RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 TRPM3Q9HCF6 1732 aaPredicted RBP19.42■□□□□ 0.7
SDC2-203ENST00000519587 NSD3Q9BZ95 1437 aa19.42■□□□□ 0.7
SDC2-203ENST00000519587 FOXO3O43524 673 aa19.41■□□□□ 0.7
SDC2-203ENST00000519587 PSME1Q06323 249 aa19.41■□□□□ 0.7
SDC2-203ENST00000519587 PHLPP1O60346 1717 aa19.4■□□□□ 0.7
SDC2-203ENST00000519587 PXDNQ92626 1479 aa19.4■□□□□ 0.7
SDC2-203ENST00000519587 KNSTRNQ9Y448 316 aa19.39■□□□□ 0.69
SDC2-203ENST00000519587 TTC21AQ8NDW8 1320 aa19.38■□□□□ 0.69
SDC2-203ENST00000519587 UPF1Q92900 1129 aaKnown RBP eCLIP19.38■□□□□ 0.69
SDC2-203ENST00000519587 ANKRD26Q9UPS8 1709 aa19.37■□□□□ 0.69
SDC2-203ENST00000519587 SBNO1A3KN83 1393 aa19.37■□□□□ 0.69
SDC2-203ENST00000519587 CGNL1Q0VF96 1302 aa19.37■□□□□ 0.69
SDC2-203ENST00000519587 JCADQ9P266 1359 aa19.36■□□□□ 0.69
SDC2-203ENST00000519587 KRT28Q7Z3Y7 464 aa19.36■□□□□ 0.69
SDC2-203ENST00000519587 ALS2Q96Q42 1657 aa19.36■□□□□ 0.69
SDC2-203ENST00000519587 TNS3Q68CZ2 1445 aa19.35■□□□□ 0.69
SDC2-203ENST00000519587 SSH2Q76I76 1423 aa19.35■□□□□ 0.69
SDC2-203ENST00000519587 NSD2O96028 1365 aa19.35■□□□□ 0.69
SDC2-203ENST00000519587 PIK3C2AO00443 1686 aa19.35■□□□□ 0.69
SDC2-203ENST00000519587 COL16A1Q07092 1604 aaPredicted RBP19.35■□□□□ 0.69
SDC2-203ENST00000519587 USP54Q70EL1 1684 aa19.34■□□□□ 0.69
SDC2-203ENST00000519587 SOS2Q07890 1332 aaPredicted RBP19.34■□□□□ 0.69
SDC2-203ENST00000519587 TTC21BQ7Z4L5 1316 aa19.34■□□□□ 0.69
SDC2-203ENST00000519587 PAK3O75914 559 aaPredicted RBP19.34■□□□□ 0.69
SDC2-203ENST00000519587 CARD14Q9BXL6 1004 aa19.34■□□□□ 0.69
SDC2-203ENST00000519587 ARHGEF10O15013 1369 aa19.33■□□□□ 0.69
SDC2-203ENST00000519587 XPCQ01831 940 aaPredicted RBP19.33■□□□□ 0.68
SDC2-203ENST00000519587 NPC1L1Q9UHC9 1359 aa19.32■□□□□ 0.68
SDC2-203ENST00000519587 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.32■□□□□ 0.68
SDC2-203ENST00000519587 DDX17Q92841 729 aaKnown RBP19.32■□□□□ 0.68
SDC2-203ENST00000519587 LRP6O75581 1613 aa19.3■□□□□ 0.68
SDC2-203ENST00000519587 PER1O15534 1290 aaPredicted RBP19.3■□□□□ 0.68
SDC2-203ENST00000519587 SPATA31A3Q5VYP0 1347 aa19.29■□□□□ 0.68
SDC2-203ENST00000519587 ABTB2Q8N961 1025 aa19.28■□□□□ 0.68
SDC2-203ENST00000519587 LRRC59Q96AG4 307 aaKnown RBP19.28■□□□□ 0.68
SDC2-203ENST00000519587 AMER1Q5JTC6 1135 aaPredicted RBP19.27■□□□□ 0.68
SDC2-203ENST00000519587 ZNF772Q68DY9 489 aaPredicted RBP19.27■□□□□ 0.68
SDC2-203ENST00000519587 LMOD2Q6P5Q4 547 aa19.27■□□□□ 0.68
SDC2-203ENST00000519587 SHPRHQ149N8 1683 aa19.27■□□□□ 0.67
SDC2-203ENST00000519587 OVOS2A0A0J9YW53 1432 aa19.26■□□□□ 0.67
SDC2-203ENST00000519587 OVOS2Q6IE36 1432 aa19.26■□□□□ 0.67
SDC2-203ENST00000519587 COL22A1Q8NFW1 1626 aaPredicted RBP19.26■□□□□ 0.67
SDC2-203ENST00000519587 MARF1Q9Y4F3 1742 aaKnown RBP19.26■□□□□ 0.67
SDC2-203ENST00000519587 MEX3CQ5U5Q3 659 aaKnown RBP19.26■□□□□ 0.67
SDC2-203ENST00000519587 NME9Q86XW9 330 aa19.26■□□□□ 0.67
SDC2-203ENST00000519587 USP31Q70CQ4 1352 aa19.26■□□□□ 0.67
SDC2-203ENST00000519587 FYB1O15117 783 aa19.25■□□□□ 0.67
SDC2-203ENST00000519587 NLRP13Q86W25 1043 aa19.25■□□□□ 0.67
SDC2-203ENST00000519587 COG3Q96JB2 828 aa19.25■□□□□ 0.67
SDC2-203ENST00000519587 ABCA3Q99758 1704 aa19.25■□□□□ 0.67
SDC2-203ENST00000519587 CRYBG1Q9Y4K1 1723 aa19.25■□□□□ 0.67
SDC2-203ENST00000519587 PHRF1Q9P1Y6 1649 aaKnown RBP19.25■□□□□ 0.67
SDC2-203ENST00000519587 SPATA31A6Q5VVP1 1343 aa19.25■□□□□ 0.67
SDC2-203ENST00000519587 NLRP6P59044 892 aa19.24■□□□□ 0.67
SDC2-203ENST00000519587 GGNBP2Q9H3C7 697 aa19.24■□□□□ 0.67
SDC2-203ENST00000519587 CC2D1BQ5T0F9 858 aaKnown RBP19.23■□□□□ 0.67
SDC2-203ENST00000519587 DIEXFQ68CQ4 756 aaKnown RBP19.23■□□□□ 0.67
SDC2-203ENST00000519587 SLIT3O75094 1523 aa19.23■□□□□ 0.67
SDC2-203ENST00000519587 PNPLA6Q8IY17 1366 aa19.21■□□□□ 0.67
SDC2-203ENST00000519587 MORC1Q86VD1 984 aa19.21■□□□□ 0.67
SDC2-203ENST00000519587 CDK12Q9NYV4 1490 aaPredicted RBP19.21■□□□□ 0.67
SDC2-203ENST00000519587 USP19O94966 1318 aa19.21■□□□□ 0.67
SDC2-203ENST00000519587 ANP32CO43423 234 aa19.2■□□□□ 0.66
SDC2-203ENST00000519587 RXRBP28702 533 aa19.2■□□□□ 0.66
SDC2-203ENST00000519587 NUTM2GQ5VZR2 741 aa19.2■□□□□ 0.66
SDC2-203ENST00000519587 PARD3Q8TEW0 1356 aa19.19■□□□□ 0.66
SDC2-203ENST00000519587 RALBP1Q15311 655 aa19.19■□□□□ 0.66
SDC2-203ENST00000519587 KCNH5Q8NCM2 988 aa19.19■□□□□ 0.66
SDC2-203ENST00000519587 HAP1P54257 671 aaPredicted RBP19.18■□□□□ 0.66
SDC2-203ENST00000519587 CNGB1Q14028 1251 aaPredicted RBP19.18■□□□□ 0.66
SDC2-203ENST00000519587 NFAT5O94916 1531 aa19.17■□□□□ 0.66
SDC2-203ENST00000519587 ZRANB1Q9UGI0 708 aa19.17■□□□□ 0.66
SDC2-203ENST00000519587 LTN1O94822 1766 aa19.16■□□□□ 0.66
SDC2-203ENST00000519587 AATKQ6ZMQ8 1374 aa19.16■□□□□ 0.66
SDC2-203ENST00000519587 MAP2P11137 1827 aaKnown RBP19.15■□□□□ 0.66
SDC2-203ENST00000519587 PRKRIP1Q9H875 184 aaPredicted RBP19.14■□□□□ 0.65
SDC2-203ENST00000519587 TNNT2P45379 298 aaPredicted RBP19.13■□□□□ 0.65
SDC2-203ENST00000519587 ABCC6O95255 1503 aa19.13■□□□□ 0.65
SDC2-203ENST00000519587 SRCAPQ6ZRS2 3230 aa19.12■□□□□ 0.65
SDC2-203ENST00000519587 MYBBP1AQ9BQG0 1328 aaKnown RBP19.12■□□□□ 0.65
SDC2-203ENST00000519587 PLEKHG5O94827 1062 aa19.12■□□□□ 0.65
SDC2-203ENST00000519587 GCP02774 474 aa19.12■□□□□ 0.65
SDC2-203ENST00000519587 SMG6Q86US8 1419 aaKnown RBP19.11■□□□□ 0.65
SDC2-203ENST00000519587 KIF24Q5T7B8 1368 aa19.11■□□□□ 0.65
SDC2-203ENST00000519587 SOX12O15370 315 aa19.11■□□□□ 0.65
SDC2-203ENST00000519587 RTL1A6NKG5 1358 aa19.1■□□□□ 0.65
SDC2-203ENST00000519587 CPDO75976 1380 aa19.1■□□□□ 0.65
SDC2-203ENST00000519587 CABLES1Q8TDN4 633 aa19.1■□□□□ 0.65
SDC2-203ENST00000519587 RGS12O14924 1447 aa19.09■□□□□ 0.65
SDC2-203ENST00000519587 COL14A1Q05707 1796 aaKnown RBP19.09■□□□□ 0.65
SDC2-203ENST00000519587 AFF2P51816 1311 aa19.08■□□□□ 0.65
SDC2-203ENST00000519587 NUTM2BA6NNL0 878 aaPredicted RBP19.08■□□□□ 0.64
SDC2-203ENST00000519587 NUTM2EB1AL46 878 aaPredicted RBP19.08■□□□□ 0.64
SDC2-203ENST00000519587 NUTM2AQ8IVF1 878 aaPredicted RBP19.08■□□□□ 0.64
SDC2-203ENST00000519587 PPP2R1AP30153 589 aa19.07■□□□□ 0.64
SDC2-203ENST00000519587 FLT4P35916 1363 aa19.06■□□□□ 0.64
SDC2-203ENST00000519587 PRDM11Q9NQV5 511 aa19.06■□□□□ 0.64
SDC2-203ENST00000519587 KIAA0232Q92628 1395 aa19.06■□□□□ 0.64
SDC2-203ENST00000519587 PEAK1Q9H792 1746 aa19.05■□□□□ 0.64
SDC2-203ENST00000519587 MAP3K19Q56UN5 1328 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms