RNA–Protein interactions for RNA: ENST00000515587.1

PDCD6-211, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 855 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-211ENST00000515587 NINLQ9Y2I6 1382 aa20.96■□□□□ 0.95
PDCD6-211ENST00000515587 POLR3GLQ9BT43 218 aa20.95■□□□□ 0.94
PDCD6-211ENST00000515587 ACEP12821 1306 aa20.95■□□□□ 0.94
PDCD6-211ENST00000515587 KRT28Q7Z3Y7 464 aa20.94■□□□□ 0.94
PDCD6-211ENST00000515587 POLR3AO14802 1390 aaPredicted RBP20.94■□□□□ 0.94
PDCD6-211ENST00000515587 AKAP12Q02952 1782 aa20.93■□□□□ 0.94
PDCD6-211ENST00000515587 PXDNQ92626 1479 aa20.93■□□□□ 0.94
PDCD6-211ENST00000515587 XPCQ01831 940 aaPredicted RBP20.92■□□□□ 0.94
PDCD6-211ENST00000515587 SOS2Q07890 1332 aaPredicted RBP20.92■□□□□ 0.94
PDCD6-211ENST00000515587 HDGFL2Q7Z4V5 671 aaPredicted RBP20.91■□□□□ 0.94
PDCD6-211ENST00000515587 TERF2IPQ9NYB0 399 aa20.91■□□□□ 0.94
PDCD6-211ENST00000515587 USP21Q9UK80 565 aa20.91■□□□□ 0.94
PDCD6-211ENST00000515587 ZNF692Q9BU19 519 aaPredicted RBP20.9■□□□□ 0.94
PDCD6-211ENST00000515587 SLC12A5Q9H2X9 1139 aa20.9■□□□□ 0.94
PDCD6-211ENST00000515587 MYOM1P52179 1685 aa20.89■□□□□ 0.94
PDCD6-211ENST00000515587 TRPC5Q9UL62 973 aaPredicted RBP20.89■□□□□ 0.93
PDCD6-211ENST00000515587 TRPM3Q9HCF6 1732 aaPredicted RBP20.89■□□□□ 0.93
PDCD6-211ENST00000515587 SBNO1A3KN83 1393 aa20.88■□□□□ 0.93
PDCD6-211ENST00000515587 PAK3O75914 559 aaPredicted RBP20.88■□□□□ 0.93
PDCD6-211ENST00000515587 MON2Q7Z3U7 1717 aa20.87■□□□□ 0.93
PDCD6-211ENST00000515587 BRD4O60885 1362 aaPredicted RBP20.87■□□□□ 0.93
PDCD6-211ENST00000515587 KTN1Q86UP2 1357 aaKnown RBP20.87■□□□□ 0.93
PDCD6-211ENST00000515587 CCDC125Q86Z20 511 aa20.87■□□□□ 0.93
PDCD6-211ENST00000515587 KIF7Q2M1P5 1343 aa20.86■□□□□ 0.93
PDCD6-211ENST00000515587 C11orf95C9JLR9 678 aaPredicted RBP20.86■□□□□ 0.93
PDCD6-211ENST00000515587 USP6P35125 1406 aa20.86■□□□□ 0.93
PDCD6-211ENST00000515587 CPSF1Q10570 1443 aaKnown RBP20.86■□□□□ 0.93
PDCD6-211ENST00000515587 TNS3Q68CZ2 1445 aa20.86■□□□□ 0.93
PDCD6-211ENST00000515587 LMOD2Q6P5Q4 547 aa20.85■□□□□ 0.93
PDCD6-211ENST00000515587 ANKRD36BQ8N2N9 1353 aa20.85■□□□□ 0.93
PDCD6-211ENST00000515587 SPATA31A3Q5VYP0 1347 aa20.84■□□□□ 0.93
PDCD6-211ENST00000515587 EP400Q96L91 3159 aa20.84■□□□□ 0.93
PDCD6-211ENST00000515587 CD163L1Q9NR16 1453 aa20.84■□□□□ 0.93
PDCD6-211ENST00000515587 FNBP4Q8N3X1 1017 aaPredicted RBP20.84■□□□□ 0.93
PDCD6-211ENST00000515587 ATRNO75882 1429 aa20.84■□□□□ 0.93
PDCD6-211ENST00000515587 A0A1W2PP64 1363 aa20.84■□□□□ 0.93
PDCD6-211ENST00000515587 ARHGEF10O15013 1369 aa20.84■□□□□ 0.93
PDCD6-211ENST00000515587 CCDC7Q96M83 1385 aa20.84■□□□□ 0.93
PDCD6-211ENST00000515587 ALS2Q96Q42 1657 aa20.83■□□□□ 0.93
PDCD6-211ENST00000515587 NRKQ7Z2Y5 1582 aa20.81■□□□□ 0.92
PDCD6-211ENST00000515587 EDC4Q6P2E9 1401 aaKnown RBP20.81■□□□□ 0.92
PDCD6-211ENST00000515587 COL22A1Q8NFW1 1626 aaPredicted RBP20.81■□□□□ 0.92
PDCD6-211ENST00000515587 WASHC2AQ641Q2 1341 aa20.79■□□□□ 0.92
PDCD6-211ENST00000515587 TTC21AQ8NDW8 1320 aa20.79■□□□□ 0.92
PDCD6-211ENST00000515587 DEFB132Q7Z7B7 95 aa20.79■□□□□ 0.92
PDCD6-211ENST00000515587 ABTB2Q8N961 1025 aa20.79■□□□□ 0.92
PDCD6-211ENST00000515587 TTC21BQ7Z4L5 1316 aa20.78■□□□□ 0.92
PDCD6-211ENST00000515587 SSH2Q76I76 1423 aa20.78■□□□□ 0.92
PDCD6-211ENST00000515587 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.77■□□□□ 0.92
PDCD6-211ENST00000515587 PIK3C2AO00443 1686 aa20.75■□□□□ 0.91
PDCD6-211ENST00000515587 HAP1P54257 671 aaPredicted RBP20.75■□□□□ 0.91
PDCD6-211ENST00000515587 PANK3Q9H999 370 aa20.75■□□□□ 0.91
PDCD6-211ENST00000515587 KIF20BQ96Q89 1820 aa20.74■□□□□ 0.91
PDCD6-211ENST00000515587 BLMP54132 1417 aaPredicted RBP20.74■□□□□ 0.91
PDCD6-211ENST00000515587 NLRP13Q86W25 1043 aa20.74■□□□□ 0.91
PDCD6-211ENST00000515587 BCL9LQ86UU0 1499 aa20.74■□□□□ 0.91
PDCD6-211ENST00000515587 NSD3Q9BZ95 1437 aa20.73■□□□□ 0.91
PDCD6-211ENST00000515587 PLEKHG5O94827 1062 aa20.73■□□□□ 0.91
PDCD6-211ENST00000515587 NLRP6P59044 892 aa20.73■□□□□ 0.91
PDCD6-211ENST00000515587 NUTM2GQ5VZR2 741 aa20.73■□□□□ 0.91
PDCD6-211ENST00000515587 ABCA3Q99758 1704 aa20.73■□□□□ 0.91
PDCD6-211ENST00000515587 LRP5O75197 1615 aa20.72■□□□□ 0.91
PDCD6-211ENST00000515587 GJD4Q96KN9 370 aaPredicted RBP20.72■□□□□ 0.91
PDCD6-211ENST00000515587 CARD14Q9BXL6 1004 aa20.71■□□□□ 0.91
PDCD6-211ENST00000515587 PHRF1Q9P1Y6 1649 aaKnown RBP20.71■□□□□ 0.91
PDCD6-211ENST00000515587 CRYBG1Q9Y4K1 1723 aa20.7■□□□□ 0.9
PDCD6-211ENST00000515587 MARF1Q9Y4F3 1742 aaKnown RBP20.7■□□□□ 0.9
PDCD6-211ENST00000515587 PSDA5PKW4 1024 aaPredicted RBP20.69■□□□□ 0.9
PDCD6-211ENST00000515587 ZNF316A6NFI3 1004 aaPredicted RBP20.69■□□□□ 0.9
PDCD6-211ENST00000515587 NME9Q86XW9 330 aa20.69■□□□□ 0.9
PDCD6-211ENST00000515587 CABLES1Q8TDN4 633 aa20.69■□□□□ 0.9
PDCD6-211ENST00000515587 USP54Q70EL1 1684 aa20.69■□□□□ 0.9
PDCD6-211ENST00000515587 CGNL1Q0VF96 1302 aa20.69■□□□□ 0.9
PDCD6-211ENST00000515587 KNSTRNQ9Y448 316 aa20.68■□□□□ 0.9
PDCD6-211ENST00000515587 USP31Q70CQ4 1352 aa20.67■□□□□ 0.9
PDCD6-211ENST00000515587 COG3Q96JB2 828 aa20.66■□□□□ 0.9
PDCD6-211ENST00000515587 USP19O94966 1318 aa20.66■□□□□ 0.9
PDCD6-211ENST00000515587 ANKRD26Q9UPS8 1709 aa20.64■□□□□ 0.9
PDCD6-211ENST00000515587 SLIT3O75094 1523 aa20.64■□□□□ 0.9
PDCD6-211ENST00000515587 FYB1O15117 783 aa20.64■□□□□ 0.89
PDCD6-211ENST00000515587 SF3B2Q13435 895 aaKnown RBP20.64■□□□□ 0.89
PDCD6-211ENST00000515587 KCNH5Q8NCM2 988 aa20.64■□□□□ 0.89
PDCD6-211ENST00000515587 GGNBP2Q9H3C7 697 aa20.63■□□□□ 0.89
PDCD6-211ENST00000515587 OVOS2A0A0J9YW53 1432 aa20.62■□□□□ 0.89
PDCD6-211ENST00000515587 OVOS2Q6IE36 1432 aa20.62■□□□□ 0.89
PDCD6-211ENST00000515587 NSD2O96028 1365 aa20.62■□□□□ 0.89
PDCD6-211ENST00000515587 GCP02774 474 aa20.62■□□□□ 0.89
PDCD6-211ENST00000515587 SOX12O15370 315 aa20.6■□□□□ 0.89
PDCD6-211ENST00000515587 GLI3P10071 1580 aa20.59■□□□□ 0.89
PDCD6-211ENST00000515587 ZC3H6P61129 1189 aaKnown RBP20.59■□□□□ 0.89
PDCD6-211ENST00000515587 DDX10Q13206 875 aaKnown RBP20.59■□□□□ 0.89
PDCD6-211ENST00000515587 UNC5CLQ8IV45 518 aa20.58■□□□□ 0.89
PDCD6-211ENST00000515587 PRDM11Q9NQV5 511 aa20.58■□□□□ 0.89
PDCD6-211ENST00000515587 COL14A1Q05707 1796 aaKnown RBP20.58■□□□□ 0.89
PDCD6-211ENST00000515587 ZBTB7CA1YPR0 619 aa20.57■□□□□ 0.88
PDCD6-211ENST00000515587 PER1O15534 1290 aaPredicted RBP20.57■□□□□ 0.88
PDCD6-211ENST00000515587 SEPT12Q8IYM1 358 aa20.57■□□□□ 0.88
PDCD6-211ENST00000515587 NFAT5O94916 1531 aa20.57■□□□□ 0.88
PDCD6-211ENST00000515587 CPDO75976 1380 aa20.57■□□□□ 0.88
PDCD6-211ENST00000515587 KIAA0232Q92628 1395 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms