.69
EXTL3-211ENST00000522698 DDX10Q13206 875 aaKnown RBP19.37■□□□□ 0.69
EXTL3-211ENST00000522698 ACEP12821 1306 aa19.36■□□□□ 0.69
EXTL3-211ENST00000522698 EP400Q96L91 3159 aa19.36■□□□□ 0.69
EXTL3-211ENST00000522698 TRPM3Q9HCF6 1732 aaPredicted RBP19.36■□□□□ 0.69
EXTL3-211ENST00000522698 PMFBP1Q8TBY8 1022 aa19.35■□□□□ 0.69
EXTL3-211ENST00000522698 PANK3Q9H999 370 aa19.35■□□□□ 0.69
EXTL3-211ENST00000522698 TERF2IPQ9NYB0 399 aa19.35■□□□□ 0.69
EXTL3-211ENST00000522698 ZRANB1Q9UGI0 708 aa19.35■□□□□ 0.69
EXTL3-211ENST00000522698 BCL9LQ86UU0 1499 aa19.35■□□□□ 0.69
EXTL3-211ENST00000522698 USP6P35125 1406 aa19.34■□□□□ 0.69
EXTL3-211ENST00000522698 KIF20BQ96Q89 1820 aa19.34■□□□□ 0.69
EXTL3-211ENST00000522698 SSH2Q76I76 1423 aa19.34■□□□□ 0.69
EXTL3-211ENST00000522698 CCDC125Q86Z20 511 aa19.33■□□□□ 0.68
EXTL3-211ENST00000522698 CARD14Q9BXL6 1004 aa19.33■□□□□ 0.68
EXTL3-211ENST00000522698 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.33■□□□□ 0.68
EXTL3-211ENST00000522698 PER1O15534 1290 aaPredicted RBP19.32■□□□□ 0.68
EXTL3-211ENST00000522698 HDGFL2Q7Z4V5 671 aaPredicted RBP19.32■□□□□ 0.68
EXTL3-211ENST00000522698 EDC4Q6P2E9 1401 aaKnown RBP19.32■□□□□ 0.68
EXTL3-211ENST00000522698 NSD3Q9BZ95 1437 aa19.32■□□□□ 0.68
EXTL3-211ENST00000522698 KTN1Q86UP2 1357 aaKnown RBP19.32■□□□□ 0.68
EXTL3-211ENST00000522698 NGDNQ8NEJ9 315 aaKnown RBP19.31■□□□□ 0.68
EXTL3-211ENST00000522698 ZNF692Q9BU19 519 aaPredicted RBP19.31■□□□□ 0.68
EXTL3-211ENST00000522698 ANKRD26Q9UPS8 1709 aa19.31■□□□□ 0.68
EXTL3-211ENST00000522698 BRD4O60885 1362 aaPredicted RBP19.3■□□□□ 0.68
EXTL3-211ENST00000522698 ALS2Q96Q42 1657 aa19.3■□□□□ 0.68
EXTL3-211ENST00000522698 USP54Q70EL1 1684 aa19.29■□□□□ 0.68
EXTL3-211ENST00000522698 PIK3C2AO00443 1686 aa19.28■□□□□ 0.68
EXTL3-211ENST00000522698 SPATA31A3Q5VYP0 1347 aa19.27■□□□□ 0.68
EXTL3-211ENST00000522698 GJD4Q96KN9 370 aaPredicted RBP19.27■□□□□ 0.68
EXTL3-211ENST00000522698 SLIT2O94813 1529 aa19.25■□□□□ 0.67
EXTL3-211ENST00000522698 GLI3P10071 1580 aa19.25■□□□□ 0.67
EXTL3-211ENST00000522698 NPC1L1Q9UHC9 1359 aa19.25■□□□□ 0.67
EXTL3-211ENST00000522698 PLEKHG5O94827 1062 aa19.25■□□□□ 0.67
EXTL3-211ENST00000522698 AMER1Q5JTC6 1135 aaPredicted RBP19.25■□□□□ 0.67
EXTL3-211ENST00000522698 TTC21BQ7Z4L5 1316 aa19.25■□□□□ 0.67
EXTL3-211ENST00000522698 SBNO1A3KN83 1393 aa19.24■□□□□ 0.67
EXTL3-211ENST00000522698 PSME1Q06323 249 aa19.24■□□□□ 0.67
EXTL3-211ENST00000522698 KRT28Q7Z3Y7 464 aa19.24■□□□□ 0.67
EXTL3-211ENST00000522698 KNSTRNQ9Y448 316 aa19.24■□□□□ 0.67
EXTL3-211ENST00000522698 TNS3Q68CZ2 1445 aa19.24■□□□□ 0.67
EXTL3-211ENST00000522698 TTC21AQ8NDW8 1320 aa19.24■□□□□ 0.67
EXTL3-211ENST00000522698 UNC5CLQ8IV45 518 aa19.22■□□□□ 0.67
EXTL3-211ENST00000522698 BLMP54132 1417 aaPredicted RBP19.22■□□□□ 0.67
EXTL3-211ENST00000522698 CGNL1Q0VF96 1302 aa19.22■□□□□ 0.67
EXTL3-211ENST00000522698 NSD2O96028 1365 aa19.21■□□□□ 0.67
EXTL3-211ENST00000522698 CABLES1Q8TDN4 633 aa19.21■□□□□ 0.67
EXTL3-211ENST00000522698 CRYBG1Q9Y4K1 1723 aa19.21■□□□□ 0.67
EXTL3-211ENST00000522698 BRWD3Q6RI45 1802 aa19.21■□□□□ 0.67
EXTL3-211ENST00000522698 HAP1P54257 671 aaPredicted RBP19.2■□□□□ 0.66
EXTL3-211ENST00000522698 USP31Q70CQ4 1352 aa19.19■□□□□ 0.66
EXTL3-211ENST00000522698 OVOS2A0A0J9YW53 1432 aa19.19■□□□□ 0.66
EXTL3-211ENST00000522698 OVOS2Q6IE36 1432 aa19.19■□□□□ 0.66
EXTL3-211ENST00000522698 FYB1O15117 783 aa19.19■□□□□ 0.66
EXTL3-211ENST00000522698 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.19■□□□□ 0.66
EXTL3-211ENST00000522698 ABCA3Q99758 1704 aa19.18■□□□□ 0.66
EXTL3-211ENST00000522698 DIEXFQ68CQ4 756 aaKnown RBP19.18■□□□□ 0.66
EXTL3-211ENST00000522698 NME9Q86XW9 330 aa19.18■□□□□ 0.66
EXTL3-211ENST00000522698 LMOD2Q6P5Q4 547 aa19.17■□□□□ 0.66
EXTL3-211ENST00000522698 PLCH1Q4KWH8 1693 aa19.17■□□□□ 0.66
EXTL3-211ENST00000522698 NWD2Q9ULI1 1742 aa19.17■□□□□ 0.66
EXTL3-211ENST00000522698 PHRF1Q9P1Y6 1649 aaKnown RBP19.16■□□□□ 0.66
EXTL3-211ENST00000522698 PAK3O75914 559 aaPredicted RBP19.15■□□□□ 0.66
EXTL3-211ENST00000522698 SF3B2Q13435 895 aaKnown RBP19.15■□□□□ 0.66
EXTL3-211ENST00000522698 GGNBP2Q9H3C7 697 aa19.15■□□□□ 0.66
EXTL3-211ENST00000522698 PARD3Q8TEW0 1356 aa19.15■□□□□ 0.66
EXTL3-211ENST00000522698 SLIT3O75094 1523 aa19.15■□□□□ 0.66
EXTL3-211ENST00000522698 CC2D1BQ5T0F9 858 aaKnown RBP19.14■□□□□ 0.65
EXTL3-211ENST00000522698 SEPT12Q8IYM1 358 aa19.14■□□□□ 0.65
EXTL3-211ENST00000522698 ARHGEF10O15013 1369 aa19.14■□□□□ 0.65
EXTL3-211ENST00000522698 VPS72Q15906 364 aa19.13■□□□□ 0.65
EXTL3-211ENST00000522698 ABTB2Q8N961 1025 aa19.13■□□□□ 0.65
EXTL3-211ENST00000522698 CCDC9Q9Y3X0 531 aaKnown RBP19.13■□□□□ 0.65
EXTL3-211ENST00000522698 LRP5O75197 1615 aa19.13■□□□□ 0.65
EXTL3-211ENST00000522698 MAP2P11137 1827 aaKnown RBP19.12■□□□□ 0.65
EXTL3-211ENST00000522698 USP19O94966 1318 aa19.11■□□□□ 0.65
EXTL3-211ENST00000522698 DEFB132Q7Z7B7 95 aa19.11■□□□□ 0.65
EXTL3-211ENST00000522698 PRKRIP1Q9H875 184 aaPredicted RBP19.11■□□□□ 0.65
EXTL3-211ENST00000522698 NFAT5O94916 1531 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms