RNA–Protein interactions for RNA: ENST00000520963.2

IGHV7-40-201, Transcript of immunoglobulin heavy variable 7-40 (pseudogene), humanhuman

BASIC

Gene IGHV7-40, Length 296 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV7-40-201ENST00000520963 USP31Q70CQ4 1352 aa10.81□□□□□ -0.68
IGHV7-40-201ENST00000520963 ESCO1Q5FWF5 840 aa10.81□□□□□ -0.68
IGHV7-40-201ENST00000520963 NGDNQ8NEJ9 315 aaKnown RBP10.81□□□□□ -0.68
IGHV7-40-201ENST00000520963 PMFBP1Q8TBY8 1022 aa10.81□□□□□ -0.68
IGHV7-40-201ENST00000520963 ORAI2Q96SN7 254 aa10.81□□□□□ -0.68
IGHV7-40-201ENST00000520963 SLAIN2Q9P270 581 aa10.8□□□□□ -0.68
IGHV7-40-201ENST00000520963 MYBBP1AQ9BQG0 1328 aaKnown RBP10.8□□□□□ -0.68
IGHV7-40-201ENST00000520963 OVOS2A0A0J9YW53 1432 aa10.79□□□□□ -0.68
IGHV7-40-201ENST00000520963 OVOS2Q6IE36 1432 aa10.79□□□□□ -0.68
IGHV7-40-201ENST00000520963 CC2D1BQ5T0F9 858 aaKnown RBP10.79□□□□□ -0.68
IGHV7-40-201ENST00000520963 USP54Q70EL1 1684 aa10.79□□□□□ -0.68
IGHV7-40-201ENST00000520963 BRINP3Q76B58 766 aa10.78□□□□□ -0.68
IGHV7-40-201ENST00000520963 NLRP13Q86W25 1043 aa10.78□□□□□ -0.68
IGHV7-40-201ENST00000520963 NPHP3Q7Z494 1330 aa10.78□□□□□ -0.68
IGHV7-40-201ENST00000520963 ANKRD26Q9UPS8 1709 aa10.78□□□□□ -0.68
IGHV7-40-201ENST00000520963 SBNO1A3KN83 1393 aa10.77□□□□□ -0.68
IGHV7-40-201ENST00000520963 AATKQ6ZMQ8 1374 aa10.77□□□□□ -0.68
IGHV7-40-201ENST00000520963 PPP2R1AP30153 589 aa10.77□□□□□ -0.69
IGHV7-40-201ENST00000520963 NME9Q86XW9 330 aa10.77□□□□□ -0.69
IGHV7-40-201ENST00000520963 SOS2Q07890 1332 aaPredicted RBP10.77□□□□□ -0.69
IGHV7-40-201ENST00000520963 KIF20BQ96Q89 1820 aa10.77□□□□□ -0.69
IGHV7-40-201ENST00000520963 PXDNQ92626 1479 aa10.76□□□□□ -0.69
IGHV7-40-201ENST00000520963 TRPM3Q9HCF6 1732 aaPredicted RBP10.76□□□□□ -0.69
IGHV7-40-201ENST00000520963 FOXO3O43524 673 aa10.76□□□□□ -0.69
IGHV7-40-201ENST00000520963 PSME1Q06323 249 aa10.76□□□□□ -0.69
IGHV7-40-201ENST00000520963 MORC1Q86VD1 984 aa10.76□□□□□ -0.69
IGHV7-40-201ENST00000520963 GGNBP2Q9H3C7 697 aa10.76□□□□□ -0.69
IGHV7-40-201ENST00000520963 KRT28Q7Z3Y7 464 aa10.75□□□□□ -0.69
IGHV7-40-201ENST00000520963 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.75□□□□□ -0.69
IGHV7-40-201ENST00000520963 COG3Q96JB2 828 aa10.75□□□□□ -0.69
IGHV7-40-201ENST00000520963 INSRP06213 1382 aa10.75□□□□□ -0.69
IGHV7-40-201ENST00000520963 SMG6Q86US8 1419 aaKnown RBP10.75□□□□□ -0.69
IGHV7-40-201ENST00000520963 PIK3C2AO00443 1686 aa10.74□□□□□ -0.69
IGHV7-40-201ENST00000520963 NHSL1Q5SYE7 1610 aa10.73□□□□□ -0.69
IGHV7-40-201ENST00000520963 TOM1O60784 492 aa10.73□□□□□ -0.69
IGHV7-40-201ENST00000520963 CERKQ8TCT0 537 aa10.73□□□□□ -0.69
IGHV7-40-201ENST00000520963 USP19O94966 1318 aa10.73□□□□□ -0.69
IGHV7-40-201ENST00000520963 PNPLA6Q8IY17 1366 aa10.73□□□□□ -0.69
IGHV7-40-201ENST00000520963 AHDC1Q5TGY3 1603 aaPredicted RBP10.73□□□□□ -0.69
IGHV7-40-201ENST00000520963 ALS2Q96Q42 1657 aa10.73□□□□□ -0.69
IGHV7-40-201ENST00000520963 CCDC184Q52MB2 194 aa10.72□□□□□ -0.69
IGHV7-40-201ENST00000520963 ABTB2Q8N961 1025 aa10.72□□□□□ -0.69
IGHV7-40-201ENST00000520963 ZRANB1Q9UGI0 708 aa10.72□□□□□ -0.69
IGHV7-40-201ENST00000520963 SPATA31A3Q5VYP0 1347 aa10.72□□□□□ -0.69
IGHV7-40-201ENST00000520963 KIF24Q5T7B8 1368 aa10.72□□□□□ -0.69
IGHV7-40-201ENST00000520963 TNS3Q68CZ2 1445 aa10.72□□□□□ -0.69
IGHV7-40-201ENST00000520963 MARF1Q9Y4F3 1742 aaKnown RBP10.72□□□□□ -0.69
IGHV7-40-201ENST00000520963 ARHGEF10O15013 1369 aa10.71□□□□□ -0.69
IGHV7-40-201ENST00000520963 SLIT3O75094 1523 aa10.71□□□□□ -0.69
IGHV7-40-201ENST00000520963 MED1Q15648 1581 aaPredicted RBP10.71□□□□□ -0.69
IGHV7-40-201ENST00000520963 PNISRQ8TF01 805 aaKnown RBP10.71□□□□□ -0.69
IGHV7-40-201ENST00000520963 MRS2Q9HD23 443 aa10.71□□□□□ -0.69
IGHV7-40-201ENST00000520963 NLRP6P59044 892 aa10.7□□□□□ -0.7
IGHV7-40-201ENST00000520963 POLKQ9UBT6 870 aa10.7□□□□□ -0.7
IGHV7-40-201ENST00000520963 ROBO1Q9Y6N7 1651 aa10.69□□□□□ -0.7
IGHV7-40-201ENST00000520963 CDK12Q9NYV4 1490 aaPredicted RBP10.69□□□□□ -0.7
IGHV7-40-201ENST00000520963 PAK3O75914 559 aaPredicted RBP10.69□□□□□ -0.7
IGHV7-40-201ENST00000520963 MTHFSP49914 203 aa10.69□□□□□ -0.7
IGHV7-40-201ENST00000520963 KCNH5Q8NCM2 988 aa10.69□□□□□ -0.7
IGHV7-40-201ENST00000520963 SUPT16HQ9Y5B9 1047 aaKnown RBP10.69□□□□□ -0.7
IGHV7-40-201ENST00000520963 NFAT5O94916 1531 aa10.68□□□□□ -0.7
IGHV7-40-201ENST00000520963 COL3A1P02461 1466 aaPredicted RBP10.68□□□□□ -0.7
IGHV7-40-201ENST00000520963 XPCQ01831 940 aaPredicted RBP10.68□□□□□ -0.7
IGHV7-40-201ENST00000520963 CNGB1Q14028 1251 aaPredicted RBP10.68□□□□□ -0.7
IGHV7-40-201ENST00000520963 DDX17Q92841 729 aaKnown RBP10.68□□□□□ -0.7
IGHV7-40-201ENST00000520963 PHRF1Q9P1Y6 1649 aaKnown RBP10.67□□□□□ -0.7
IGHV7-40-201ENST00000520963 RTL1A6NKG5 1358 aa10.66□□□□□ -0.7
IGHV7-40-201ENST00000520963 UBAP1LF5GYI3 381 aa10.66□□□□□ -0.7
IGHV7-40-201ENST00000520963 GCP02774 474 aa10.66□□□□□ -0.7
IGHV7-40-201ENST00000520963 TNNT2P45379 298 aaPredicted RBP10.66□□□□□ -0.7
IGHV7-40-201ENST00000520963 LRRC59Q96AG4 307 aaKnown RBP10.66□□□□□ -0.7
IGHV7-40-201ENST00000520963 CFAP53Q96M91 514 aa10.66□□□□□ -0.7
IGHV7-40-201ENST00000520963 CPDO75976 1380 aa10.65□□□□□ -0.7
IGHV7-40-201ENST00000520963 MAP3K19Q56UN5 1328 aa10.65□□□□□ -0.7
IGHV7-40-201ENST00000520963 ABCC6O95255 1503 aa10.65□□□□□ -0.7
IGHV7-40-201ENST00000520963 CRYBG1Q9Y4K1 1723 aa10.65□□□□□ -0.7
IGHV7-40-201ENST00000520963 ARHGEF25Q86VW2 580 aa10.65□□□□□ -0.7
IGHV7-40-201ENST00000520963 EMILIN1Q9Y6C2 1016 aa10.65□□□□□ -0.7
IGHV7-40-201ENST00000520963 COL16A1Q07092 1604 aaPredicted RBP10.65□□□□□ -0.7
IGHV7-40-201ENST00000520963 FLT4P35916 1363 aa10.65□□□□□ -0.71
IGHV7-40-201ENST00000520963 FBLN1P23142 703 aa10.64□□□□□ -0.71
IGHV7-40-201ENST00000520963 RRS1Q15050 365 aaKnown RBP10.64□□□□□ -0.71
IGHV7-40-201ENST00000520963 NUTM2GQ5VZR2 741 aa10.64□□□□□ -0.71
IGHV7-40-201ENST00000520963 COL22A1Q8NFW1 1626 aaPredicted RBP10.64□□□□□ -0.71
IGHV7-40-201ENST00000520963 MAP2P11137 1827 aaKnown RBP10.63□□□□□ -0.71
IGHV7-40-201ENST00000520963 IP6K1Q92551 441 aa10.63□□□□□ -0.71
IGHV7-40-201ENST00000520963 PEAK1Q9H792 1746 aa10.63□□□□□ -0.71
IGHV7-40-201ENST00000520963 SHPRHQ149N8 1683 aa10.63□□□□□ -0.71
IGHV7-40-201ENST00000520963 BLMP54132 1417 aaPredicted RBP10.62□□□□□ -0.71
IGHV7-40-201ENST00000520963 DIAPH1O60610 1272 aaKnown RBP10.62□□□□□ -0.71
IGHV7-40-201ENST00000520963 HOXC9P31274 260 aa10.62□□□□□ -0.71
IGHV7-40-201ENST00000520963 IL13P35225 146 aa10.62□□□□□ -0.71
IGHV7-40-201ENST00000520963 NUDCQ9Y266 331 aa10.62□□□□□ -0.71
IGHV7-40-201ENST00000520963 LMOD2Q6P5Q4 547 aa10.61□□□□□ -0.71
IGHV7-40-201ENST00000520963 ADAMTS8Q9UP79 889 aa10.61□□□□□ -0.71
IGHV7-40-201ENST00000520963 AMPHP49418 695 aa10.6□□□□□ -0.71
IGHV7-40-201ENST00000520963 WDR43Q15061 677 aaKnown RBP eCLIP10.6□□□□□ -0.71
IGHV7-40-201ENST00000520963 NCBP3Q53F19 620 aaKnown RBP10.6□□□□□ -0.71
IGHV7-40-201ENST00000520963 HSP90AB2PQ58FF8 381 aa10.6□□□□□ -0.71
IGHV7-40-201ENST00000520963 FAM9BQ8IZU0 186 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms