RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 MYOM2P54296 1465 aa12.8□□□□□ -0.36
MCF2-209ENST00000520602 ATF7IPQ6VMQ6 1270 aa12.8□□□□□ -0.36
MCF2-209ENST00000520602 PUS7Q96PZ0 661 aaKnown RBP12.8□□□□□ -0.36
MCF2-209ENST00000520602 LNPKQ9C0E8 428 aa12.8□□□□□ -0.36
MCF2-209ENST00000520602 MVPQ14764 893 aaKnown RBP12.79□□□□□ -0.36
MCF2-209ENST00000520602 ZMYM3Q14202 1370 aa12.79□□□□□ -0.36
MCF2-209ENST00000520602 SBNO2Q9Y2G9 1366 aa12.79□□□□□ -0.36
MCF2-209ENST00000520602 C1orf115Q9H7X2 142 aa12.79□□□□□ -0.36
MCF2-209ENST00000520602 AMOTL2Q9Y2J4 779 aa12.79□□□□□ -0.36
MCF2-209ENST00000520602 SPHKAPQ2M3C7 1700 aa12.78□□□□□ -0.36
MCF2-209ENST00000520602 NFE2L2Q16236 605 aa12.78□□□□□ -0.36
MCF2-209ENST00000520602 TWISTNBQ3B726 338 aaPredicted RBP12.78□□□□□ -0.36
MCF2-209ENST00000520602 STK31Q9BXU1 1019 aa12.78□□□□□ -0.36
MCF2-209ENST00000520602 ZMYM4Q5VZL5 1548 aa12.78□□□□□ -0.36
MCF2-209ENST00000520602 POLKQ9UBT6 870 aa12.78□□□□□ -0.36
MCF2-209ENST00000520602 TNRQ92752 1358 aa12.78□□□□□ -0.36
MCF2-209ENST00000520602 HECW2Q9P2P5 1572 aa12.77□□□□□ -0.36
MCF2-209ENST00000520602 MADDQ8WXG6 1647 aa12.77□□□□□ -0.36
MCF2-209ENST00000520602 ABTB2Q8N961 1025 aa12.77□□□□□ -0.36
MCF2-209ENST00000520602 NINLQ9Y2I6 1382 aa12.77□□□□□ -0.37
MCF2-209ENST00000520602 KIF1BO60333 1816 aa12.77□□□□□ -0.37
MCF2-209ENST00000520602 ABCC3O15438 1527 aa12.76□□□□□ -0.37
MCF2-209ENST00000520602 PSME1Q06323 249 aa12.76□□□□□ -0.37
MCF2-209ENST00000520602 TMEM57Q8N5G2 664 aa12.76□□□□□ -0.37
MCF2-209ENST00000520602 RNF17Q9BXT8 1623 aaKnown RBP12.76□□□□□ -0.37
MCF2-209ENST00000520602 KDM5AP29375 1690 aaKnown RBP12.76□□□□□ -0.37
MCF2-209ENST00000520602 RLBP1P12271 317 aa12.76□□□□□ -0.37
MCF2-209ENST00000520602 FAM83GA6ND36 823 aa12.75□□□□□ -0.37
MCF2-209ENST00000520602 TRIM27P14373 513 aa12.75□□□□□ -0.37
MCF2-209ENST00000520602 TSPYL4Q9UJ04 414 aa12.75□□□□□ -0.37
MCF2-209ENST00000520602 MAP3K4Q9Y6R4 1608 aa12.75□□□□□ -0.37
MCF2-209ENST00000520602 ACEP12821 1306 aa12.74□□□□□ -0.37
MCF2-209ENST00000520602 CT47B1P0C2W7 299 aaPredicted RBP12.74□□□□□ -0.37
MCF2-209ENST00000520602 AAMPQ13685 434 aa12.74□□□□□ -0.37
MCF2-209ENST00000520602 API5Q9BZZ5 524 aaKnown RBP12.74□□□□□ -0.37
MCF2-209ENST00000520602 SYNMO15061 1565 aa12.74□□□□□ -0.37
MCF2-209ENST00000520602 CFAP74Q9C0B2 1584 aa12.74□□□□□ -0.37
MCF2-209ENST00000520602 INO80Q9ULG1 1556 aaPredicted RBP12.74□□□□□ -0.37
MCF2-209ENST00000520602 MCM10Q7L590 875 aa12.74□□□□□ -0.37
MCF2-209ENST00000520602 PHACTR3Q96KR7 559 aa12.74□□□□□ -0.37
MCF2-209ENST00000520602 MIS18AQ9NYP9 233 aa12.74□□□□□ -0.37
MCF2-209ENST00000520602 PCDHB15Q9Y5E8 787 aa12.74□□□□□ -0.37
MCF2-209ENST00000520602 INSRP06213 1382 aa12.74□□□□□ -0.37
MCF2-209ENST00000520602 ZNF521Q96K83 1311 aa12.74□□□□□ -0.37
MCF2-209ENST00000520602 HSCBQ8IWL3 235 aa12.73□□□□□ -0.37
MCF2-209ENST00000520602 PPIP5K1Q6PFW1 1433 aa12.73□□□□□ -0.37
MCF2-209ENST00000520602 HSP90AB1P08238 724 aaKnown RBP12.73□□□□□ -0.37
MCF2-209ENST00000520602 CCDC27Q2M243 656 aa12.73□□□□□ -0.37
MCF2-209ENST00000520602 ESCO1Q5FWF5 840 aa12.73□□□□□ -0.37
MCF2-209ENST00000520602 TSPOAP1O95153 1857 aa12.72□□□□□ -0.37
MCF2-209ENST00000520602 CASC1Q6TDU7 716 aa12.72□□□□□ -0.37
MCF2-209ENST00000520602 POLR1AO95602 1720 aaPredicted RBP12.72□□□□□ -0.37
MCF2-209ENST00000520602 HSP90AB2PQ58FF8 381 aa12.72□□□□□ -0.37
MCF2-209ENST00000520602 EIF2S2P20042 333 aaKnown RBP12.71□□□□□ -0.37
MCF2-209ENST00000520602 CEP152O94986 1710 aa12.71□□□□□ -0.37
MCF2-209ENST00000520602 KIDINS220Q9ULH0 1771 aa12.71□□□□□ -0.37
MCF2-209ENST00000520602 CSB-PGBD3P0DP91 1061 aa12.71□□□□□ -0.38
MCF2-209ENST00000520602 AEBP1Q8IUX7 1158 aa12.71□□□□□ -0.38
MCF2-209ENST00000520602 PPRC1Q5VV67 1664 aaKnown RBP12.71□□□□□ -0.38
MCF2-209ENST00000520602 OS9Q13438 667 aaPredicted RBP12.7□□□□□ -0.38
MCF2-209ENST00000520602 XPCQ01831 940 aaPredicted RBP12.7□□□□□ -0.38
MCF2-209ENST00000520602 ABCC11Q96J66 1382 aa12.7□□□□□ -0.38
MCF2-209ENST00000520602 ABCA6Q8N139 1617 aa12.7□□□□□ -0.38
MCF2-209ENST00000520602 A0A0G2JS52 829 aa12.69□□□□□ -0.38
MCF2-209ENST00000520602 FKBP5Q13451 457 aaPredicted RBP12.69□□□□□ -0.38
MCF2-209ENST00000520602 TRIM35Q9UPQ4 493 aa12.69□□□□□ -0.38
MCF2-209ENST00000520602 TRMT2AQ8IZ69 625 aaKnown RBP12.69□□□□□ -0.38
MCF2-209ENST00000520602 SLC4A2P04920 1241 aa12.69□□□□□ -0.38
MCF2-209ENST00000520602 TTC21BQ7Z4L5 1316 aa12.69□□□□□ -0.38
MCF2-209ENST00000520602 ANKLE2Q86XL3 938 aa12.69□□□□□ -0.38
MCF2-209ENST00000520602 MBIPQ9NS73 344 aa12.69□□□□□ -0.38
MCF2-209ENST00000520602 FOXD4L1Q9NU39 408 aa12.69□□□□□ -0.38
MCF2-209ENST00000520602 HMMRO75330 724 aa12.68□□□□□ -0.38
MCF2-209ENST00000520602 LTKP29376 864 aa12.68□□□□□ -0.38
MCF2-209ENST00000520602 TEFQ10587 303 aa12.68□□□□□ -0.38
MCF2-209ENST00000520602 METP08581 1390 aa12.68□□□□□ -0.38
MCF2-209ENST00000520602 TSPYL6Q8N831 410 aa12.67□□□□□ -0.38
MCF2-209ENST00000520602 IFT57Q9NWB7 429 aa12.67□□□□□ -0.38
MCF2-209ENST00000520602 RSPH6AQ9H0K4 717 aa12.67□□□□□ -0.38
MCF2-209ENST00000520602 C22orf23Q9BZE7 217 aa12.67□□□□□ -0.38
MCF2-209ENST00000520602 ADGRB3O60242 1522 aa12.66□□□□□ -0.38
MCF2-209ENST00000520602 LAMC1P11047 1609 aa12.66□□□□□ -0.38
MCF2-209ENST00000520602 KDM2BQ8NHM5 1336 aa12.66□□□□□ -0.38
MCF2-209ENST00000520602 ARHGAP31Q2M1Z3 1444 aa12.66□□□□□ -0.38
MCF2-209ENST00000520602 GAS2L2Q8NHY3 880 aa12.66□□□□□ -0.38
MCF2-209ENST00000520602 IL16Q14005 1332 aa12.65□□□□□ -0.38
MCF2-209ENST00000520602 LMTK2Q8IWU2 1503 aa12.65□□□□□ -0.38
MCF2-209ENST00000520602 EIF4A2Q14240 407 aaKnown RBP12.65□□□□□ -0.38
MCF2-209ENST00000520602 ALDH1L2Q3SY69 923 aa12.65□□□□□ -0.38
MCF2-209ENST00000520602 USHBP1Q8N6Y0 703 aa12.65□□□□□ -0.38
MCF2-209ENST00000520602 CFAP44Q96MT7 982 aa12.65□□□□□ -0.38
MCF2-209ENST00000520602 C8orf58Q8NAV2 365 aa12.65□□□□□ -0.38
MCF2-209ENST00000520602 RTN4Q9NQC3 1192 aaKnown RBP12.65□□□□□ -0.38
MCF2-209ENST00000520602 NFKBIBQ15653 356 aa12.65□□□□□ -0.39
MCF2-209ENST00000520602 C8orf34Q49A92 452 aa12.64□□□□□ -0.39
MCF2-209ENST00000520602 PROSER2Q86WR7 435 aaPredicted RBP12.64□□□□□ -0.39
MCF2-209ENST00000520602 ZNF428Q96B54 188 aa12.64□□□□□ -0.39
MCF2-209ENST00000520602 GZF1Q9H116 711 aaPredicted RBP12.64□□□□□ -0.39
MCF2-209ENST00000520602 TRIM6-TRIM34B2RNG4 842 aa12.64□□□□□ -0.39
MCF2-209ENST00000520602 KRT24Q2M2I5 525 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms