RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 DDX54Q8TDD1 881 aaKnown RBP19.66■□□□□ 0.74
USP42-207ENST00000521713 EXOSC9Q06265 439 aaKnown RBP19.66■□□□□ 0.74
USP42-207ENST00000521713 NEUROD6Q96NK8 337 aa19.65■□□□□ 0.74
USP42-207ENST00000521713 CHMP5Q9NZZ3 219 aa19.65■□□□□ 0.74
USP42-207ENST00000521713 AMOTL2Q9Y2J4 779 aa19.65■□□□□ 0.74
USP42-207ENST00000521713 PIP4K2BP78356 416 aa19.65■□□□□ 0.74
USP42-207ENST00000521713 FAM43AQ8N2R8 423 aa19.65■□□□□ 0.74
USP42-207ENST00000521713 CT47B1P0C2W7 299 aaPredicted RBP19.65■□□□□ 0.74
USP42-207ENST00000521713 SETQ01105 290 aaPredicted RBP19.65■□□□□ 0.74
USP42-207ENST00000521713 WAPLQ7Z5K2 1190 aa19.65■□□□□ 0.74
USP42-207ENST00000521713 FCHSD2O94868 740 aa19.64■□□□□ 0.74
USP42-207ENST00000521713 CEBPAP49715 358 aaPredicted RBP19.64■□□□□ 0.74
USP42-207ENST00000521713 WDR63Q8IWG1 891 aa19.64■□□□□ 0.73
USP42-207ENST00000521713 FBXW7Q969H0 707 aa19.64■□□□□ 0.73
USP42-207ENST00000521713 CLASRPQ8N2M8 674 aaKnown RBP19.64■□□□□ 0.73
USP42-207ENST00000521713 VPS53Q5VIR6 699 aa19.63■□□□□ 0.73
USP42-207ENST00000521713 GPS2Q13227 327 aa19.63■□□□□ 0.73
USP42-207ENST00000521713 INTS3Q68E01 1043 aaKnown RBP19.63■□□□□ 0.73
USP42-207ENST00000521713 ASXL2Q76L83 1435 aa19.62■□□□□ 0.73
USP42-207ENST00000521713 KLHL34Q8N239 644 aa19.62■□□□□ 0.73
USP42-207ENST00000521713 PLCH2O75038 1416 aa19.62■□□□□ 0.73
USP42-207ENST00000521713 PANK1Q8TE04 598 aa19.62■□□□□ 0.73
USP42-207ENST00000521713 FOXD4L1Q9NU39 408 aa19.62■□□□□ 0.73
USP42-207ENST00000521713 CTDP1Q9Y5B0 961 aaPredicted RBP19.62■□□□□ 0.73
USP42-207ENST00000521713 PHF8Q9UPP1 1060 aa19.62■□□□□ 0.73
USP42-207ENST00000521713 ZC3H6P61129 1189 aaKnown RBP19.61■□□□□ 0.73
USP42-207ENST00000521713 XPCQ01831 940 aaPredicted RBP19.61■□□□□ 0.73
USP42-207ENST00000521713 ANO2Q9NQ90 1003 aa19.61■□□□□ 0.73
USP42-207ENST00000521713 RRS1Q15050 365 aaKnown RBP19.61■□□□□ 0.73
USP42-207ENST00000521713 ZNF771Q7L3S4 317 aaPredicted RBP19.61■□□□□ 0.73
USP42-207ENST00000521713 LNPKQ9C0E8 428 aa19.61■□□□□ 0.73
USP42-207ENST00000521713 NSD3Q9BZ95 1437 aa19.61■□□□□ 0.73
USP42-207ENST00000521713 CPLX1O14810 134 aa19.6■□□□□ 0.73
USP42-207ENST00000521713 GPATCH8Q9UKJ3 1502 aaKnown RBP19.6■□□□□ 0.73
USP42-207ENST00000521713 TPM2P07951 284 aa19.6■□□□□ 0.73
USP42-207ENST00000521713 TRIM29Q14134 588 aa19.6■□□□□ 0.73
USP42-207ENST00000521713 ATP10BO94823 1461 aa19.59■□□□□ 0.73
USP42-207ENST00000521713 MRE11P49959 708 aa19.59■□□□□ 0.73
USP42-207ENST00000521713 SURF6O75683 361 aaKnown RBP19.59■□□□□ 0.73
USP42-207ENST00000521713 WASLO00401 505 aaPredicted RBP19.59■□□□□ 0.73
USP42-207ENST00000521713 ERICH2A1L162 156 aa19.58■□□□□ 0.73
USP42-207ENST00000521713 SLC4A2P04920 1241 aa19.58■□□□□ 0.73
USP42-207ENST00000521713 ADGRF5Q8IZF2 1346 aa19.58■□□□□ 0.73
USP42-207ENST00000521713 PDE3AQ14432 1141 aa19.58■□□□□ 0.73
USP42-207ENST00000521713 ERC1Q8IUD2 1116 aa19.58■□□□□ 0.72
USP42-207ENST00000521713 CCT4P50991 539 aaKnown RBP19.58■□□□□ 0.72
USP42-207ENST00000521713 TNRQ92752 1358 aa19.57■□□□□ 0.72
USP42-207ENST00000521713 ZNF428Q96B54 188 aa19.57■□□□□ 0.72
USP42-207ENST00000521713 FAM135AQ9P2D6 1515 aa19.57■□□□□ 0.72
USP42-207ENST00000521713 THOC2Q8NI27 1593 aaKnown RBP19.56■□□□□ 0.72
USP42-207ENST00000521713 GNAI2P04899 355 aa19.56■□□□□ 0.72
USP42-207ENST00000521713 NFKBIBQ15653 356 aa19.56■□□□□ 0.72
USP42-207ENST00000521713 TEX35Q5T0J7 233 aa19.56■□□□□ 0.72
USP42-207ENST00000521713 CDCA7LQ96GN5 454 aa19.56■□□□□ 0.72
USP42-207ENST00000521713 WASHC4Q2M389 1173 aa19.56■□□□□ 0.72
USP42-207ENST00000521713 TBC1D2BQ9UPU7 963 aa19.56■□□□□ 0.72
USP42-207ENST00000521713 RAD21O60216 631 aa19.56■□□□□ 0.72
USP42-207ENST00000521713 FAM13BQ9NYF5 915 aa19.56■□□□□ 0.72
USP42-207ENST00000521713 LRPPRCP42704 1394 aaKnown RBP19.56■□□□□ 0.72
USP42-207ENST00000521713 DCAF8L1A6NGE4 600 aa19.56■□□□□ 0.72
USP42-207ENST00000521713 FAM177BA6PVY3 158 aa19.56■□□□□ 0.72
USP42-207ENST00000521713 NOC3LQ8WTT2 800 aaKnown RBP19.56■□□□□ 0.72
USP42-207ENST00000521713 SLC4A3P48751 1232 aa19.55■□□□□ 0.72
USP42-207ENST00000521713 RALYLQ86SE5 291 aaKnown RBP19.55■□□□□ 0.72
USP42-207ENST00000521713 SRCIN1Q9C0H9 1055 aa19.55■□□□□ 0.72
USP42-207ENST00000521713 NINLQ9Y2I6 1382 aa19.55■□□□□ 0.72
USP42-207ENST00000521713 NFE2L2Q16236 605 aa19.54■□□□□ 0.72
USP42-207ENST00000521713 C14orf93Q9H972 538 aaKnown RBP19.54■□□□□ 0.72
USP42-207ENST00000521713 RAPGEF6Q8TEU7 1601 aa19.54■□□□□ 0.72
USP42-207ENST00000521713 TPM3P06753 285 aa19.54■□□□□ 0.72
USP42-207ENST00000521713 DHX16O60231 1041 aaKnown RBP19.54■□□□□ 0.72
USP42-207ENST00000521713 TSR2Q969E8 191 aaKnown RBP19.54■□□□□ 0.72
USP42-207ENST00000521713 KDM5BQ9UGL1 1544 aa19.54■□□□□ 0.72
USP42-207ENST00000521713 CADPS2Q86UW7 1296 aa19.53■□□□□ 0.72
USP42-207ENST00000521713 CNTROBQ8N137 903 aa19.53■□□□□ 0.72
USP42-207ENST00000521713 FOXO3O43524 673 aa19.53■□□□□ 0.72
USP42-207ENST00000521713 NFXL1Q6ZNB6 911 aa19.53■□□□□ 0.72
USP42-207ENST00000521713 PKNOX2Q96KN3 472 aa19.53■□□□□ 0.72
USP42-207ENST00000521713 WDR7Q9Y4E6 1490 aa19.53■□□□□ 0.72
USP42-207ENST00000521713 BTBD11A6QL63 1104 aa19.52■□□□□ 0.72
USP42-207ENST00000521713 CCDC27Q2M243 656 aa19.52■□□□□ 0.72
USP42-207ENST00000521713 GNAT3A8MTJ3 354 aa19.52■□□□□ 0.72
USP42-207ENST00000521713 MCTP1Q6DN14 999 aa19.52■□□□□ 0.72
USP42-207ENST00000521713 NOS1P29475 1434 aa19.52■□□□□ 0.72
USP42-207ENST00000521713 CDC45O75419 566 aa19.51■□□□□ 0.71
USP42-207ENST00000521713 GOLGA6L19H0YKK7 550 aa19.51■□□□□ 0.71
USP42-207ENST00000521713 AMOTQ4VCS5 1084 aa19.51■□□□□ 0.71
USP42-207ENST00000521713 ZNF518AQ6AHZ1 1483 aa19.51■□□□□ 0.71
USP42-207ENST00000521713 GCC1Q96CN9 775 aa19.51■□□□□ 0.71
USP42-207ENST00000521713 GNL3LQ9NVN8 582 aaKnown RBP19.51■□□□□ 0.71
USP42-207ENST00000521713 FOXD4L5Q5VV16 416 aaPredicted RBP19.5■□□□□ 0.71
USP42-207ENST00000521713 FOXD4L4Q8WXT5 416 aaPredicted RBP19.5■□□□□ 0.71
USP42-207ENST00000521713 FSD1Q9BTV5 496 aa19.5■□□□□ 0.71
USP42-207ENST00000521713 CNNM1Q9NRU3 951 aa19.5■□□□□ 0.71
USP42-207ENST00000521713 TCEAL9Q9UHQ7 104 aa19.5■□□□□ 0.71
USP42-207ENST00000521713 HIP1O00291 1037 aa19.5■□□□□ 0.71
USP42-207ENST00000521713 NUCB2P80303 420 aa19.5■□□□□ 0.71
USP42-207ENST00000521713 NOB1Q9ULX3 412 aaKnown RBP19.5■□□□□ 0.71
USP42-207ENST00000521713 A2MP01023 1474 aa19.49■□□□□ 0.71
USP42-207ENST00000521713 SCAF11Q99590 1463 aaKnown RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms