RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 PROM2Q8N271 834 aa5.95□□□□□ -1.46
SCARNA13-201ENST00000516672 ADGRL3Q9HAR2 1447 aa5.95□□□□□ -1.46
SCARNA13-201ENST00000516672 COLQQ9Y215 455 aaPredicted RBP5.95□□□□□ -1.46
SCARNA13-201ENST00000516672 VIRMAQ69YN4 1812 aaKnown RBP5.94□□□□□ -1.46
SCARNA13-201ENST00000516672 MAP2K1Q02750 393 aaPredicted RBP5.93□□□□□ -1.46
SCARNA13-201ENST00000516672 KCPQ6ZWJ8 1503 aa5.93□□□□□ -1.46
SCARNA13-201ENST00000516672 NOS1P29475 1434 aa5.92□□□□□ -1.46
SCARNA13-201ENST00000516672 ORAI2Q96SN7 254 aa5.92□□□□□ -1.46
SCARNA13-201ENST00000516672 SYNGAP1Q96PV0 1343 aa5.92□□□□□ -1.46
SCARNA13-201ENST00000516672 PTPN23Q9H3S7 1636 aa5.92□□□□□ -1.46
SCARNA13-201ENST00000516672 NRAPQ86VF7 1730 aa5.91□□□□□ -1.46
SCARNA13-201ENST00000516672 CDC42BPBQ9Y5S2 1711 aa5.91□□□□□ -1.46
SCARNA13-201ENST00000516672 C1orf167Q5SNV9 1468 aa5.91□□□□□ -1.46
SCARNA13-201ENST00000516672 STAG3Q9UJ98 1225 aa5.91□□□□□ -1.46
SCARNA13-201ENST00000516672 TSKSQ9UJT2 592 aa5.91□□□□□ -1.46
SCARNA13-201ENST00000516672 INO80Q9ULG1 1556 aaPredicted RBP5.91□□□□□ -1.46
SCARNA13-201ENST00000516672 VCANP13611 3396 aa5.91□□□□□ -1.46
SCARNA13-201ENST00000516672 SPATA31A5Q5VU36 1347 aa5.91□□□□□ -1.46
SCARNA13-201ENST00000516672 SPATA31A7Q8IWB4 1347 aa5.91□□□□□ -1.46
SCARNA13-201ENST00000516672 KDM2BQ8NHM5 1336 aa5.91□□□□□ -1.46
SCARNA13-201ENST00000516672 TOPAZ1Q8N9V7 1692 aa5.91□□□□□ -1.46
SCARNA13-201ENST00000516672 PIK3C2BO00750 1634 aa5.9□□□□□ -1.46
SCARNA13-201ENST00000516672 KIF3BO15066 747 aa5.9□□□□□ -1.46
SCARNA13-201ENST00000516672 HAP1P54257 671 aaPredicted RBP5.9□□□□□ -1.46
SCARNA13-201ENST00000516672 PDE3BQ13370 1112 aa5.9□□□□□ -1.46
SCARNA13-201ENST00000516672 COL24A1Q17RW2 1714 aa5.9□□□□□ -1.47
SCARNA13-201ENST00000516672 CCDC24Q8N4L8 307 aa5.89□□□□□ -1.47
SCARNA13-201ENST00000516672 ERBB4Q15303 1308 aa5.89□□□□□ -1.47
SCARNA13-201ENST00000516672 TRPM2O94759 1503 aa5.89□□□□□ -1.47
SCARNA13-201ENST00000516672 TNRC6CQ9HCJ0 1690 aaKnown RBP5.88□□□□□ -1.47
SCARNA13-201ENST00000516672 XPCQ01831 940 aaPredicted RBP5.88□□□□□ -1.47
SCARNA13-201ENST00000516672 KCTD2Q14681 263 aa5.88□□□□□ -1.47
SCARNA13-201ENST00000516672 TXNRD1Q16881 649 aa5.88□□□□□ -1.47
SCARNA13-201ENST00000516672 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.88□□□□□ -1.47
SCARNA13-201ENST00000516672 ADGRL2O95490 1459 aa5.88□□□□□ -1.47
SCARNA13-201ENST00000516672 PXDNQ92626 1479 aa5.88□□□□□ -1.47
SCARNA13-201ENST00000516672 LAMB4A4D0S4 1761 aa5.88□□□□□ -1.47
SCARNA13-201ENST00000516672 ALYREFQ86V81 257 aaKnown RBP5.87□□□□□ -1.47
SCARNA13-201ENST00000516672 SLC16A10Q8TF71 515 aa5.87□□□□□ -1.47
SCARNA13-201ENST00000516672 BEGAINQ9BUH8 593 aa5.87□□□□□ -1.47
SCARNA13-201ENST00000516672 BTG4Q9NY30 223 aa5.87□□□□□ -1.47
SCARNA13-201ENST00000516672 TBX22Q9Y458 520 aa5.87□□□□□ -1.47
SCARNA13-201ENST00000516672 TMEM265A0A087WTH1 108 aa5.86□□□□□ -1.47
SCARNA13-201ENST00000516672 MAP3K12Q12852 859 aa5.86□□□□□ -1.47
SCARNA13-201ENST00000516672 AMOTL2Q9Y2J4 779 aa5.86□□□□□ -1.47
SCARNA13-201ENST00000516672 FYCO1Q9BQS8 1478 aa5.85□□□□□ -1.47
SCARNA13-201ENST00000516672 DHX29Q7Z478 1369 aaKnown RBP5.85□□□□□ -1.47
SCARNA13-201ENST00000516672 PLEKHG2Q9H7P9 1386 aa5.85□□□□□ -1.47
SCARNA13-201ENST00000516672 NPHP3Q7Z494 1330 aa5.85□□□□□ -1.47
SCARNA13-201ENST00000516672 PLEKHG5O94827 1062 aa5.85□□□□□ -1.47
SCARNA13-201ENST00000516672 PTF1AQ7RTS3 328 aa5.85□□□□□ -1.47
SCARNA13-201ENST00000516672 P2RX7Q99572 595 aaKnown RBP5.85□□□□□ -1.47
SCARNA13-201ENST00000516672 CD2APQ9Y5K6 639 aa5.85□□□□□ -1.47
SCARNA13-201ENST00000516672 LMTK2Q8IWU2 1503 aa5.84□□□□□ -1.47
SCARNA13-201ENST00000516672 BAHCC1Q9P281 2608 aa5.84□□□□□ -1.47
SCARNA13-201ENST00000516672 PLEKHG1Q9ULL1 1385 aa5.84□□□□□ -1.47
SCARNA13-201ENST00000516672 IGSF1Q8N6C5 1336 aa5.84□□□□□ -1.47
SCARNA13-201ENST00000516672 CACNA1GO43497 2377 aa5.84□□□□□ -1.47
SCARNA13-201ENST00000516672 CABLES1Q8TDN4 633 aa5.84□□□□□ -1.47
SCARNA13-201ENST00000516672 LTBP1Q14766 1721 aa5.83□□□□□ -1.48
SCARNA13-201ENST00000516672 WDR33Q9C0J8 1336 aaKnown RBP5.83□□□□□ -1.48
SCARNA13-201ENST00000516672 ZNF827Q17R98 1081 aa5.83□□□□□ -1.48
SCARNA13-201ENST00000516672 NALCNQ8IZF0 1738 aa5.82□□□□□ -1.48
SCARNA13-201ENST00000516672 C9orf131Q5VYM1 1079 aa5.82□□□□□ -1.48
SCARNA13-201ENST00000516672 CASP8AP2Q9UKL3 1982 aa5.82□□□□□ -1.48
SCARNA13-201ENST00000516672 PTPRUQ92729 1446 aa5.82□□□□□ -1.48
SCARNA13-201ENST00000516672 CFAP65Q6ZU64 1925 aaKnown RBP5.82□□□□□ -1.48
SCARNA13-201ENST00000516672 PIK3R4Q99570 1358 aa5.81□□□□□ -1.48
SCARNA13-201ENST00000516672 PHRF1Q9P1Y6 1649 aaKnown RBP5.81□□□□□ -1.48
SCARNA13-201ENST00000516672 NRXN3Q9Y4C0 1643 aa5.81□□□□□ -1.48
SCARNA13-201ENST00000516672 SPATA31A1Q5TZJ5 1347 aa5.81□□□□□ -1.48
SCARNA13-201ENST00000516672 ZNF777Q9ULD5 760 aaPredicted RBP5.81□□□□□ -1.48
SCARNA13-201ENST00000516672 PKD1L3Q7Z443 1732 aa5.81□□□□□ -1.48
SCARNA13-201ENST00000516672 RRBP1Q9P2E9 1410 aaKnown RBP5.81□□□□□ -1.48
SCARNA13-201ENST00000516672 PAPPAQ13219 1627 aa5.81□□□□□ -1.48
SCARNA13-201ENST00000516672 KIF15Q9NS87 1388 aa5.8□□□□□ -1.48
SCARNA13-201ENST00000516672 KRT37O76014 449 aa5.8□□□□□ -1.48
SCARNA13-201ENST00000516672 VEGFAP15692 232 aaPredicted RBP5.8□□□□□ -1.48
SCARNA13-201ENST00000516672 KRT28Q7Z3Y7 464 aa5.8□□□□□ -1.48
SCARNA13-201ENST00000516672 OTUD5Q96G74 571 aa5.8□□□□□ -1.48
SCARNA13-201ENST00000516672 LRRIQ1Q96JM4 1722 aa5.79□□□□□ -1.48
SCARNA13-201ENST00000516672 DUOX2Q9NRD8 1548 aa5.79□□□□□ -1.48
SCARNA13-201ENST00000516672 SPATA31A3Q5VYP0 1347 aa5.79□□□□□ -1.48
SCARNA13-201ENST00000516672 RASSF10A6NK89 507 aa5.79□□□□□ -1.48
SCARNA13-201ENST00000516672 C11orf95C9JLR9 678 aaPredicted RBP5.79□□□□□ -1.48
SCARNA13-201ENST00000516672 FOXO3O43524 673 aa5.79□□□□□ -1.48
SCARNA13-201ENST00000516672 DEFB115Q30KQ5 88 aa5.79□□□□□ -1.48
SCARNA13-201ENST00000516672 ARHGAP27Q6ZUM4 889 aa5.79□□□□□ -1.48
SCARNA13-201ENST00000516672 STXBP5LQ9Y2K9 1186 aa5.79□□□□□ -1.48
SCARNA13-201ENST00000516672 ADAMTS13Q76LX8 1427 aa5.79□□□□□ -1.48
SCARNA13-201ENST00000516672 ZFHX4Q86UP3 3567 aa5.79□□□□□ -1.48
SCARNA13-201ENST00000516672 FMN2Q9NZ56 1722 aa5.79□□□□□ -1.48
SCARNA13-201ENST00000516672 PNPLA7Q6ZV29 1317 aa5.78□□□□□ -1.48
SCARNA13-201ENST00000516672 PLEKHH2Q8IVE3 1493 aa5.78□□□□□ -1.48
SCARNA13-201ENST00000516672 OVOS2A0A0G2JMS6 1433 aa5.78□□□□□ -1.48
SCARNA13-201ENST00000516672 OVOS2A0A0J9YW53 1432 aa5.78□□□□□ -1.48
SCARNA13-201ENST00000516672 TMEM88BA6NKF7 163 aa5.78□□□□□ -1.48
SCARNA13-201ENST00000516672 TECPR2O15040 1411 aa5.78□□□□□ -1.48
SCARNA13-201ENST00000516672 OVOS2Q6IE36 1432 aa5.78□□□□□ -1.48
SCARNA13-201ENST00000516672 SBF2Q86WG5 1849 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms