RNA–Protein interactions for RNA: ENST00000521550.5

SPIDR-214, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,849 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-214ENST00000521550 CARD14Q9BXL6 1004 aa18.51■□□□□ 0.55
SPIDR-214ENST00000521550 CGNL1Q0VF96 1302 aa18.51■□□□□ 0.55
SPIDR-214ENST00000521550 ARHGEF28Q8N1W1 1705 aaKnown RBP18.51■□□□□ 0.55
SPIDR-214ENST00000521550 DDX17Q92841 729 aaKnown RBP18.51■□□□□ 0.55
SPIDR-214ENST00000521550 LRRC59Q96AG4 307 aaKnown RBP18.51■□□□□ 0.55
SPIDR-214ENST00000521550 CDC42BPGQ6DT37 1551 aa18.51■□□□□ 0.55
SPIDR-214ENST00000521550 NSD3Q9BZ95 1437 aa18.5■□□□□ 0.55
SPIDR-214ENST00000521550 NSD2O96028 1365 aa18.5■□□□□ 0.55
SPIDR-214ENST00000521550 LRP6O75581 1613 aa18.49■□□□□ 0.55
SPIDR-214ENST00000521550 USP32Q8NFA0 1604 aa18.49■□□□□ 0.55
SPIDR-214ENST00000521550 ORAI2Q96SN7 254 aa18.49■□□□□ 0.55
SPIDR-214ENST00000521550 RBM19Q9Y4C8 960 aaKnown RBP18.49■□□□□ 0.55
SPIDR-214ENST00000521550 POLR3AO14802 1390 aaPredicted RBP18.49■□□□□ 0.55
SPIDR-214ENST00000521550 MEX3CQ5U5Q3 659 aaKnown RBP18.49■□□□□ 0.55
SPIDR-214ENST00000521550 GOLGA2Q08379 1002 aa18.47■□□□□ 0.55
SPIDR-214ENST00000521550 POTEAQ6S8J7 498 aa18.47■□□□□ 0.55
SPIDR-214ENST00000521550 CFAP53Q96M91 514 aa18.47■□□□□ 0.55
SPIDR-214ENST00000521550 SLC12A5Q9H2X9 1139 aa18.47■□□□□ 0.55
SPIDR-214ENST00000521550 ANKRD36BQ8N2N9 1353 aa18.47■□□□□ 0.55
SPIDR-214ENST00000521550 PLEKHH1Q9ULM0 1364 aa18.47■□□□□ 0.55
SPIDR-214ENST00000521550 NUTM2BA6NNL0 878 aaPredicted RBP18.46■□□□□ 0.55
SPIDR-214ENST00000521550 NUTM2EB1AL46 878 aaPredicted RBP18.46■□□□□ 0.55
SPIDR-214ENST00000521550 NUTM2AQ8IVF1 878 aaPredicted RBP18.46■□□□□ 0.55
SPIDR-214ENST00000521550 SIRT1Q96EB6 747 aa18.46■□□□□ 0.55
SPIDR-214ENST00000521550 POGKQ9P215 609 aa18.46■□□□□ 0.55
SPIDR-214ENST00000521550 ESCO1Q5FWF5 840 aa18.45■□□□□ 0.54
SPIDR-214ENST00000521550 CDCA7LQ96GN5 454 aa18.45■□□□□ 0.54
SPIDR-214ENST00000521550 ATAD2Q6PL18 1390 aa18.45■□□□□ 0.54
SPIDR-214ENST00000521550 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.44■□□□□ 0.54
SPIDR-214ENST00000521550 SOS2Q07890 1332 aaPredicted RBP18.43■□□□□ 0.54
SPIDR-214ENST00000521550 NUTM2FA1L443 756 aa18.43■□□□□ 0.54
SPIDR-214ENST00000521550 SRPK2P78362 688 aaKnown RBP18.43■□□□□ 0.54
SPIDR-214ENST00000521550 PNPLA6Q8IY17 1366 aa18.42■□□□□ 0.54
SPIDR-214ENST00000521550 MYT1Q01538 1121 aa18.42■□□□□ 0.54
SPIDR-214ENST00000521550 TERF2IPQ9NYB0 399 aa18.42■□□□□ 0.54
SPIDR-214ENST00000521550 TULP4Q9NRJ4 1543 aa18.42■□□□□ 0.54
SPIDR-214ENST00000521550 FMN2Q9NZ56 1722 aa18.42■□□□□ 0.54
SPIDR-214ENST00000521550 NPHP3Q7Z494 1330 aa18.41■□□□□ 0.54
SPIDR-214ENST00000521550 ZNF772Q68DY9 489 aaPredicted RBP18.41■□□□□ 0.54
SPIDR-214ENST00000521550 PRAM1Q96QH2 718 aa18.4■□□□□ 0.54
SPIDR-214ENST00000521550 ZNF521Q96K83 1311 aa18.4■□□□□ 0.54
SPIDR-214ENST00000521550 DLC1Q96QB1 1528 aa18.39■□□□□ 0.54
SPIDR-214ENST00000521550 FOXO3O43524 673 aa18.39■□□□□ 0.53
SPIDR-214ENST00000521550 SAFB2Q14151 953 aaKnown RBP eCLIP18.39■□□□□ 0.532e-6■■■■□ 22
SPIDR-214ENST00000521550 CABP2Q9NPB3 220 aa18.39■□□□□ 0.53
SPIDR-214ENST00000521550 RGPD8O14715 1765 aaPredicted RBP18.38■□□□□ 0.53
SPIDR-214ENST00000521550 E9PSI1 815 aa18.38■□□□□ 0.53
SPIDR-214ENST00000521550 APAF1O14727 1248 aa18.37■□□□□ 0.53
SPIDR-214ENST00000521550 SLFN5Q08AF3 891 aa18.37■□□□□ 0.53
SPIDR-214ENST00000521550 DUSP27Q5VZP5 1158 aa18.37■□□□□ 0.53
SPIDR-214ENST00000521550 HDGFL2Q7Z4V5 671 aaPredicted RBP18.37■□□□□ 0.53
SPIDR-214ENST00000521550 CCDC146Q8IYE0 955 aa18.37■□□□□ 0.53
SPIDR-214ENST00000521550 KIF1AQ12756 1690 aa18.36■□□□□ 0.53
SPIDR-214ENST00000521550 RUNDC1Q96C34 613 aa18.35■□□□□ 0.53
SPIDR-214ENST00000521550 PXDNQ92626 1479 aa18.35■□□□□ 0.53
SPIDR-214ENST00000521550 AFF2P51816 1311 aa18.35■□□□□ 0.53
SPIDR-214ENST00000521550 MINK1Q8N4C8 1332 aaPredicted RBP18.35■□□□□ 0.53
SPIDR-214ENST00000521550 XPCQ01831 940 aaPredicted RBP18.35■□□□□ 0.53
SPIDR-214ENST00000521550 EXOC6Q8TAG9 804 aa18.35■□□□□ 0.53
SPIDR-214ENST00000521550 C8orf37Q96NL8 207 aa18.35■□□□□ 0.53
SPIDR-214ENST00000521550 FANCIQ9NVI1 1328 aa18.34■□□□□ 0.53
SPIDR-214ENST00000521550 NCBP3Q53F19 620 aaKnown RBP18.34■□□□□ 0.53
SPIDR-214ENST00000521550 COL22A1Q8NFW1 1626 aaPredicted RBP18.34■□□□□ 0.53
SPIDR-214ENST00000521550 ADAMTS2O95450 1211 aa18.33■□□□□ 0.53
SPIDR-214ENST00000521550 TNNT2P45379 298 aaPredicted RBP18.33■□□□□ 0.53
SPIDR-214ENST00000521550 MTHFSP49914 203 aa18.33■□□□□ 0.52
SPIDR-214ENST00000521550 ADGRB2O60241 1585 aa18.32■□□□□ 0.52
SPIDR-214ENST00000521550 TRMT2AQ8IZ69 625 aaKnown RBP18.32■□□□□ 0.52
SPIDR-214ENST00000521550 PHF8Q9UPP1 1060 aa18.31■□□□□ 0.52
SPIDR-214ENST00000521550 A0A1W2PP64 1363 aa18.31■□□□□ 0.52
SPIDR-214ENST00000521550 NGLY1Q96IV0 654 aa18.3■□□□□ 0.52
SPIDR-214ENST00000521550 CDK19Q9BWU1 502 aa18.3■□□□□ 0.52
SPIDR-214ENST00000521550 RXRBP28702 533 aa18.3■□□□□ 0.52
SPIDR-214ENST00000521550 KRT28Q7Z3Y7 464 aa18.28■□□□□ 0.52
SPIDR-214ENST00000521550 PNNQ9H307 717 aaKnown RBP18.28■□□□□ 0.52
SPIDR-214ENST00000521550 ANKARQ7Z5J8 1434 aa18.28■□□□□ 0.52
SPIDR-214ENST00000521550 SPATA31A3Q5VYP0 1347 aa18.27■□□□□ 0.51
SPIDR-214ENST00000521550 MARF1Q9Y4F3 1742 aaKnown RBP18.26■□□□□ 0.51
SPIDR-214ENST00000521550 TCERG1O14776 1098 aaKnown RBP18.26■□□□□ 0.51
SPIDR-214ENST00000521550 PSME1Q06323 249 aa18.26■□□□□ 0.51
SPIDR-214ENST00000521550 CCDC27Q2M243 656 aa18.26■□□□□ 0.51
SPIDR-214ENST00000521550 WDR63Q8IWG1 891 aa18.26■□□□□ 0.51
SPIDR-214ENST00000521550 QTRT2Q9H974 415 aaKnown RBP18.26■□□□□ 0.51
SPIDR-214ENST00000521550 PLIN1O60240 522 aa18.26■□□□□ 0.51
SPIDR-214ENST00000521550 WWC1Q8IX03 1113 aa18.26■□□□□ 0.51
SPIDR-214ENST00000521550 CRBNQ96SW2 442 aa18.26■□□□□ 0.51
SPIDR-214ENST00000521550 ANKRD26Q9UPS8 1709 aa18.25■□□□□ 0.51
SPIDR-214ENST00000521550 WASLO00401 505 aaPredicted RBP18.25■□□□□ 0.51
SPIDR-214ENST00000521550 PMFBP1Q8TBY8 1022 aa18.25■□□□□ 0.51
SPIDR-214ENST00000521550 ATP7BP35670 1465 aa18.24■□□□□ 0.51
SPIDR-214ENST00000521550 U2AF1L5P0DN76 240 aaPredicted RBP18.24■□□□□ 0.51
SPIDR-214ENST00000521550 U2AF1Q01081 240 aaKnown RBP eCLIP18.24■□□□□ 0.51
SPIDR-214ENST00000521550 TCP11L2Q8N4U5 519 aa18.24■□□□□ 0.51
SPIDR-214ENST00000521550 USP21Q9UK80 565 aa18.23■□□□□ 0.51
SPIDR-214ENST00000521550 CDK12Q9NYV4 1490 aaPredicted RBP18.23■□□□□ 0.51
SPIDR-214ENST00000521550 TNS3Q68CZ2 1445 aa18.23■□□□□ 0.51
SPIDR-214ENST00000521550 RBM6P78332 1123 aaKnown RBP18.23■□□□□ 0.51
SPIDR-214ENST00000521550 FNBP4Q8N3X1 1017 aaPredicted RBP18.23■□□□□ 0.51
SPIDR-214ENST00000521550 CABP1Q9NZU7 370 aa18.23■□□□□ 0.51
SPIDR-214ENST00000521550 FYB1O15117 783 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms