RNA–Protein interactions for RNA: ENST00000516414.1

RNU6-1049P-201, Transcript of RNA, U6 small nuclear 1049, pseudogene, humanhuman

BASIC

Gene RNU6-1049P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1049P-201ENST00000516414 PDE4DQ08499 809 aa1.09□□□□□ -2.23
RNU6-1049P-201ENST00000516414 SCARF1Q14162 830 aa1.09□□□□□ -2.23
RNU6-1049P-201ENST00000516414 HIC1Q14526 733 aa1.09□□□□□ -2.23
RNU6-1049P-201ENST00000516414 Q3C1V9 767 aa1.09□□□□□ -2.23
RNU6-1049P-201ENST00000516414 MYSM1Q5VVJ2 828 aa1.09□□□□□ -2.23
RNU6-1049P-201ENST00000516414 RIC3Q7Z5B4 369 aa1.09□□□□□ -2.23
RNU6-1049P-201ENST00000516414 RNF135Q8IUD6 432 aa1.09□□□□□ -2.23
RNU6-1049P-201ENST00000516414 SLF2Q8IX21 1173 aa1.09□□□□□ -2.23
RNU6-1049P-201ENST00000516414 CYP4X1Q8N118 509 aa1.09□□□□□ -2.23
RNU6-1049P-201ENST00000516414 VWA5B2Q8N398 1253 aa1.09□□□□□ -2.23
RNU6-1049P-201ENST00000516414 KCTD17Q8N5Z5 321 aa1.09□□□□□ -2.23
RNU6-1049P-201ENST00000516414 ANKLE1Q8NAG6 615 aa1.09□□□□□ -2.23
RNU6-1049P-201ENST00000516414 INSM2Q96T92 566 aaPredicted RBP1.09□□□□□ -2.23
RNU6-1049P-201ENST00000516414 USB1Q9BQ65 265 aaKnown RBP1.09□□□□□ -2.23
RNU6-1049P-201ENST00000516414 UNC93B1Q9H1C4 597 aa1.09□□□□□ -2.23
RNU6-1049P-201ENST00000516414 USP3Q9Y6I4 520 aa1.09□□□□□ -2.23
RNU6-1049P-201ENST00000516414 SENP3-EIF4A1A0A087X0R7 540 aa1.08□□□□□ -2.24
RNU6-1049P-201ENST00000516414 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP1.08□□□□□ -2.24
RNU6-1049P-201ENST00000516414 SOCS7O14512 581 aa1.08□□□□□ -2.24
RNU6-1049P-201ENST00000516414 TERTO14746 1132 aaKnown RBP1.08□□□□□ -2.24
RNU6-1049P-201ENST00000516414 CAPN5O15484 640 aaPredicted RBP1.08□□□□□ -2.24
RNU6-1049P-201ENST00000516414 GIGYF1O75420 1035 aaPredicted RBP1.08□□□□□ -2.24
RNU6-1049P-201ENST00000516414 FMNL1O95466 1100 aaPredicted RBP1.08□□□□□ -2.24
RNU6-1049P-201ENST00000516414 ITGB7P26010 798 aa1.08□□□□□ -2.24
RNU6-1049P-201ENST00000516414 PHKA2P46019 1235 aa1.08□□□□□ -2.24
RNU6-1049P-201ENST00000516414 HDGFP51858 240 aaKnown RBP1.08□□□□□ -2.24
RNU6-1049P-201ENST00000516414 WDR4P57081 412 aaKnown RBP1.08□□□□□ -2.24
RNU6-1049P-201ENST00000516414 RELBQ01201 579 aa1.08□□□□□ -2.24
RNU6-1049P-201ENST00000516414 MAP2K5Q13163 448 aa1.08□□□□□ -2.24
RNU6-1049P-201ENST00000516414 NNTQ13423 1086 aa1.08□□□□□ -2.24
RNU6-1049P-201ENST00000516414 TTLL12Q14166 644 aaPredicted RBP1.08□□□□□ -2.24
RNU6-1049P-201ENST00000516414 TBCELQ5QJ74 424 aa1.08□□□□□ -2.24
RNU6-1049P-201ENST00000516414 SH3PXD2AQ5TCZ1 1133 aa1.08□□□□□ -2.24
RNU6-1049P-201ENST00000516414 RSBN1LQ6PCB5 846 aaPredicted RBP1.08□□□□□ -2.24
RNU6-1049P-201ENST00000516414 POM121Q96HA1 1249 aa1.08□□□□□ -2.24
RNU6-1049P-201ENST00000516414 KCNH8Q96L42 1107 aa1.08□□□□□ -2.24
RNU6-1049P-201ENST00000516414 CNTNAP3BQ96NU0 1288 aa1.08□□□□□ -2.24
RNU6-1049P-201ENST00000516414 NUDT12Q9BQG2 462 aa1.08□□□□□ -2.24
RNU6-1049P-201ENST00000516414 TRIM34Q9BYJ4 488 aa1.08□□□□□ -2.24
RNU6-1049P-201ENST00000516414 CNTNAP3Q9BZ76 1288 aa1.08□□□□□ -2.24
RNU6-1049P-201ENST00000516414 RAB6BQ9NRW1 208 aa1.08□□□□□ -2.24
RNU6-1049P-201ENST00000516414 EVA1BQ9NVM1 165 aa1.08□□□□□ -2.24
RNU6-1049P-201ENST00000516414 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP1.08□□□□□ -2.24
RNU6-1049P-201ENST00000516414 V9GY48 417 aaPredicted RBP1.08□□□□□ -2.24
RNU6-1049P-201ENST00000516414 CNTNAP5Q8WYK1 1306 aa1.08□□□□□ -2.24
RNU6-1049P-201ENST00000516414 PIK3CDO00329 1044 aa1.07□□□□□ -2.24
RNU6-1049P-201ENST00000516414 WNT7AO00755 349 aa1.07□□□□□ -2.24
RNU6-1049P-201ENST00000516414 C2CD2LO14523 706 aa1.07□□□□□ -2.24
RNU6-1049P-201ENST00000516414 LILRA1O75019 489 aa1.07□□□□□ -2.24
RNU6-1049P-201ENST00000516414 LILRB3O75022 631 aa1.07□□□□□ -2.24
RNU6-1049P-201ENST00000516414 PPFIA3O75145 1194 aa1.07□□□□□ -2.24
RNU6-1049P-201ENST00000516414 NR1I2O75469 434 aa1.07□□□□□ -2.24
RNU6-1049P-201ENST00000516414 ZIC2O95409 532 aaPredicted RBP1.07□□□□□ -2.24
RNU6-1049P-201ENST00000516414 F12P00748 615 aaPredicted RBP1.07□□□□□ -2.24
RNU6-1049P-201ENST00000516414 AVPP01185 164 aa1.07□□□□□ -2.24
RNU6-1049P-201ENST00000516414 OATP04181 439 aa1.07□□□□□ -2.24
RNU6-1049P-201ENST00000516414 JUNDP17535 347 aa1.07□□□□□ -2.24
RNU6-1049P-201ENST00000516414 SNRPNP63162 240 aaKnown RBP1.07□□□□□ -2.24
RNU6-1049P-201ENST00000516414 PLAURQ03405 335 aa1.07□□□□□ -2.24
RNU6-1049P-201ENST00000516414 KCNH2Q12809 1159 aa1.07□□□□□ -2.24
RNU6-1049P-201ENST00000516414 DBN1Q16643 649 aa1.07□□□□□ -2.24
RNU6-1049P-201ENST00000516414 CDCA8Q53HL2 280 aa1.07□□□□□ -2.24
RNU6-1049P-201ENST00000516414 LYPD4Q6UWN0 246 aa1.07□□□□□ -2.24
RNU6-1049P-201ENST00000516414 LYPD8Q6UX82 237 aa1.07□□□□□ -2.24
RNU6-1049P-201ENST00000516414 C8orf86Q6ZUL3 223 aa1.07□□□□□ -2.24
RNU6-1049P-201ENST00000516414 PRICKLE2Q7Z3G6 844 aa1.07□□□□□ -2.24
RNU6-1049P-201ENST00000516414 SH3RF1Q7Z6J0 888 aa1.07□□□□□ -2.24
RNU6-1049P-201ENST00000516414 EHBP1Q8NDI1 1231 aa1.07□□□□□ -2.24
RNU6-1049P-201ENST00000516414 SNIP1Q8TAD8 396 aaKnown RBP1.07□□□□□ -2.24
RNU6-1049P-201ENST00000516414 SUV39H2Q9H5I1 410 aa1.07□□□□□ -2.24
RNU6-1049P-201ENST00000516414 PARP3Q9Y6F1 533 aa1.07□□□□□ -2.24
RNU6-1049P-201ENST00000516414 LOC100996750A0A140TA64 210 aa1.06□□□□□ -2.24
RNU6-1049P-201ENST00000516414 NUTM2BA6NNL0 878 aaPredicted RBP1.06□□□□□ -2.24
RNU6-1049P-201ENST00000516414 POM121CA8CG34 1229 aa1.06□□□□□ -2.24
RNU6-1049P-201ENST00000516414 NUTM2EB1AL46 878 aaPredicted RBP1.06□□□□□ -2.24
RNU6-1049P-201ENST00000516414 ERVH48-1M5A8F1 160 aa1.06□□□□□ -2.24
RNU6-1049P-201ENST00000516414 SPTLC1O15269 473 aa1.06□□□□□ -2.24
RNU6-1049P-201ENST00000516414 AP1G2O75843 785 aa1.06□□□□□ -2.24
RNU6-1049P-201ENST00000516414 DGAT1O75907 488 aa1.06□□□□□ -2.24
RNU6-1049P-201ENST00000516414 CD2BP2O95400 341 aaKnown RBP1.06□□□□□ -2.24
RNU6-1049P-201ENST00000516414 PRR20EP86478 221 aa1.06□□□□□ -2.24
RNU6-1049P-201ENST00000516414 PRR20CP86479 221 aa1.06□□□□□ -2.24
RNU6-1049P-201ENST00000516414 PRR20DP86480 221 aa1.06□□□□□ -2.24
RNU6-1049P-201ENST00000516414 PRR20BP86481 221 aa1.06□□□□□ -2.24
RNU6-1049P-201ENST00000516414 PRR20AP86496 221 aa1.06□□□□□ -2.24
RNU6-1049P-201ENST00000516414 POU4F2Q12837 409 aa1.06□□□□□ -2.24
RNU6-1049P-201ENST00000516414 GAS6Q14393 721 aa1.06□□□□□ -2.24
RNU6-1049P-201ENST00000516414 SUZ12Q15022 739 aaKnown RBP1.06□□□□□ -2.24
RNU6-1049P-201ENST00000516414 KMT5BQ4FZB7 885 aa1.06□□□□□ -2.24
RNU6-1049P-201ENST00000516414 ERFEQ4G0M1 354 aa1.06□□□□□ -2.24
RNU6-1049P-201ENST00000516414 TPRNQ4KMQ1 711 aa1.06□□□□□ -2.24
RNU6-1049P-201ENST00000516414 FAM26DQ5JW98 314 aa1.06□□□□□ -2.24
RNU6-1049P-201ENST00000516414 PPP1R26Q5T8A7 1209 aaPredicted RBP1.06□□□□□ -2.24
RNU6-1049P-201ENST00000516414 NUTM2DQ5VT03 806 aaPredicted RBP1.06□□□□□ -2.24
RNU6-1049P-201ENST00000516414 FOXD4L5Q5VV16 416 aaPredicted RBP1.06□□□□□ -2.24
RNU6-1049P-201ENST00000516414 ADAMTSL4Q6UY14 1074 aa1.06□□□□□ -2.24
RNU6-1049P-201ENST00000516414 CAPN12Q6ZSI9 719 aa1.06□□□□□ -2.24
RNU6-1049P-201ENST00000516414 NUTM1Q86Y26 1132 aa1.06□□□□□ -2.24
RNU6-1049P-201ENST00000516414 NUTM2AQ8IVF1 878 aaPredicted RBP1.06□□□□□ -2.24
RNU6-1049P-201ENST00000516414 ZNF511Q8NB15 262 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms