RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 ABTB2Q8N961 1025 aa15.65■□□□□ 0.1
SCARNA20-201ENST00000516768 SLC12A5Q9H2X9 1139 aa15.65■□□□□ 0.1
SCARNA20-201ENST00000516768 AFF2P51816 1311 aa15.65■□□□□ 0.1
SCARNA20-201ENST00000516768 HAP1P54257 671 aaPredicted RBP15.64■□□□□ 0.09
SCARNA20-201ENST00000516768 ITSN1Q15811 1721 aa15.64■□□□□ 0.09
SCARNA20-201ENST00000516768 PLEKHG5O94827 1062 aa15.63■□□□□ 0.09
SCARNA20-201ENST00000516768 EIF4G2P78344 907 aaKnown RBP eCLIP15.63■□□□□ 0.09
SCARNA20-201ENST00000516768 TMC1Q8TDI8 760 aa15.63■□□□□ 0.09
SCARNA20-201ENST00000516768 QTRT2Q9H974 415 aaKnown RBP15.63■□□□□ 0.09
SCARNA20-201ENST00000516768 TOPAZ1Q8N9V7 1692 aa15.63■□□□□ 0.09
SCARNA20-201ENST00000516768 CPSF1Q10570 1443 aaKnown RBP15.62■□□□□ 0.09
SCARNA20-201ENST00000516768 NUTM2GQ5VZR2 741 aa15.62■□□□□ 0.09
SCARNA20-201ENST00000516768 NLRP13Q86W25 1043 aa15.62■□□□□ 0.09
SCARNA20-201ENST00000516768 TRPM3Q9HCF6 1732 aaPredicted RBP15.62■□□□□ 0.09
SCARNA20-201ENST00000516768 FAM83GA6ND36 823 aa15.61■□□□□ 0.09
SCARNA20-201ENST00000516768 CDCA8Q53HL2 280 aa15.61■□□□□ 0.09
SCARNA20-201ENST00000516768 USP21Q9UK80 565 aa15.61■□□□□ 0.09
SCARNA20-201ENST00000516768 USP6P35125 1406 aa15.6■□□□□ 0.09
SCARNA20-201ENST00000516768 SSH2Q76I76 1423 aa15.6■□□□□ 0.09
SCARNA20-201ENST00000516768 HSPA5P11021 654 aaKnown RBP15.6■□□□□ 0.09
SCARNA20-201ENST00000516768 TERF2IPQ9NYB0 399 aa15.6■□□□□ 0.09
SCARNA20-201ENST00000516768 TTC21BQ7Z4L5 1316 aa15.6■□□□□ 0.09
SCARNA20-201ENST00000516768 RXRBP28702 533 aa15.59■□□□□ 0.09
SCARNA20-201ENST00000516768 NLRP6P59044 892 aa15.59■□□□□ 0.09
SCARNA20-201ENST00000516768 HDGFL2Q7Z4V5 671 aaPredicted RBP15.59■□□□□ 0.09
SCARNA20-201ENST00000516768 ALS2Q96Q42 1657 aa15.59■□□□□ 0.09
SCARNA20-201ENST00000516768 KTN1Q86UP2 1357 aaKnown RBP15.59■□□□□ 0.09
SCARNA20-201ENST00000516768 GCP02774 474 aa15.57■□□□□ 0.08
SCARNA20-201ENST00000516768 UNC5CLQ8IV45 518 aa15.57■□□□□ 0.08
SCARNA20-201ENST00000516768 TRPC5Q9UL62 973 aaPredicted RBP15.57■□□□□ 0.08
SCARNA20-201ENST00000516768 TTC21AQ8NDW8 1320 aa15.57■□□□□ 0.08
SCARNA20-201ENST00000516768 BCL9LQ86UU0 1499 aa15.57■□□□□ 0.08
SCARNA20-201ENST00000516768 NINLQ9Y2I6 1382 aa15.56■□□□□ 0.08
SCARNA20-201ENST00000516768 CD163L1Q9NR16 1453 aa15.55■□□□□ 0.08
SCARNA20-201ENST00000516768 USP19O94966 1318 aa15.55■□□□□ 0.08
SCARNA20-201ENST00000516768 ZC3H6P61129 1189 aaKnown RBP15.55■□□□□ 0.08
SCARNA20-201ENST00000516768 RBM6P78332 1123 aaKnown RBP15.55■□□□□ 0.08
SCARNA20-201ENST00000516768 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.54■□□□□ 0.08
SCARNA20-201ENST00000516768 SLIT2O94813 1529 aa15.53■□□□□ 0.08
SCARNA20-201ENST00000516768 SOCS7O14512 581 aa15.53■□□□□ 0.08
SCARNA20-201ENST00000516768 PRDM11Q9NQV5 511 aa15.53■□□□□ 0.08
SCARNA20-201ENST00000516768 BTG4Q9NY30 223 aa15.53■□□□□ 0.08
SCARNA20-201ENST00000516768 A0A1W2PP64 1363 aa15.52■□□□□ 0.08
SCARNA20-201ENST00000516768 GJD4Q96KN9 370 aaPredicted RBP15.52■□□□□ 0.08
SCARNA20-201ENST00000516768 KIAA0232Q92628 1395 aa15.51■□□□□ 0.07
SCARNA20-201ENST00000516768 CHRNA2Q15822 529 aa15.51■□□□□ 0.07
SCARNA20-201ENST00000516768 KCNH5Q8NCM2 988 aa15.51■□□□□ 0.07
SCARNA20-201ENST00000516768 ZRANB1Q9UGI0 708 aa15.51■□□□□ 0.07
SCARNA20-201ENST00000516768 C11orf95C9JLR9 678 aaPredicted RBP15.5■□□□□ 0.07
SCARNA20-201ENST00000516768 VPS72Q15906 364 aa15.5■□□□□ 0.07
SCARNA20-201ENST00000516768 NME9Q86XW9 330 aa15.5■□□□□ 0.07
SCARNA20-201ENST00000516768 MARF1Q9Y4F3 1742 aaKnown RBP15.5■□□□□ 0.07
SCARNA20-201ENST00000516768 ATRNO75882 1429 aa15.5■□□□□ 0.07
SCARNA20-201ENST00000516768 EDC4Q6P2E9 1401 aaKnown RBP15.5■□□□□ 0.07
SCARNA20-201ENST00000516768 CPDO75976 1380 aa15.49■□□□□ 0.07
SCARNA20-201ENST00000516768 USP31Q70CQ4 1352 aa15.49■□□□□ 0.07
SCARNA20-201ENST00000516768 ANKRD36BQ8N2N9 1353 aa15.49■□□□□ 0.07
SCARNA20-201ENST00000516768 AKAP12Q02952 1782 aa15.49■□□□□ 0.07
SCARNA20-201ENST00000516768 ARHGEF25Q86VW2 580 aa15.48■□□□□ 0.07
SCARNA20-201ENST00000516768 CARD14Q9BXL6 1004 aa15.48■□□□□ 0.07
SCARNA20-201ENST00000516768 FYB1O15117 783 aa15.47■□□□□ 0.07
SCARNA20-201ENST00000516768 ONECUT3O60422 494 aaPredicted RBP15.47■□□□□ 0.07
SCARNA20-201ENST00000516768 CRYBG1Q9Y4K1 1723 aa15.47■□□□□ 0.07
SCARNA20-201ENST00000516768 ABCA3Q99758 1704 aa15.46■□□□□ 0.07
SCARNA20-201ENST00000516768 EVA1CP58658 441 aa15.46■□□□□ 0.07
SCARNA20-201ENST00000516768 CDK12Q9NYV4 1490 aaPredicted RBP15.46■□□□□ 0.06
SCARNA20-201ENST00000516768 POLR3GLQ9BT43 218 aa15.45■□□□□ 0.06
SCARNA20-201ENST00000516768 CCDC9Q9Y3X0 531 aaKnown RBP15.45■□□□□ 0.06
SCARNA20-201ENST00000516768 PIK3C2AO00443 1686 aa15.44■□□□□ 0.06
SCARNA20-201ENST00000516768 MON2Q7Z3U7 1717 aa15.44■□□□□ 0.06
SCARNA20-201ENST00000516768 SOX12O15370 315 aa15.44■□□□□ 0.06
SCARNA20-201ENST00000516768 AXIN2Q9Y2T1 843 aa15.44■□□□□ 0.06
SCARNA20-201ENST00000516768 AATKQ6ZMQ8 1374 aa15.44■□□□□ 0.06
SCARNA20-201ENST00000516768 COL14A1Q05707 1796 aaKnown RBP15.44■□□□□ 0.06
SCARNA20-201ENST00000516768 SLIT3O75094 1523 aa15.43■□□□□ 0.06
SCARNA20-201ENST00000516768 COG3Q96JB2 828 aa15.43■□□□□ 0.06
SCARNA20-201ENST00000516768 STRN4Q9NRL3 753 aa15.43■□□□□ 0.06
SCARNA20-201ENST00000516768 PHRF1Q9P1Y6 1649 aaKnown RBP15.43■□□□□ 0.06
SCARNA20-201ENST00000516768 SPATA31A5Q5VU36 1347 aa15.43■□□□□ 0.06
SCARNA20-201ENST00000516768 SPATA31A7Q8IWB4 1347 aa15.43■□□□□ 0.06
SCARNA20-201ENST00000516768 NRKQ7Z2Y5 1582 aa15.42■□□□□ 0.06
SCARNA20-201ENST00000516768 ZBTB7CA1YPR0 619 aa15.42■□□□□ 0.06
SCARNA20-201ENST00000516768 PANK3Q9H999 370 aa15.42■□□□□ 0.06
SCARNA20-201ENST00000516768 NWD2Q9ULI1 1742 aa15.42■□□□□ 0.06
SCARNA20-201ENST00000516768 CAMTA1Q9Y6Y1 1673 aa15.41■□□□□ 0.06
SCARNA20-201ENST00000516768 GGNBP2Q9H3C7 697 aa15.41■□□□□ 0.06
SCARNA20-201ENST00000516768 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.4■□□□□ 0.06
SCARNA20-201ENST00000516768 LARP1Q6PKG0 1096 aaKnown RBP15.4■□□□□ 0.06
SCARNA20-201ENST00000516768 SEPT12Q8IYM1 358 aa15.4■□□□□ 0.06
SCARNA20-201ENST00000516768 KIF7Q2M1P5 1343 aa15.4■□□□□ 0.06
SCARNA20-201ENST00000516768 SPATA31A1Q5TZJ5 1347 aa15.4■□□□□ 0.06
SCARNA20-201ENST00000516768 PLCH1Q4KWH8 1693 aa15.39■□□□□ 0.05
SCARNA20-201ENST00000516768 OVOS2A0A0J9YW53 1432 aa15.39■□□□□ 0.05
SCARNA20-201ENST00000516768 RGS12O14924 1447 aa15.39■□□□□ 0.05
SCARNA20-201ENST00000516768 OVOS2Q6IE36 1432 aa15.39■□□□□ 0.05
SCARNA20-201ENST00000516768 FBLN1P23142 703 aa15.38■□□□□ 0.05
SCARNA20-201ENST00000516768 FAM98CQ17RN3 349 aaKnown RBP15.38■□□□□ 0.05
SCARNA20-201ENST00000516768 BARGINQ6ZT62 677 aa15.37■□□□□ 0.05
SCARNA20-201ENST00000516768 USP35Q9P2H5 1018 aa15.37■□□□□ 0.05
SCARNA20-201ENST00000516768 THRAP3Q9Y2W1 955 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms