RNA–Protein interactions for RNA: ENST00000518678.1

TRAM1-202, Transcript of translocation associated membrane protein 1, humanhuman

TSL 4

Gene TRAM1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-202ENST00000518678 PSME1Q06323 249 aa24.56■■□□□ 1.52
TRAM1-202ENST00000518678 LRRC59Q96AG4 307 aaKnown RBP24.56■■□□□ 1.52
TRAM1-202ENST00000518678 TERF2IPQ9NYB0 399 aa24.56■■□□□ 1.52
TRAM1-202ENST00000518678 SOS2Q07890 1332 aaPredicted RBP24.56■■□□□ 1.52
TRAM1-202ENST00000518678 ZNF692Q9BU19 519 aaPredicted RBP24.55■■□□□ 1.52
TRAM1-202ENST00000518678 ANKRD36BQ8N2N9 1353 aa24.54■■□□□ 1.52
TRAM1-202ENST00000518678 KRT28Q7Z3Y7 464 aa24.54■■□□□ 1.52
TRAM1-202ENST00000518678 HDGFL2Q7Z4V5 671 aaPredicted RBP24.54■■□□□ 1.52
TRAM1-202ENST00000518678 MON2Q7Z3U7 1717 aa24.54■■□□□ 1.52
TRAM1-202ENST00000518678 A0A1W2PP64 1363 aa24.54■■□□□ 1.52
TRAM1-202ENST00000518678 USP6P35125 1406 aa24.53■■□□□ 1.52
TRAM1-202ENST00000518678 KTN1Q86UP2 1357 aaKnown RBP24.53■■□□□ 1.52
TRAM1-202ENST00000518678 TRPM3Q9HCF6 1732 aaPredicted RBP24.52■■□□□ 1.52
TRAM1-202ENST00000518678 BRD4O60885 1362 aaPredicted RBP24.52■■□□□ 1.52
TRAM1-202ENST00000518678 ZNF316A6NFI3 1004 aaPredicted RBP24.51■■□□□ 1.51
TRAM1-202ENST00000518678 AFF2P51816 1311 aa24.51■■□□□ 1.51
TRAM1-202ENST00000518678 SBNO1A3KN83 1393 aa24.5■■□□□ 1.51
TRAM1-202ENST00000518678 NRKQ7Z2Y5 1582 aa24.5■■□□□ 1.51
TRAM1-202ENST00000518678 COL22A1Q8NFW1 1626 aaPredicted RBP24.5■■□□□ 1.51
TRAM1-202ENST00000518678 ADAMTS2O95450 1211 aa24.49■■□□□ 1.51
TRAM1-202ENST00000518678 C8orf37Q96NL8 207 aa24.49■■□□□ 1.51
TRAM1-202ENST00000518678 SSH2Q76I76 1423 aa24.49■■□□□ 1.51
TRAM1-202ENST00000518678 EDC4Q6P2E9 1401 aaKnown RBP24.47■■□□□ 1.51
TRAM1-202ENST00000518678 TNS3Q68CZ2 1445 aa24.46■■□□□ 1.51
TRAM1-202ENST00000518678 PANK3Q9H999 370 aa24.46■■□□□ 1.51
TRAM1-202ENST00000518678 SPATA31A3Q5VYP0 1347 aa24.45■■□□□ 1.5
TRAM1-202ENST00000518678 ZNF772Q68DY9 489 aaPredicted RBP24.45■■□□□ 1.5
TRAM1-202ENST00000518678 ALS2Q96Q42 1657 aa24.45■■□□□ 1.5
TRAM1-202ENST00000518678 TTC21BQ7Z4L5 1316 aa24.44■■□□□ 1.5
TRAM1-202ENST00000518678 PAK3O75914 559 aaPredicted RBP24.44■■□□□ 1.5
TRAM1-202ENST00000518678 CARD14Q9BXL6 1004 aa24.44■■□□□ 1.5
TRAM1-202ENST00000518678 TTC21AQ8NDW8 1320 aa24.43■■□□□ 1.5
TRAM1-202ENST00000518678 MARF1Q9Y4F3 1742 aaKnown RBP24.43■■□□□ 1.5
TRAM1-202ENST00000518678 NSD3Q9BZ95 1437 aa24.42■■□□□ 1.5
TRAM1-202ENST00000518678 ARHGEF10O15013 1369 aa24.41■■□□□ 1.5
TRAM1-202ENST00000518678 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.39■■□□□ 1.49
TRAM1-202ENST00000518678 PIK3C2AO00443 1686 aa24.39■■□□□ 1.49
TRAM1-202ENST00000518678 LMOD2Q6P5Q4 547 aa24.37■■□□□ 1.49
TRAM1-202ENST00000518678 ABTB2Q8N961 1025 aa24.37■■□□□ 1.49
TRAM1-202ENST00000518678 NGLY1Q96IV0 654 aa24.37■■□□□ 1.49
TRAM1-202ENST00000518678 PLEKHG5O94827 1062 aa24.36■■□□□ 1.49
TRAM1-202ENST00000518678 RXRBP28702 533 aa24.36■■□□□ 1.49
TRAM1-202ENST00000518678 RGS12O14924 1447 aa24.35■■□□□ 1.49
TRAM1-202ENST00000518678 PER1O15534 1290 aaPredicted RBP24.35■■□□□ 1.49
TRAM1-202ENST00000518678 DDX10Q13206 875 aaKnown RBP24.35■■□□□ 1.49
TRAM1-202ENST00000518678 QTRT2Q9H974 415 aaKnown RBP24.35■■□□□ 1.49
TRAM1-202ENST00000518678 KIF20BQ96Q89 1820 aa24.35■■□□□ 1.49
TRAM1-202ENST00000518678 USP54Q70EL1 1684 aa24.34■■□□□ 1.49
TRAM1-202ENST00000518678 USP31Q70CQ4 1352 aa24.34■■□□□ 1.49
TRAM1-202ENST00000518678 NME9Q86XW9 330 aa24.34■■□□□ 1.49
TRAM1-202ENST00000518678 ABCA3Q99758 1704 aa24.34■■□□□ 1.49
TRAM1-202ENST00000518678 CGNL1Q0VF96 1302 aa24.34■■□□□ 1.49
TRAM1-202ENST00000518678 KNSTRNQ9Y448 316 aa24.33■■□□□ 1.49
TRAM1-202ENST00000518678 FYB1O15117 783 aa24.32■■□□□ 1.48
TRAM1-202ENST00000518678 NLRP6P59044 892 aa24.32■■□□□ 1.48
TRAM1-202ENST00000518678 NUTM2GQ5VZR2 741 aa24.32■■□□□ 1.48
TRAM1-202ENST00000518678 NLRP13Q86W25 1043 aa24.32■■□□□ 1.48
TRAM1-202ENST00000518678 CRYBG1Q9Y4K1 1723 aa24.31■■□□□ 1.48
TRAM1-202ENST00000518678 OVOS2A0A0J9YW53 1432 aa24.3■■□□□ 1.48
TRAM1-202ENST00000518678 OVOS2Q6IE36 1432 aa24.3■■□□□ 1.48
TRAM1-202ENST00000518678 CABLES1Q8TDN4 633 aa24.3■■□□□ 1.48
TRAM1-202ENST00000518678 ZRANB1Q9UGI0 708 aa24.3■■□□□ 1.48
TRAM1-202ENST00000518678 USP21Q9UK80 565 aa24.3■■□□□ 1.48
TRAM1-202ENST00000518678 USP19O94966 1318 aa24.3■■□□□ 1.48
TRAM1-202ENST00000518678 BCL9LQ86UU0 1499 aa24.28■■□□□ 1.48
TRAM1-202ENST00000518678 CDK12Q9NYV4 1490 aaPredicted RBP24.28■■□□□ 1.48
TRAM1-202ENST00000518678 AMER1Q5JTC6 1135 aaPredicted RBP24.28■■□□□ 1.48
TRAM1-202ENST00000518678 GGNBP2Q9H3C7 697 aa24.28■■□□□ 1.48
TRAM1-202ENST00000518678 NSD2O96028 1365 aa24.28■■□□□ 1.48
TRAM1-202ENST00000518678 PHRF1Q9P1Y6 1649 aaKnown RBP24.28■■□□□ 1.48
TRAM1-202ENST00000518678 SLIT3O75094 1523 aa24.27■■□□□ 1.48
TRAM1-202ENST00000518678 ANKRD26Q9UPS8 1709 aa24.27■■□□□ 1.48
TRAM1-202ENST00000518678 RBM6P78332 1123 aaKnown RBP24.26■■□□□ 1.47
TRAM1-202ENST00000518678 FNBP4Q8N3X1 1017 aaPredicted RBP24.26■■□□□ 1.47
TRAM1-202ENST00000518678 COG3Q96JB2 828 aa24.26■■□□□ 1.47
TRAM1-202ENST00000518678 ATRNO75882 1429 aa24.26■■□□□ 1.47
TRAM1-202ENST00000518678 UPF1Q92900 1129 aaKnown RBP eCLIP24.25■■□□□ 1.47
TRAM1-202ENST00000518678 NPC1L1Q9UHC9 1359 aa24.25■■□□□ 1.47
TRAM1-202ENST00000518678 PLCH1Q4KWH8 1693 aa24.24■■□□□ 1.47
TRAM1-202ENST00000518678 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.21■■□□□ 1.47
TRAM1-202ENST00000518678 GCP02774 474 aa24.21■■□□□ 1.47
TRAM1-202ENST00000518678 KCNH5Q8NCM2 988 aa24.21■■□□□ 1.47
TRAM1-202ENST00000518678 HAP1P54257 671 aaPredicted RBP24.2■■□□□ 1.46
TRAM1-202ENST00000518678 GLI3P10071 1580 aa24.2■■□□□ 1.46
TRAM1-202ENST00000518678 NFAT5O94916 1531 aa24.2■■□□□ 1.46
TRAM1-202ENST00000518678 TRPC5Q9UL62 973 aaPredicted RBP24.19■■□□□ 1.46
TRAM1-202ENST00000518678 SLIT2O94813 1529 aa24.19■■□□□ 1.46
TRAM1-202ENST00000518678 CC2D1BQ5T0F9 858 aaKnown RBP24.18■■□□□ 1.46
TRAM1-202ENST00000518678 MORC1Q86VD1 984 aa24.17■■□□□ 1.46
TRAM1-202ENST00000518678 EP400Q96L91 3159 aa24.16■■□□□ 1.46
TRAM1-202ENST00000518678 SOX12O15370 315 aa24.15■■□□□ 1.46
TRAM1-202ENST00000518678 CPDO75976 1380 aa24.15■■□□□ 1.46
TRAM1-202ENST00000518678 BRWD3Q6RI45 1802 aa24.14■■□□□ 1.45
TRAM1-202ENST00000518678 ZC3H6P61129 1189 aaKnown RBP24.13■■□□□ 1.45
TRAM1-202ENST00000518678 CNGB1Q14028 1251 aaPredicted RBP24.13■■□□□ 1.45
TRAM1-202ENST00000518678 KIAA0232Q92628 1395 aa24.13■■□□□ 1.45
TRAM1-202ENST00000518678 NRAPQ86VF7 1730 aa24.13■■□□□ 1.45
TRAM1-202ENST00000518678 ARHGEF25Q86VW2 580 aa24.12■■□□□ 1.45
TRAM1-202ENST00000518678 AATKQ6ZMQ8 1374 aa24.12■■□□□ 1.45
TRAM1-202ENST00000518678 NWD2Q9ULI1 1742 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms