RNA–Protein interactions for RNA: ENST00000515795.1

FAM20C-205, Transcript of FAM20C, golgi associated secretory pathway kinase, humanhuman

TSL 1 (best)

Gene FAM20C, Length 2,177 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM20C-205ENST00000515795 AAMPQ13685 434 aa25.89■■□□□ 1.73
FAM20C-205ENST00000515795 SPATA31D1Q6ZQQ2 1576 aa25.89■■□□□ 1.73
FAM20C-205ENST00000515795 RIMS2Q9UQ26 1411 aa25.88■■□□□ 1.73
FAM20C-205ENST00000515795 RTL5Q5HYW3 569 aaPredicted RBP25.88■■□□□ 1.73
FAM20C-205ENST00000515795 TNNQ9UQP3 1299 aa25.88■■□□□ 1.73
FAM20C-205ENST00000515795 WAPLQ7Z5K2 1190 aa25.88■■□□□ 1.73
FAM20C-205ENST00000515795 DIAPH1O60610 1272 aaKnown RBP25.86■■□□□ 1.73
FAM20C-205ENST00000515795 DEKP35659 375 aaKnown RBP25.86■■□□□ 1.73
FAM20C-205ENST00000515795 DLC1Q96QB1 1528 aa25.86■■□□□ 1.73
FAM20C-205ENST00000515795 TSR2Q969E8 191 aaKnown RBP25.86■■□□□ 1.73
FAM20C-205ENST00000515795 TRIM35Q9UPQ4 493 aa25.85■■□□□ 1.73
FAM20C-205ENST00000515795 KIF20BQ96Q89 1820 aa25.85■■□□□ 1.73
FAM20C-205ENST00000515795 LAS1LQ9Y4W2 734 aaKnown RBP25.85■■□□□ 1.73
FAM20C-205ENST00000515795 PMFBP1Q8TBY8 1022 aa25.84■■□□□ 1.73
FAM20C-205ENST00000515795 CT47B1P0C2W7 299 aaPredicted RBP25.83■■□□□ 1.73
FAM20C-205ENST00000515795 PNPLA6Q8IY17 1366 aa25.83■■□□□ 1.73
FAM20C-205ENST00000515795 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.82■■□□□ 1.72
FAM20C-205ENST00000515795 PNNQ9H307 717 aaKnown RBP25.82■■□□□ 1.72
FAM20C-205ENST00000515795 SETD1AO15047 1707 aaKnown RBP25.81■■□□□ 1.72
FAM20C-205ENST00000515795 EXOSC9Q06265 439 aaKnown RBP25.81■■□□□ 1.72
FAM20C-205ENST00000515795 PCDHB15Q9Y5E8 787 aa25.81■■□□□ 1.72
FAM20C-205ENST00000515795 ZKSCAN2Q63HK3 967 aa25.8■■□□□ 1.72
FAM20C-205ENST00000515795 RIPK4P57078 832 aa25.8■■□□□ 1.72
FAM20C-205ENST00000515795 ATP7BP35670 1465 aa25.8■■□□□ 1.72
FAM20C-205ENST00000515795 IL16Q14005 1332 aa25.78■■□□□ 1.72
FAM20C-205ENST00000515795 PPM1GO15355 546 aaPredicted RBP25.77■■□□□ 1.72
FAM20C-205ENST00000515795 MVPQ14764 893 aaKnown RBP25.77■■□□□ 1.72
FAM20C-205ENST00000515795 FTSJ3Q8IY81 847 aaKnown RBP25.77■■□□□ 1.72
FAM20C-205ENST00000515795 SMC4Q9NTJ3 1288 aa25.77■■□□□ 1.72
FAM20C-205ENST00000515795 DAXXQ9UER7 740 aaPredicted RBP25.77■■□□□ 1.72
FAM20C-205ENST00000515795 DZIP1LQ8IYY4 767 aaKnown RBP25.76■■□□□ 1.71
FAM20C-205ENST00000515795 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.76■■□□□ 1.71
FAM20C-205ENST00000515795 ESF1Q9H501 851 aaKnown RBP25.76■■□□□ 1.71
FAM20C-205ENST00000515795 FCHSD2O94868 740 aa25.75■■□□□ 1.71
FAM20C-205ENST00000515795 POLKQ9UBT6 870 aa25.75■■□□□ 1.71
FAM20C-205ENST00000515795 FBLN1P23142 703 aa25.75■■□□□ 1.71
FAM20C-205ENST00000515795 RWDD1Q9H446 243 aaPredicted RBP25.75■■□□□ 1.71
FAM20C-205ENST00000515795 SLC4A3P48751 1232 aa25.74■■□□□ 1.71
FAM20C-205ENST00000515795 WASLO00401 505 aaPredicted RBP25.73■■□□□ 1.71
FAM20C-205ENST00000515795 NEFMP07197 916 aa25.73■■□□□ 1.71
FAM20C-205ENST00000515795 VIRMAQ69YN4 1812 aaKnown RBP25.73■■□□□ 1.71
FAM20C-205ENST00000515795 NRXN3Q9Y4C0 1643 aa25.73■■□□□ 1.71
FAM20C-205ENST00000515795 SSH1Q8WYL5 1049 aa25.73■■□□□ 1.71
FAM20C-205ENST00000515795 METP08581 1390 aa25.73■■□□□ 1.71
FAM20C-205ENST00000515795 CDC42BPGQ6DT37 1551 aa25.72■■□□□ 1.71
FAM20C-205ENST00000515795 ZMYM3Q14202 1370 aa25.72■■□□□ 1.71
FAM20C-205ENST00000515795 PPIP5K1Q6PFW1 1433 aa25.71■■□□□ 1.71
FAM20C-205ENST00000515795 TXNDC2Q86VQ3 553 aa25.71■■□□□ 1.71
FAM20C-205ENST00000515795 LRRC7Q96NW7 1537 aa25.71■■□□□ 1.71
FAM20C-205ENST00000515795 USP35Q9P2H5 1018 aa25.71■■□□□ 1.71
FAM20C-205ENST00000515795 PRKAR2BP31323 418 aa25.7■■□□□ 1.7
FAM20C-205ENST00000515795 RSPH6AQ9H0K4 717 aa25.7■■□□□ 1.7
FAM20C-205ENST00000515795 CPSF1Q10570 1443 aaKnown RBP25.7■■□□□ 1.7
FAM20C-205ENST00000515795 TRIM27P14373 513 aa25.69■■□□□ 1.7
FAM20C-205ENST00000515795 PDZRN3Q9UPQ7 1066 aa25.69■■□□□ 1.7
FAM20C-205ENST00000515795 EDC4Q6P2E9 1401 aaKnown RBP25.69■■□□□ 1.7
FAM20C-205ENST00000515795 MAP2P11137 1827 aaKnown RBP25.68■■□□□ 1.7
FAM20C-205ENST00000515795 FAM135BQ49AJ0 1406 aa25.67■■□□□ 1.7
FAM20C-205ENST00000515795 ATF7IPQ6VMQ6 1270 aa25.67■■□□□ 1.7
FAM20C-205ENST00000515795 BCL11AQ9H165 835 aa25.67■■□□□ 1.7
FAM20C-205ENST00000515795 HDGFP51858 240 aaKnown RBP25.66■■□□□ 1.7
FAM20C-205ENST00000515795 NME9Q86XW9 330 aa25.66■■□□□ 1.7
FAM20C-205ENST00000515795 NOB1Q9ULX3 412 aaKnown RBP25.66■■□□□ 1.7
FAM20C-205ENST00000515795 NUDT16Q96DE0 195 aaKnown RBP25.66■■□□□ 1.7
FAM20C-205ENST00000515795 EMILIN1Q9Y6C2 1016 aa25.65■■□□□ 1.7
FAM20C-205ENST00000515795 ITPRIPQ8IWB1 547 aa25.65■■□□□ 1.7
FAM20C-205ENST00000515795 SEC24BO95487 1268 aa25.64■■□□□ 1.7
FAM20C-205ENST00000515795 HMOX1P09601 288 aa25.64■■□□□ 1.7
FAM20C-205ENST00000515795 DDX19BQ9UMR2 479 aa25.64■■□□□ 1.7
FAM20C-205ENST00000515795 USP19O94966 1318 aa25.64■■□□□ 1.69
FAM20C-205ENST00000515795 ZRANB1Q9UGI0 708 aa25.63■■□□□ 1.69
FAM20C-205ENST00000515795 SIRT1Q96EB6 747 aa25.62■■□□□ 1.69
FAM20C-205ENST00000515795 PHACTR3Q96KR7 559 aa25.62■■□□□ 1.69
FAM20C-205ENST00000515795 CCDC61Q9Y6R9 512 aa25.62■■□□□ 1.69
FAM20C-205ENST00000515795 NCKAP5LQ9HCH0 1330 aa25.62■■□□□ 1.69
FAM20C-205ENST00000515795 NFE2L2Q16236 605 aa25.62■■□□□ 1.69
FAM20C-205ENST00000515795 KIF13AQ9H1H9 1805 aa25.62■■□□□ 1.69
FAM20C-205ENST00000515795 KIF16BQ96L93 1317 aa25.62■■□□□ 1.69
FAM20C-205ENST00000515795 IPO8O15397 1037 aaKnown RBP25.61■■□□□ 1.69
FAM20C-205ENST00000515795 TNRQ92752 1358 aa25.61■■□□□ 1.69
FAM20C-205ENST00000515795 KNDC1Q76NI1 1749 aa25.61■■□□□ 1.69
FAM20C-205ENST00000515795 IL13P35225 146 aa25.61■■□□□ 1.69
FAM20C-205ENST00000515795 TECPR2O15040 1411 aa25.6■■□□□ 1.69
FAM20C-205ENST00000515795 ALDH1L2Q3SY69 923 aa25.6■■□□□ 1.69
FAM20C-205ENST00000515795 COG3Q96JB2 828 aa25.6■■□□□ 1.69
FAM20C-205ENST00000515795 CDK12Q9NYV4 1490 aaPredicted RBP25.59■■□□□ 1.69
FAM20C-205ENST00000515795 TMEM57Q8N5G2 664 aa25.59■■□□□ 1.69
FAM20C-205ENST00000515795 AATKQ6ZMQ8 1374 aa25.59■■□□□ 1.69
FAM20C-205ENST00000515795 HDAC1Q13547 482 aaPredicted RBP25.58■■□□□ 1.68
FAM20C-205ENST00000515795 CPS1P31327 1500 aa25.57■■□□□ 1.68
FAM20C-205ENST00000515795 CALD1Q05682 793 aaKnown RBP25.56■■□□□ 1.68
FAM20C-205ENST00000515795 MON2Q7Z3U7 1717 aa25.56■■□□□ 1.68
FAM20C-205ENST00000515795 TMEM2Q9UHN6 1383 aa25.56■■□□□ 1.68
FAM20C-205ENST00000515795 THUMPD2Q9BTF0 503 aaKnown RBP25.55■■□□□ 1.68
FAM20C-205ENST00000515795 RRS1Q15050 365 aaKnown RBP25.55■■□□□ 1.68
FAM20C-205ENST00000515795 ZNF428Q96B54 188 aa25.55■■□□□ 1.68
FAM20C-205ENST00000515795 NFKBIBQ15653 356 aa25.54■■□□□ 1.68
FAM20C-205ENST00000515795 ZNF692Q9BU19 519 aaPredicted RBP25.54■■□□□ 1.68
FAM20C-205ENST00000515795 ZBTB40Q9NUA8 1239 aa25.54■■□□□ 1.68
FAM20C-205ENST00000515795 UPF2Q9HAU5 1272 aaKnown RBP25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms