RNA–Protein interactions for RNA: ENST00000521047.1

CLINT1-203, Transcript of clathrin interactor 1, humanhuman

TSL 2

Gene CLINT1, Length 733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-203ENST00000521047 BCL9LQ86UU0 1499 aa11.38□□□□□ -0.59
CLINT1-203ENST00000521047 ITSN1Q15811 1721 aa11.38□□□□□ -0.59
CLINT1-203ENST00000521047 TNS3Q68CZ2 1445 aa11.38□□□□□ -0.59
CLINT1-203ENST00000521047 WASLO00401 505 aaPredicted RBP11.38□□□□□ -0.59
CLINT1-203ENST00000521047 POGKQ9P215 609 aa11.38□□□□□ -0.59
CLINT1-203ENST00000521047 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.38□□□□□ -0.59
CLINT1-203ENST00000521047 NBPF8Q3BBV2 869 aa11.37□□□□□ -0.59
CLINT1-203ENST00000521047 KRT28Q7Z3Y7 464 aa11.37□□□□□ -0.59
CLINT1-203ENST00000521047 C8orf37Q96NL8 207 aa11.37□□□□□ -0.59
CLINT1-203ENST00000521047 FBXO3Q9UK99 471 aa11.37□□□□□ -0.59
CLINT1-203ENST00000521047 SBNO1A3KN83 1393 aa11.37□□□□□ -0.59
CLINT1-203ENST00000521047 ADAMTS2O95450 1211 aa11.36□□□□□ -0.59
CLINT1-203ENST00000521047 MEX3CQ5U5Q3 659 aaKnown RBP11.36□□□□□ -0.59
CLINT1-203ENST00000521047 ZNF772Q68DY9 489 aaPredicted RBP11.36□□□□□ -0.59
CLINT1-203ENST00000521047 FNBP4Q8N3X1 1017 aaPredicted RBP11.36□□□□□ -0.59
CLINT1-203ENST00000521047 SPDYE1Q8NFV5 336 aaPredicted RBP11.36□□□□□ -0.59
CLINT1-203ENST00000521047 PMFBP1Q8TBY8 1022 aa11.36□□□□□ -0.59
CLINT1-203ENST00000521047 CDK12Q9NYV4 1490 aaPredicted RBP11.36□□□□□ -0.59
CLINT1-203ENST00000521047 PLCH1Q4KWH8 1693 aa11.36□□□□□ -0.59
CLINT1-203ENST00000521047 RGS12O14924 1447 aa11.35□□□□□ -0.59
CLINT1-203ENST00000521047 ATRNO75882 1429 aa11.35□□□□□ -0.59
CLINT1-203ENST00000521047 SLIT2O94813 1529 aa11.35□□□□□ -0.59
CLINT1-203ENST00000521047 NRAPQ86VF7 1730 aa11.35□□□□□ -0.59
CLINT1-203ENST00000521047 GLI3P10071 1580 aa11.34□□□□□ -0.59
CLINT1-203ENST00000521047 POLR3AO14802 1390 aaPredicted RBP11.33□□□□□ -0.6
CLINT1-203ENST00000521047 GPRASP1Q5JY77 1395 aa11.33□□□□□ -0.6
CLINT1-203ENST00000521047 NEUROD1Q13562 356 aa11.33□□□□□ -0.6
CLINT1-203ENST00000521047 CCER1Q8TC90 406 aaPredicted RBP11.33□□□□□ -0.6
CLINT1-203ENST00000521047 CABLES1Q8TDN4 633 aa11.33□□□□□ -0.6
CLINT1-203ENST00000521047 CDK19Q9BWU1 502 aa11.33□□□□□ -0.6
CLINT1-203ENST00000521047 PHRF1Q9P1Y6 1649 aaKnown RBP11.33□□□□□ -0.6
CLINT1-203ENST00000521047 NWD2Q9ULI1 1742 aa11.32□□□□□ -0.6
CLINT1-203ENST00000521047 PITPNM1O00562 1244 aa11.32□□□□□ -0.6
CLINT1-203ENST00000521047 NUDT16Q96DE0 195 aaKnown RBP11.32□□□□□ -0.6
CLINT1-203ENST00000521047 EIF3AQ14152 1382 aaKnown RBP11.31□□□□□ -0.6
CLINT1-203ENST00000521047 NGLY1Q96IV0 654 aa11.31□□□□□ -0.6
CLINT1-203ENST00000521047 QTRT2Q9H974 415 aaKnown RBP11.31□□□□□ -0.6
CLINT1-203ENST00000521047 CENPJQ9HC77 1338 aaPredicted RBP11.31□□□□□ -0.6
CLINT1-203ENST00000521047 RXRBP28702 533 aa11.3□□□□□ -0.6
CLINT1-203ENST00000521047 USP21Q9UK80 565 aa11.3□□□□□ -0.6
CLINT1-203ENST00000521047 CLEC11AQ9Y240 323 aa11.3□□□□□ -0.6
CLINT1-203ENST00000521047 RALGAPBQ86X10 1494 aa11.3□□□□□ -0.6
CLINT1-203ENST00000521047 PLEKHG3A1L390 1219 aa11.29□□□□□ -0.6
CLINT1-203ENST00000521047 RBM6P78332 1123 aaKnown RBP11.29□□□□□ -0.6
CLINT1-203ENST00000521047 PSME1Q06323 249 aa11.29□□□□□ -0.6
CLINT1-203ENST00000521047 BRWD3Q6RI45 1802 aa11.29□□□□□ -0.6
CLINT1-203ENST00000521047 ARHGEF10O15013 1369 aa11.28□□□□□ -0.6
CLINT1-203ENST00000521047 AKAP12Q02952 1782 aa11.28□□□□□ -0.6
CLINT1-203ENST00000521047 SSH2Q76I76 1423 aa11.28□□□□□ -0.6
CLINT1-203ENST00000521047 ACEP12821 1306 aa11.28□□□□□ -0.6
CLINT1-203ENST00000521047 COL14A1Q05707 1796 aaKnown RBP11.28□□□□□ -0.6
CLINT1-203ENST00000521047 NRKQ7Z2Y5 1582 aa11.28□□□□□ -0.6
CLINT1-203ENST00000521047 FAM83GA6ND36 823 aa11.27□□□□□ -0.61
CLINT1-203ENST00000521047 UPF1Q92900 1129 aaKnown RBP eCLIP11.27□□□□□ -0.614e-9■□□□□ 8.2
CLINT1-203ENST00000521047 CABP2Q9NPB3 220 aa11.27□□□□□ -0.61
CLINT1-203ENST00000521047 CCDC61Q9Y6R9 512 aa11.27□□□□□ -0.61
CLINT1-203ENST00000521047 ROCK2O75116 1388 aaKnown RBP11.27□□□□□ -0.61
CLINT1-203ENST00000521047 PIK3C2AO00443 1686 aa11.27□□□□□ -0.61
CLINT1-203ENST00000521047 PPIP5K1Q6PFW1 1433 aa11.26□□□□□ -0.61
CLINT1-203ENST00000521047 TRPC5Q9UL62 973 aaPredicted RBP11.26□□□□□ -0.61
CLINT1-203ENST00000521047 CLSPNQ9HAW4 1339 aa11.26□□□□□ -0.61
CLINT1-203ENST00000521047 LMO7Q8WWI1 1683 aa11.26□□□□□ -0.61
CLINT1-203ENST00000521047 UNC5CLQ8IV45 518 aa11.25□□□□□ -0.61
CLINT1-203ENST00000521047 SBNO2Q9Y2G9 1366 aa11.25□□□□□ -0.61
CLINT1-203ENST00000521047 CD163L1Q9NR16 1453 aa11.25□□□□□ -0.61
CLINT1-203ENST00000521047 MON2Q7Z3U7 1717 aa11.24□□□□□ -0.61
CLINT1-203ENST00000521047 PLEKHG5O94827 1062 aa11.24□□□□□ -0.61
CLINT1-203ENST00000521047 NGDNQ8NEJ9 315 aaKnown RBP11.24□□□□□ -0.61
CLINT1-203ENST00000521047 GJD4Q96KN9 370 aaPredicted RBP11.24□□□□□ -0.61
CLINT1-203ENST00000521047 USP6P35125 1406 aa11.24□□□□□ -0.61
CLINT1-203ENST00000521047 EP400Q96L91 3159 aa11.23□□□□□ -0.61
CLINT1-203ENST00000521047 VASPP50552 380 aaPredicted RBP11.23□□□□□ -0.61
CLINT1-203ENST00000521047 LMOD2Q6P5Q4 547 aa11.23□□□□□ -0.61
CLINT1-203ENST00000521047 USP19O94966 1318 aa11.23□□□□□ -0.61
CLINT1-203ENST00000521047 CPSF1Q10570 1443 aaKnown RBP11.23□□□□□ -0.61
CLINT1-203ENST00000521047 SLIT3O75094 1523 aa11.23□□□□□ -0.61
CLINT1-203ENST00000521047 COL18A1P39060 1754 aa11.23□□□□□ -0.61
CLINT1-203ENST00000521047 VPS72Q15906 364 aa11.22□□□□□ -0.61
CLINT1-203ENST00000521047 TONSLQ96HA7 1378 aa11.22□□□□□ -0.61
CLINT1-203ENST00000521047 CABP1Q9NZU7 370 aa11.22□□□□□ -0.61
CLINT1-203ENST00000521047 THSD7AQ9UPZ6 1657 aa11.22□□□□□ -0.61
CLINT1-203ENST00000521047 USP54Q70EL1 1684 aa11.21□□□□□ -0.61
CLINT1-203ENST00000521047 CAMTA1Q9Y6Y1 1673 aa11.21□□□□□ -0.61
CLINT1-203ENST00000521047 ONECUT3O60422 494 aaPredicted RBP11.21□□□□□ -0.61
CLINT1-203ENST00000521047 PRR29P0C7W0 189 aa11.21□□□□□ -0.61
CLINT1-203ENST00000521047 SRPK2P78362 688 aaKnown RBP11.21□□□□□ -0.61
CLINT1-203ENST00000521047 NUTM2GQ5VZR2 741 aa11.21□□□□□ -0.61
CLINT1-203ENST00000521047 KIAA0232Q92628 1395 aa11.2□□□□□ -0.62
CLINT1-203ENST00000521047 PAK3O75914 559 aaPredicted RBP11.2□□□□□ -0.62
CLINT1-203ENST00000521047 TESK2Q96S53 571 aa11.2□□□□□ -0.62
CLINT1-203ENST00000521047 EVC2Q86UK5 1308 aa11.19□□□□□ -0.62
CLINT1-203ENST00000521047 CPDO75976 1380 aa11.18□□□□□ -0.62
CLINT1-203ENST00000521047 CHRNA2Q15822 529 aa11.18□□□□□ -0.62
CLINT1-203ENST00000521047 CHRDL2Q6WN34 429 aa11.18□□□□□ -0.62
CLINT1-203ENST00000521047 CARD11Q9BXL7 1154 aa11.18□□□□□ -0.62
CLINT1-203ENST00000521047 BTG4Q9NY30 223 aa11.18□□□□□ -0.62
CLINT1-203ENST00000521047 RGPD5Q99666 1765 aa11.18□□□□□ -0.62
CLINT1-203ENST00000521047 BRD4O60885 1362 aaPredicted RBP11.17□□□□□ -0.62
CLINT1-203ENST00000521047 NFAT5O94916 1531 aa11.17□□□□□ -0.62
CLINT1-203ENST00000521047 SPATA31A5Q5VU36 1347 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms