RNA–Protein interactions for RNA: ENST00000517919.5

RUNX1T1-208, Transcript of RUNX1 translocation partner 1, humanhuman

TSL 4

Gene RUNX1T1, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-208ENST00000517919 RIMS2Q9UQ26 1411 aa12.14□□□□□ -0.47
RUNX1T1-208ENST00000517919 A0A0C4DFX4 3053 aa12.14□□□□□ -0.47
RUNX1T1-208ENST00000517919 EIF2AK4Q9P2K8 1649 aaKnown RBP12.13□□□□□ -0.47
RUNX1T1-208ENST00000517919 MTFR1LQ9H019 292 aa12.13□□□□□ -0.47
RUNX1T1-208ENST00000517919 MSH5O43196 834 aa12.12□□□□□ -0.47
RUNX1T1-208ENST00000517919 XPCQ01831 940 aaPredicted RBP12.12□□□□□ -0.47
RUNX1T1-208ENST00000517919 NLGN2Q8NFZ4 835 aa12.12□□□□□ -0.47
RUNX1T1-208ENST00000517919 CCER2I3L3R5 266 aa12.11□□□□□ -0.47
RUNX1T1-208ENST00000517919 TOMM70O94826 608 aa12.11□□□□□ -0.47
RUNX1T1-208ENST00000517919 USP19O94966 1318 aa12.11□□□□□ -0.47
RUNX1T1-208ENST00000517919 ABCA3Q99758 1704 aa12.1□□□□□ -0.47
RUNX1T1-208ENST00000517919 CCDC141Q6ZP82 1450 aa12.08□□□□□ -0.47
RUNX1T1-208ENST00000517919 CHGAP10645 457 aaKnown RBP12.08□□□□□ -0.48
RUNX1T1-208ENST00000517919 PROM2Q8N271 834 aa12.08□□□□□ -0.48
RUNX1T1-208ENST00000517919 ABHD8Q96I13 439 aa12.08□□□□□ -0.48
RUNX1T1-208ENST00000517919 ARHGEF28Q8N1W1 1705 aaKnown RBP12.08□□□□□ -0.48
RUNX1T1-208ENST00000517919 SPATA31A5Q5VU36 1347 aa12.08□□□□□ -0.48
RUNX1T1-208ENST00000517919 SPATA31A7Q8IWB4 1347 aa12.08□□□□□ -0.48
RUNX1T1-208ENST00000517919 DHX57Q6P158 1386 aaKnown RBP12.07□□□□□ -0.48
RUNX1T1-208ENST00000517919 GRIN3BO60391 1043 aa12.07□□□□□ -0.48
RUNX1T1-208ENST00000517919 RTL5Q5HYW3 569 aaPredicted RBP12.07□□□□□ -0.48
RUNX1T1-208ENST00000517919 VPS8Q8N3P4 1428 aa12.06□□□□□ -0.48
RUNX1T1-208ENST00000517919 NRXN3Q9Y4C0 1643 aa12.06□□□□□ -0.48
RUNX1T1-208ENST00000517919 GCC2Q8IWJ2 1684 aa12.06□□□□□ -0.48
RUNX1T1-208ENST00000517919 NPHP3Q7Z494 1330 aa12.06□□□□□ -0.48
RUNX1T1-208ENST00000517919 CABLES1Q8TDN4 633 aa12.05□□□□□ -0.48
RUNX1T1-208ENST00000517919 COL24A1Q17RW2 1714 aa12.05□□□□□ -0.48
RUNX1T1-208ENST00000517919 CCDC18Q5T9S5 1454 aa12.03□□□□□ -0.48
RUNX1T1-208ENST00000517919 SPATA31A3Q5VYP0 1347 aa12.03□□□□□ -0.48
RUNX1T1-208ENST00000517919 CCNB3Q8WWL7 1395 aa12.03□□□□□ -0.48
RUNX1T1-208ENST00000517919 FYCO1Q9BQS8 1478 aa12.02□□□□□ -0.48
RUNX1T1-208ENST00000517919 ARHGEF5Q12774 1597 aa12.02□□□□□ -0.49
RUNX1T1-208ENST00000517919 FOXO3O43524 673 aa12.02□□□□□ -0.49
RUNX1T1-208ENST00000517919 NOP58Q9Y2X3 529 aaKnown RBP12.02□□□□□ -0.49
RUNX1T1-208ENST00000517919 PLSCR1O15162 318 aa12□□□□□ -0.49
RUNX1T1-208ENST00000517919 PRDM10Q9NQV6 1147 aa12□□□□□ -0.49
RUNX1T1-208ENST00000517919 FOXN1O15353 648 aa11.99□□□□□ -0.49
RUNX1T1-208ENST00000517919 SLC15A2Q16348 729 aa11.99□□□□□ -0.49
RUNX1T1-208ENST00000517919 PTF1AQ7RTS3 328 aa11.99□□□□□ -0.49
RUNX1T1-208ENST00000517919 KLHL34Q8N239 644 aa11.99□□□□□ -0.49
RUNX1T1-208ENST00000517919 BCL11BQ9C0K0 894 aaPredicted RBP11.99□□□□□ -0.49
RUNX1T1-208ENST00000517919 BTG4Q9NY30 223 aa11.99□□□□□ -0.49
RUNX1T1-208ENST00000517919 METP08581 1390 aa11.99□□□□□ -0.49
RUNX1T1-208ENST00000517919 DUOX2Q9NRD8 1548 aa11.98□□□□□ -0.49
RUNX1T1-208ENST00000517919 TULP4Q9NRJ4 1543 aa11.98□□□□□ -0.49
RUNX1T1-208ENST00000517919 RBM46Q8TBY0 533 aaKnown RBP11.98□□□□□ -0.49
RUNX1T1-208ENST00000517919 SBF2Q86WG5 1849 aa11.97□□□□□ -0.49
RUNX1T1-208ENST00000517919 PEAK1Q9H792 1746 aa11.97□□□□□ -0.49
RUNX1T1-208ENST00000517919 LMTK2Q8IWU2 1503 aa11.96□□□□□ -0.49
RUNX1T1-208ENST00000517919 UBTFP17480 764 aaKnown RBP11.96□□□□□ -0.49
RUNX1T1-208ENST00000517919 NMRK2Q9NPI5 230 aa11.96□□□□□ -0.49
RUNX1T1-208ENST00000517919 SLC52A1Q9NWF4 448 aa11.96□□□□□ -0.49
RUNX1T1-208ENST00000517919 TIMELESSQ9UNS1 1208 aa11.96□□□□□ -0.49
RUNX1T1-208ENST00000517919 ANP32CO43423 234 aa11.95□□□□□ -0.5
RUNX1T1-208ENST00000517919 PPP4R2Q9NY27 417 aa11.95□□□□□ -0.5
RUNX1T1-208ENST00000517919 RRBP1Q9P2E9 1410 aaKnown RBP11.94□□□□□ -0.5
RUNX1T1-208ENST00000517919 SPATA31A1Q5TZJ5 1347 aa11.94□□□□□ -0.5
RUNX1T1-208ENST00000517919 ESCO1Q5FWF5 840 aa11.94□□□□□ -0.5
RUNX1T1-208ENST00000517919 STK32BQ9NY57 414 aa11.94□□□□□ -0.5
RUNX1T1-208ENST00000517919 USP35Q9P2H5 1018 aa11.94□□□□□ -0.5
RUNX1T1-208ENST00000517919 COL14A1Q05707 1796 aaKnown RBP11.94□□□□□ -0.5
RUNX1T1-208ENST00000517919 PRAG1Q86YV5 1406 aa11.94□□□□□ -0.5
RUNX1T1-208ENST00000517919 CASKIN1Q8WXD9 1431 aa11.94□□□□□ -0.5
RUNX1T1-208ENST00000517919 DLL1O00548 723 aa11.93□□□□□ -0.5
RUNX1T1-208ENST00000517919 HDGFP51858 240 aaKnown RBP11.93□□□□□ -0.5
RUNX1T1-208ENST00000517919 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.93□□□□□ -0.5
RUNX1T1-208ENST00000517919 CCDC85CA6NKD9 419 aa11.92□□□□□ -0.5
RUNX1T1-208ENST00000517919 FSTL1Q12841 308 aa11.92□□□□□ -0.5
RUNX1T1-208ENST00000517919 SALL2Q9Y467 1007 aaPredicted RBP11.92□□□□□ -0.5
RUNX1T1-208ENST00000517919 PAPPAQ13219 1627 aa11.92□□□□□ -0.5
RUNX1T1-208ENST00000517919 PLEKHG5O94827 1062 aa11.91□□□□□ -0.5
RUNX1T1-208ENST00000517919 ANP32AP39687 249 aaKnown RBP11.91□□□□□ -0.5
RUNX1T1-208ENST00000517919 GLIPR1L2Q4G1C9 344 aa11.91□□□□□ -0.5
RUNX1T1-208ENST00000517919 TECPR2O15040 1411 aa11.91□□□□□ -0.5
RUNX1T1-208ENST00000517919 C11orf95C9JLR9 678 aaPredicted RBP11.9□□□□□ -0.5
RUNX1T1-208ENST00000517919 TNS3Q68CZ2 1445 aa11.89□□□□□ -0.51
RUNX1T1-208ENST00000517919 ITGAEP38570 1179 aa11.89□□□□□ -0.51
RUNX1T1-208ENST00000517919 PHRF1Q9P1Y6 1649 aaKnown RBP11.89□□□□□ -0.51
RUNX1T1-208ENST00000517919 PITPNM2Q9BZ72 1349 aa11.88□□□□□ -0.51
RUNX1T1-208ENST00000517919 TOPAZ1Q8N9V7 1692 aa11.88□□□□□ -0.51
RUNX1T1-208ENST00000517919 HAP1P54257 671 aaPredicted RBP11.88□□□□□ -0.51
RUNX1T1-208ENST00000517919 ROBO2Q9HCK4 1378 aa11.88□□□□□ -0.51
RUNX1T1-208ENST00000517919 SZT2Q5T011 3432 aa11.87□□□□□ -0.51
RUNX1T1-208ENST00000517919 EIF5BO60841 1220 aaKnown RBP11.87□□□□□ -0.51
RUNX1T1-208ENST00000517919 PDE3BQ13370 1112 aa11.87□□□□□ -0.51
RUNX1T1-208ENST00000517919 TXNRD1Q16881 649 aa11.86□□□□□ -0.51
RUNX1T1-208ENST00000517919 RSPH4AQ5TD94 716 aa11.86□□□□□ -0.51
RUNX1T1-208ENST00000517919 PRPF38BQ5VTL8 546 aaKnown RBP11.86□□□□□ -0.51
RUNX1T1-208ENST00000517919 LRPPRCP42704 1394 aaKnown RBP11.86□□□□□ -0.51
RUNX1T1-208ENST00000517919 CDC42BPGQ6DT37 1551 aa11.86□□□□□ -0.51
RUNX1T1-208ENST00000517919 CCDC144AA2RUR9 1427 aa11.84□□□□□ -0.51
RUNX1T1-208ENST00000517919 CICQ96RK0 1608 aaPredicted RBP11.83□□□□□ -0.52
RUNX1T1-208ENST00000517919 LBX1P52954 281 aa11.83□□□□□ -0.52
RUNX1T1-208ENST00000517919 CCDC136Q96JN2 1154 aa11.83□□□□□ -0.52
RUNX1T1-208ENST00000517919 IPO9Q96P70 1041 aaKnown RBP11.83□□□□□ -0.52
RUNX1T1-208ENST00000517919 ZBTB47Q9UFB7 747 aaPredicted RBP11.83□□□□□ -0.52
RUNX1T1-208ENST00000517919 CTCFP49711 727 aaPredicted RBP11.82□□□□□ -0.52
RUNX1T1-208ENST00000517919 BARGINQ6ZT62 677 aa11.82□□□□□ -0.52
RUNX1T1-208ENST00000517919 KRT28Q7Z3Y7 464 aa11.82□□□□□ -0.52
RUNX1T1-208ENST00000517919 RSPH6AQ9H0K4 717 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms