RNA–Protein interactions for RNA: ENST00000515829.6

SMG7-215, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMG7, Length 5,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-215ENST00000515829 FKBP5Q13451 457 aaPredicted RBP12.53□□□□□ -0.4
SMG7-215ENST00000515829 DCTN1Q14203 1278 aa12.53□□□□□ -0.4
SMG7-215ENST00000515829 NUP160Q12769 1436 aa12.53□□□□□ -0.4
SMG7-215ENST00000515829 XRCC6P12956 609 aaKnown RBP eCLIP12.53□□□□□ -0.4
SMG7-215ENST00000515829 RRS1Q15050 365 aaKnown RBP12.53□□□□□ -0.4
SMG7-215ENST00000515829 NEK4P51957 841 aa12.52□□□□□ -0.4
SMG7-215ENST00000515829 NRDCO43847 1150 aa12.52□□□□□ -0.41
SMG7-215ENST00000515829 PBRM1Q86U86 1689 aa12.52□□□□□ -0.41
SMG7-215ENST00000515829 PIK3C2GO75747 1445 aa12.52□□□□□ -0.41
SMG7-215ENST00000515829 CHAF1AQ13111 956 aaPredicted RBP12.52□□□□□ -0.41
SMG7-215ENST00000515829 R3HCC1Q9Y3T6 440 aaKnown RBP12.52□□□□□ -0.41
SMG7-215ENST00000515829 TRAPPC8Q9Y2L5 1435 aa12.52□□□□□ -0.41
SMG7-215ENST00000515829 TSPYL4Q9UJ04 414 aa12.51□□□□□ -0.41
SMG7-215ENST00000515829 EIF2S2P20042 333 aaKnown RBP12.51□□□□□ -0.41
SMG7-215ENST00000515829 RABEP1Q15276 862 aa12.51□□□□□ -0.41
SMG7-215ENST00000515829 HDAC5Q9UQL6 1122 aa12.51□□□□□ -0.41
SMG7-215ENST00000515829 SSFA2P28290 1259 aa12.51□□□□□ -0.41
SMG7-215ENST00000515829 FCHSD2O94868 740 aa12.51□□□□□ -0.41
SMG7-215ENST00000515829 MPNDQ8N594 471 aa12.51□□□□□ -0.41
SMG7-215ENST00000515829 MBD5Q9P267 1494 aa12.5□□□□□ -0.41
SMG7-215ENST00000515829 C14orf93Q9H972 538 aaKnown RBP12.5□□□□□ -0.41
SMG7-215ENST00000515829 SULT6B1Q6IMI4 303 aa12.5□□□□□ -0.41
SMG7-215ENST00000515829 CHMP3Q9Y3E7 222 aa12.5□□□□□ -0.41
SMG7-215ENST00000515829 SMARCA5O60264 1052 aaPredicted RBP12.49□□□□□ -0.41
SMG7-215ENST00000515829 TXNDC2Q86VQ3 553 aa12.49□□□□□ -0.41
SMG7-215ENST00000515829 MAGI2Q86UL8 1455 aa12.49□□□□□ -0.41
SMG7-215ENST00000515829 SLC4A2P04920 1241 aa12.49□□□□□ -0.41
SMG7-215ENST00000515829 WAPLQ7Z5K2 1190 aa12.49□□□□□ -0.41
SMG7-215ENST00000515829 NFE2L2Q16236 605 aa12.49□□□□□ -0.41
SMG7-215ENST00000515829 POLR3AO14802 1390 aaPredicted RBP12.49□□□□□ -0.41
SMG7-215ENST00000515829 TARBP1Q13395 1621 aaKnown RBP12.48□□□□□ -0.41
SMG7-215ENST00000515829 RBM10P98175 930 aaKnown RBP12.48□□□□□ -0.41
SMG7-215ENST00000515829 RBM42Q9BTD8 480 aaKnown RBP12.48□□□□□ -0.41
SMG7-215ENST00000515829 CIZ1Q9ULV3 898 aaPredicted RBP12.48□□□□□ -0.41
SMG7-215ENST00000515829 EMILIN1Q9Y6C2 1016 aa12.48□□□□□ -0.41
SMG7-215ENST00000515829 DUOX2Q9NRD8 1548 aa12.48□□□□□ -0.41
SMG7-215ENST00000515829 PHF14O94880 888 aa12.48□□□□□ -0.41
SMG7-215ENST00000515829 TBC1D9Q6ZT07 1266 aa12.48□□□□□ -0.41
SMG7-215ENST00000515829 RPGRIP1LQ68CZ1 1315 aa12.47□□□□□ -0.41
SMG7-215ENST00000515829 MIS18AQ9NYP9 233 aa12.47□□□□□ -0.41
SMG7-215ENST00000515829 NPHP1O15259 732 aa12.47□□□□□ -0.41
SMG7-215ENST00000515829 CCDC173Q0VFZ6 552 aa12.47□□□□□ -0.41
SMG7-215ENST00000515829 TRHP20396 242 aaPredicted RBP12.47□□□□□ -0.41
SMG7-215ENST00000515829 HDAC1Q13547 482 aaPredicted RBP12.47□□□□□ -0.41
SMG7-215ENST00000515829 NUTM2GQ5VZR2 741 aa12.46□□□□□ -0.41
SMG7-215ENST00000515829 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.46□□□□□ -0.41
SMG7-215ENST00000515829 IDI1Q13907 227 aa12.46□□□□□ -0.41
SMG7-215ENST00000515829 PLCH2O75038 1416 aa12.46□□□□□ -0.41
SMG7-215ENST00000515829 ADGRL1O94910 1474 aa12.46□□□□□ -0.42
SMG7-215ENST00000515829 EIF2AK4Q9P2K8 1649 aaKnown RBP12.46□□□□□ -0.42
SMG7-215ENST00000515829 FAM83GA6ND36 823 aa12.46□□□□□ -0.42
SMG7-215ENST00000515829 ALDH1L2Q3SY69 923 aa12.46□□□□□ -0.42
SMG7-215ENST00000515829 CYB5RLQ6IPT4 315 aa12.46□□□□□ -0.42
SMG7-215ENST00000515829 EID1Q9Y6B2 187 aa12.45□□□□□ -0.42
SMG7-215ENST00000515829 NUCB1Q02818 461 aa12.45□□□□□ -0.42
SMG7-215ENST00000515829 MCM10Q7L590 875 aa12.45□□□□□ -0.42
SMG7-215ENST00000515829 EIF4G3O43432 1585 aaKnown RBP12.45□□□□□ -0.42
SMG7-215ENST00000515829 ADGBQ8N7X0 1667 aa12.45□□□□□ -0.42
SMG7-215ENST00000515829 ZNF521Q96K83 1311 aa12.45□□□□□ -0.42
SMG7-215ENST00000515829 NME9Q86XW9 330 aa12.45□□□□□ -0.42
SMG7-215ENST00000515829 RRAGDQ9NQL2 400 aaPredicted RBP12.45□□□□□ -0.42
SMG7-215ENST00000515829 ATAD2Q6PL18 1390 aa12.44□□□□□ -0.42
SMG7-215ENST00000515829 FYB1O15117 783 aa12.44□□□□□ -0.42
SMG7-215ENST00000515829 BMP2KLQ5H9B9 411 aa12.44□□□□□ -0.42
SMG7-215ENST00000515829 ISY1Q9ULR0 285 aaKnown RBP12.44□□□□□ -0.42
SMG7-215ENST00000515829 CCDC9Q9Y3X0 531 aaKnown RBP12.44□□□□□ -0.42
SMG7-215ENST00000515829 CCDC27Q2M243 656 aa12.44□□□□□ -0.42
SMG7-215ENST00000515829 DIAPH3Q9NSV4 1193 aa12.44□□□□□ -0.42
SMG7-215ENST00000515829 ERC2O15083 957 aa12.44□□□□□ -0.42
SMG7-215ENST00000515829 LRRIQ1Q96JM4 1722 aa12.44□□□□□ -0.42
SMG7-215ENST00000515829 MAP4K4O95819 1239 aaPredicted RBP12.43□□□□□ -0.42
SMG7-215ENST00000515829 SLC52A1Q9NWF4 448 aa12.43□□□□□ -0.42
SMG7-215ENST00000515829 EXOC6BQ9Y2D4 811 aa12.43□□□□□ -0.42
SMG7-215ENST00000515829 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.43□□□□□ -0.42
SMG7-215ENST00000515829 VPS37CA5D8V6 355 aaPredicted RBP12.43□□□□□ -0.42
SMG7-215ENST00000515829 INSRP06213 1382 aa12.43□□□□□ -0.42
SMG7-215ENST00000515829 TRMT2AQ8IZ69 625 aaKnown RBP12.43□□□□□ -0.42
SMG7-215ENST00000515829 FANCAO15360 1455 aa12.42□□□□□ -0.42
SMG7-215ENST00000515829 ZNF428Q96B54 188 aa12.42□□□□□ -0.42
SMG7-215ENST00000515829 ABCC11Q96J66 1382 aa12.42□□□□□ -0.42
SMG7-215ENST00000515829 HSP90B1P14625 803 aaKnown RBP12.42□□□□□ -0.42
SMG7-215ENST00000515829 GPATCH3Q96I76 525 aa12.42□□□□□ -0.42
SMG7-215ENST00000515829 MBIPQ9NS73 344 aa12.42□□□□□ -0.42
SMG7-215ENST00000515829 ABCC10Q5T3U5 1492 aa12.42□□□□□ -0.42
SMG7-215ENST00000515829 OSCARQ8IYS5 282 aa12.42□□□□□ -0.42
SMG7-215ENST00000515829 TSPYL6Q8N831 410 aa12.42□□□□□ -0.42
SMG7-215ENST00000515829 SYCE3A1L190 88 aa12.41□□□□□ -0.42
SMG7-215ENST00000515829 SURF6O75683 361 aaKnown RBP12.41□□□□□ -0.42
SMG7-215ENST00000515829 FBXO31Q5XUX0 539 aaPredicted RBP12.41□□□□□ -0.42
SMG7-215ENST00000515829 ZBTB40Q9NUA8 1239 aa12.41□□□□□ -0.42
SMG7-215ENST00000515829 SMC3Q9UQE7 1217 aa12.41□□□□□ -0.42
SMG7-215ENST00000515829 RTEL1-TNFRSF6BF6WH68 1400 aa12.41□□□□□ -0.42
SMG7-215ENST00000515829 F6X3S4 739 aa12.41□□□□□ -0.42
SMG7-215ENST00000515829 UBTFL1P0CB47 393 aaPredicted RBP12.41□□□□□ -0.42
SMG7-215ENST00000515829 CEP170Q5SW79 1584 aa12.41□□□□□ -0.42
SMG7-215ENST00000515829 C16orf71Q8IYS4 520 aaPredicted RBP12.41□□□□□ -0.42
SMG7-215ENST00000515829 GNAI2P04899 355 aa12.41□□□□□ -0.42
SMG7-215ENST00000515829 SMC5Q8IY18 1101 aa12.41□□□□□ -0.42
SMG7-215ENST00000515829 CWC22Q9HCG8 908 aaKnown RBP12.41□□□□□ -0.42
SMG7-215ENST00000515829 IFT57Q9NWB7 429 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms