RNA–Protein interactions for RNA: ENST00000513720.5

AFP-205, Transcript of alpha fetoprotein, humanhuman

TSL 1 (best)

Gene AFP, Length 197 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-205ENST00000513720 CD151P48509 253 aa4.87□□□□□ -1.63
AFP-205ENST00000513720 SF3B2Q13435 895 aaKnown RBP4.87□□□□□ -1.63
AFP-205ENST00000513720 MIER1Q8N108 512 aa4.87□□□□□ -1.63
AFP-205ENST00000513720 LSM14AQ8ND56 463 aaKnown RBP4.87□□□□□ -1.63
AFP-205ENST00000513720 UBXN4Q92575 508 aa4.87□□□□□ -1.63
AFP-205ENST00000513720 RSPH9Q9H1X1 276 aaPredicted RBP4.87□□□□□ -1.63
AFP-205ENST00000513720 IGSF5Q9NSI5 407 aa4.87□□□□□ -1.63
AFP-205ENST00000513720 CWC25Q9NXE8 425 aaPredicted RBP4.87□□□□□ -1.63
AFP-205ENST00000513720 DONSONQ9NYP3 566 aa4.87□□□□□ -1.63
AFP-205ENST00000513720 PUF60Q9UHX1 559 aaKnown RBP4.87□□□□□ -1.63
AFP-205ENST00000513720 KIF3AQ9Y496 699 aa4.87□□□□□ -1.63
AFP-205ENST00000513720 CFAP65Q6ZU64 1925 aaKnown RBP4.87□□□□□ -1.63
AFP-205ENST00000513720 hCG_2014768A0A024R1R8 64 aa4.86□□□□□ -1.63
AFP-205ENST00000513720 TMCO5BA8MYB1 307 aa4.86□□□□□ -1.63
AFP-205ENST00000513720 PAK3O75914 559 aaPredicted RBP4.86□□□□□ -1.63
AFP-205ENST00000513720 CCDC175P0C221 793 aa4.86□□□□□ -1.63
AFP-205ENST00000513720 PAX7P23759 505 aa4.86□□□□□ -1.63
AFP-205ENST00000513720 GYS2P54840 703 aa4.86□□□□□ -1.63
AFP-205ENST00000513720 IGBP1P78318 339 aa4.86□□□□□ -1.63
AFP-205ENST00000513720 HDLBPQ00341 1268 aaKnown RBP4.86□□□□□ -1.63
AFP-205ENST00000513720 TBC1D10BQ4KMP7 808 aaPredicted RBP4.86□□□□□ -1.63
AFP-205ENST00000513720 GIMAP6Q6P9H5 292 aa4.86□□□□□ -1.63
AFP-205ENST00000513720 MAMSTRQ6ZN01 415 aa4.86□□□□□ -1.63
AFP-205ENST00000513720 C1orf131Q8NDD1 294 aaKnown RBP4.86□□□□□ -1.63
AFP-205ENST00000513720 TIGD1Q96MW7 591 aa4.86□□□□□ -1.63
AFP-205ENST00000513720 SLC26A8Q96RN1 970 aa4.86□□□□□ -1.63
AFP-205ENST00000513720 SENP7Q9BQF6 1050 aa4.86□□□□□ -1.63
AFP-205ENST00000513720 CHCHD3Q9NX63 227 aaKnown RBP4.86□□□□□ -1.63
AFP-205ENST00000513720 PDZRN3Q9UPQ7 1066 aa4.86□□□□□ -1.63
AFP-205ENST00000513720 BICDL2A1A5D9 508 aa4.85□□□□□ -1.63
AFP-205ENST00000513720 KLHL33A6NCF5 533 aa4.85□□□□□ -1.63
AFP-205ENST00000513720 A6NJR5 290 aa4.85□□□□□ -1.63
AFP-205ENST00000513720 NBPF7P0C2Y1 421 aaPredicted RBP4.85□□□□□ -1.63
AFP-205ENST00000513720 VDRP11473 427 aa4.85□□□□□ -1.63
AFP-205ENST00000513720 ATICP31939 592 aa4.85□□□□□ -1.63
AFP-205ENST00000513720 TRDNQ13061 729 aa4.85□□□□□ -1.63
AFP-205ENST00000513720 PSMD2Q13200 908 aa4.85□□□□□ -1.63
AFP-205ENST00000513720 BIRC2Q13490 618 aa4.85□□□□□ -1.63
AFP-205ENST00000513720 CT47A1Q5JQC4 288 aaPredicted RBP4.85□□□□□ -1.63
AFP-205ENST00000513720 MFSD4BQ5TF39 518 aa4.85□□□□□ -1.63
AFP-205ENST00000513720 C11orf96Q7Z7L8 435 aa4.85□□□□□ -1.63
AFP-205ENST00000513720 CCDC146Q8IYE0 955 aa4.85□□□□□ -1.63
AFP-205ENST00000513720 HS6ST3Q8IZP7 471 aa4.85□□□□□ -1.63
AFP-205ENST00000513720 CCDC47Q96A33 483 aaKnown RBP4.85□□□□□ -1.63
AFP-205ENST00000513720 MRRFQ96E11 262 aaKnown RBP4.85□□□□□ -1.63
AFP-205ENST00000513720 ARPC5LQ9BPX5 153 aa4.85□□□□□ -1.63
AFP-205ENST00000513720 CXorf56Q9H5V9 222 aa4.85□□□□□ -1.63
AFP-205ENST00000513720 GABBR1Q9UBS5 961 aa4.85□□□□□ -1.63
AFP-205ENST00000513720 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.85□□□□□ -1.63
AFP-205ENST00000513720 RAD54L2Q9Y4B4 1467 aa4.85□□□□□ -1.63
AFP-205ENST00000513720 PARNO95453 639 aaKnown RBP4.84□□□□□ -1.63
AFP-205ENST00000513720 ZSCAN20P17040 1043 aaPredicted RBP4.84□□□□□ -1.63
AFP-205ENST00000513720 NAT1P18440 290 aa4.84□□□□□ -1.63
AFP-205ENST00000513720 C4orf46Q504U0 113 aa4.84□□□□□ -1.63
AFP-205ENST00000513720 ZC3H12AQ5D1E8 599 aaKnown RBP4.84□□□□□ -1.63
AFP-205ENST00000513720 C1QTNF12Q5T7M4 302 aa4.84□□□□□ -1.63
AFP-205ENST00000513720 CCDC73Q6ZRK6 1079 aa4.84□□□□□ -1.63
AFP-205ENST00000513720 ZNF771Q7L3S4 317 aaPredicted RBP4.84□□□□□ -1.63
AFP-205ENST00000513720 TTC30BQ8N4P2 665 aa4.84□□□□□ -1.63
AFP-205ENST00000513720 VPS37AQ8NEZ2 397 aa4.84□□□□□ -1.63
AFP-205ENST00000513720 RSPH1Q8WYR4 309 aa4.84□□□□□ -1.63
AFP-205ENST00000513720 FRAT1Q92837 279 aaPredicted RBP4.84□□□□□ -1.63
AFP-205ENST00000513720 BORCS6Q96GS4 357 aa4.84□□□□□ -1.63
AFP-205ENST00000513720 AGBL1Q96MI9 1066 aa4.84□□□□□ -1.63
AFP-205ENST00000513720 NAP1L4Q99733 375 aaKnown RBP4.84□□□□□ -1.63
AFP-205ENST00000513720 PAGR1Q9BTK6 254 aa4.84□□□□□ -1.63
AFP-205ENST00000513720 CDCA7Q9BWT1 371 aaPredicted RBP4.84□□□□□ -1.63
AFP-205ENST00000513720 C22orf23Q9BZE7 217 aa4.84□□□□□ -1.63
AFP-205ENST00000513720 MED4Q9NPJ6 270 aa4.84□□□□□ -1.63
AFP-205ENST00000513720 CWC15Q9P013 229 aaKnown RBP4.84□□□□□ -1.63
AFP-205ENST00000513720 CALCOCO1Q9P1Z2 691 aa4.84□□□□□ -1.63
AFP-205ENST00000513720 CHMP3Q9Y3E7 222 aa4.84□□□□□ -1.63
AFP-205ENST00000513720 PAXBP1Q9Y5B6 917 aa4.84□□□□□ -1.63
AFP-205ENST00000513720 DDX49Q9Y6V7 483 aaKnown RBP4.84□□□□□ -1.63
AFP-205ENST00000513720 CSB-PGBD3P0DP91 1061 aa4.83□□□□□ -1.64
AFP-205ENST00000513720 CCDC92Q53HC0 331 aaPredicted RBP4.83□□□□□ -1.64
AFP-205ENST00000513720 C16orf87Q6PH81 154 aa4.83□□□□□ -1.64
AFP-205ENST00000513720 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.83□□□□□ -1.64
AFP-205ENST00000513720 LCA5Q86VQ0 697 aa4.83□□□□□ -1.64
AFP-205ENST00000513720 STK11IPQ8N1F8 1099 aa4.83□□□□□ -1.64
AFP-205ENST00000513720 GOLGA6L1Q8N7Z2 621 aa4.83□□□□□ -1.64
AFP-205ENST00000513720 JMYQ8N9B5 988 aa4.83□□□□□ -1.64
AFP-205ENST00000513720 KLHL23Q8NBE8 558 aa4.83□□□□□ -1.64
AFP-205ENST00000513720 UTP6Q9NYH9 597 aaKnown RBP4.83□□□□□ -1.64
AFP-205ENST00000513720 CCDC189A1A4V9 331 aa4.82□□□□□ -1.64
AFP-205ENST00000513720 CFAP69A5D8W1 941 aa4.82□□□□□ -1.64
AFP-205ENST00000513720 HSP90AB1P08238 724 aaKnown RBP4.82□□□□□ -1.64
AFP-205ENST00000513720 KCNA2P16389 499 aa4.82□□□□□ -1.64
AFP-205ENST00000513720 IBSPP21815 317 aaPredicted RBP4.82□□□□□ -1.64
AFP-205ENST00000513720 CCT2P78371 535 aaKnown RBP4.82□□□□□ -1.64
AFP-205ENST00000513720 SWT1Q5T5J6 900 aaKnown RBP4.82□□□□□ -1.64
AFP-205ENST00000513720 CCDC91Q7Z6B0 441 aa4.82□□□□□ -1.64
AFP-205ENST00000513720 TAX1BP1Q86VP1 789 aa4.82□□□□□ -1.64
AFP-205ENST00000513720 ZSCAN30Q86W11 494 aa4.82□□□□□ -1.64
AFP-205ENST00000513720 DZIP3Q86Y13 1208 aaKnown RBP4.82□□□□□ -1.64
AFP-205ENST00000513720 ANKRD13BQ86YJ7 626 aa4.82□□□□□ -1.64
AFP-205ENST00000513720 RBM46Q8TBY0 533 aaKnown RBP4.82□□□□□ -1.64
AFP-205ENST00000513720 SCYL1Q96KG9 808 aa4.82□□□□□ -1.64
AFP-205ENST00000513720 CDC5LQ99459 802 aaKnown RBP4.82□□□□□ -1.64
AFP-205ENST00000513720 INO80BQ9C086 356 aaPredicted RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms