RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 KDM4CQ9H3R0 1056 aa5.87□□□□□ -1.47
PDGFC-208ENST00000512711 ZBTB3Q9H5J0 574 aa5.87□□□□□ -1.47
PDGFC-208ENST00000512711 LILRB3O75022 631 aa5.86□□□□□ -1.47
PDGFC-208ENST00000512711 WNT7BP56706 349 aa5.86□□□□□ -1.47
PDGFC-208ENST00000512711 DESI1Q6ICB0 168 aa5.86□□□□□ -1.47
PDGFC-208ENST00000512711 PROCA1Q8NCQ7 364 aaPredicted RBP5.86□□□□□ -1.47
PDGFC-208ENST00000512711 HPS1Q92902 700 aa5.86□□□□□ -1.47
PDGFC-208ENST00000512711 UNC93B1Q9H1C4 597 aa5.86□□□□□ -1.47
PDGFC-208ENST00000512711 PLEKHG3A1L390 1219 aa5.85□□□□□ -1.47
PDGFC-208ENST00000512711 NUTM2BA6NNL0 878 aaPredicted RBP5.85□□□□□ -1.47
PDGFC-208ENST00000512711 NUTM2EB1AL46 878 aaPredicted RBP5.85□□□□□ -1.47
PDGFC-208ENST00000512711 NUTM2DQ5VT03 806 aaPredicted RBP5.85□□□□□ -1.47
PDGFC-208ENST00000512711 PRPF38BQ5VTL8 546 aaKnown RBP5.85□□□□□ -1.47
PDGFC-208ENST00000512711 NUTM2AQ8IVF1 878 aaPredicted RBP5.85□□□□□ -1.47
PDGFC-208ENST00000512711 MAP10Q9P2G4 905 aa5.85□□□□□ -1.47
PDGFC-208ENST00000512711 WIPF1O43516 503 aa5.84□□□□□ -1.47
PDGFC-208ENST00000512711 CTHP32929 405 aa5.84□□□□□ -1.47
PDGFC-208ENST00000512711 LCE2CQ5TA81 110 aa5.84□□□□□ -1.47
PDGFC-208ENST00000512711 TSC1Q92574 1164 aa5.84□□□□□ -1.47
PDGFC-208ENST00000512711 ALDH1A1P00352 501 aa5.83□□□□□ -1.48
PDGFC-208ENST00000512711 F12P00748 615 aaPredicted RBP5.83□□□□□ -1.48
PDGFC-208ENST00000512711 SNRPBP14678 240 aaKnown RBP5.83□□□□□ -1.48
PDGFC-208ENST00000512711 CLK2P49760 499 aaKnown RBP5.83□□□□□ -1.48
PDGFC-208ENST00000512711 CTDSPL2Q05D32 466 aa5.83□□□□□ -1.48
PDGFC-208ENST00000512711 TUSC1Q2TAM9 212 aa5.83□□□□□ -1.48
PDGFC-208ENST00000512711 STK17AQ9UEE5 414 aa5.83□□□□□ -1.48
PDGFC-208ENST00000512711 ZNF511Q8NB15 262 aa5.82□□□□□ -1.48
PDGFC-208ENST00000512711 EHBP1Q8NDI1 1231 aa5.82□□□□□ -1.48
PDGFC-208ENST00000512711 FOXJ1Q92949 421 aa5.82□□□□□ -1.48
PDGFC-208ENST00000512711 RSPH6AQ9H0K4 717 aa5.82□□□□□ -1.48
PDGFC-208ENST00000512711 ATP13A2Q9NQ11 1180 aa5.82□□□□□ -1.48
PDGFC-208ENST00000512711 TERTO14746 1132 aaKnown RBP5.81□□□□□ -1.48
PDGFC-208ENST00000512711 INSM1Q01101 510 aaPredicted RBP5.81□□□□□ -1.48
PDGFC-208ENST00000512711 SKIV2LQ15477 1246 aaKnown RBP5.81□□□□□ -1.48
PDGFC-208ENST00000512711 C4orf48Q5BLP8 95 aa5.8□□□□□ -1.48
PDGFC-208ENST00000512711 LRRN4Q8WUT4 740 aa5.79□□□□□ -1.48
PDGFC-208ENST00000512711 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.79□□□□□ -1.48
PDGFC-208ENST00000512711 TLL2Q9Y6L7 1015 aa5.79□□□□□ -1.48
PDGFC-208ENST00000512711 IL27Q8NEV9 243 aa5.78□□□□□ -1.48
PDGFC-208ENST00000512711 TRIM47Q96LD4 638 aa5.78□□□□□ -1.48
PDGFC-208ENST00000512711 VARSP26640 1264 aaKnown RBP5.77□□□□□ -1.49
PDGFC-208ENST00000512711 SH3D19Q5HYK7 790 aa5.77□□□□□ -1.49
PDGFC-208ENST00000512711 DDRGK1Q96HY6 314 aa5.77□□□□□ -1.49
PDGFC-208ENST00000512711 SENP2Q9HC62 589 aa5.77□□□□□ -1.49
PDGFC-208ENST00000512711 ATP1B4Q9UN42 357 aaPredicted RBP5.77□□□□□ -1.49
PDGFC-208ENST00000512711 GRM5P41594 1212 aa5.76□□□□□ -1.49
PDGFC-208ENST00000512711 WASF2Q9Y6W5 498 aa5.76□□□□□ -1.49
PDGFC-208ENST00000512711 BMP1P13497 986 aa5.75□□□□□ -1.49
PDGFC-208ENST00000512711 ARID5BQ14865 1188 aa5.75□□□□□ -1.49
PDGFC-208ENST00000512711 NEUROD2Q15784 382 aa5.75□□□□□ -1.49
PDGFC-208ENST00000512711 PPP2R2DQ66LE6 453 aa5.75□□□□□ -1.49
PDGFC-208ENST00000512711 HELBQ8NG08 1087 aaPredicted RBP5.75□□□□□ -1.49
PDGFC-208ENST00000512711 EPS8L1Q8TE68 723 aa5.75□□□□□ -1.49
PDGFC-208ENST00000512711 CAPN5O15484 640 aaPredicted RBP5.74□□□□□ -1.49
PDGFC-208ENST00000512711 BRPF1P55201 1214 aaPredicted RBP5.74□□□□□ -1.49
PDGFC-208ENST00000512711 AGERQ15109 404 aa5.74□□□□□ -1.49
PDGFC-208ENST00000512711 NR6A1Q15406 480 aa5.74□□□□□ -1.49
PDGFC-208ENST00000512711 TPRNQ4KMQ1 711 aa5.74□□□□□ -1.49
PDGFC-208ENST00000512711 TRIM46Q7Z4K8 759 aa5.74□□□□□ -1.49
PDGFC-208ENST00000512711 SH3RF1Q7Z6J0 888 aa5.74□□□□□ -1.49
PDGFC-208ENST00000512711 MPNDQ8N594 471 aa5.74□□□□□ -1.49
PDGFC-208ENST00000512711 CDK15Q96Q40 435 aa5.74□□□□□ -1.49
PDGFC-208ENST00000512711 KLF16Q9BXK1 252 aaPredicted RBP5.74□□□□□ -1.49
PDGFC-208ENST00000512711 AP1G2O75843 785 aa5.73□□□□□ -1.49
PDGFC-208ENST00000512711 NR3C2P08235 984 aa5.73□□□□□ -1.49
PDGFC-208ENST00000512711 NNTQ13423 1086 aa5.73□□□□□ -1.49
PDGFC-208ENST00000512711 SH3BP5LQ7L8J4 393 aa5.73□□□□□ -1.49
PDGFC-208ENST00000512711 FAM174AQ8TBP5 190 aa5.73□□□□□ -1.49
PDGFC-208ENST00000512711 KIFC2Q96AC6 838 aa5.73□□□□□ -1.49
PDGFC-208ENST00000512711 BPHLQ86WA6 291 aaPredicted RBP5.72□□□□□ -1.49
PDGFC-208ENST00000512711 OCSTAMPQ9BR26 566 aa5.72□□□□□ -1.49
PDGFC-208ENST00000512711 HMX1Q9NP08 348 aaPredicted RBP5.72□□□□□ -1.49
PDGFC-208ENST00000512711 MAGEB6P1A0A0J9YX57 407 aa5.71□□□□□ -1.5
PDGFC-208ENST00000512711 ADH1CP00326 375 aa5.71□□□□□ -1.5
PDGFC-208ENST00000512711 TIMP2P16035 220 aa5.71□□□□□ -1.5
PDGFC-208ENST00000512711 LORP23490 312 aaPredicted RBP5.71□□□□□ -1.5
PDGFC-208ENST00000512711 RFC5P40937 340 aa5.71□□□□□ -1.5
PDGFC-208ENST00000512711 SLC16A10Q8TF71 515 aa5.71□□□□□ -1.5
PDGFC-208ENST00000512711 CARD14Q9BXL6 1004 aa5.71□□□□□ -1.5
PDGFC-208ENST00000512711 ZFAND3Q9H8U3 227 aa5.71□□□□□ -1.5
PDGFC-208ENST00000512711 NXF1Q9UBU9 619 aaKnown RBP5.71□□□□□ -1.5
PDGFC-208ENST00000512711 WDR4P57081 412 aaKnown RBP5.7□□□□□ -1.5
PDGFC-208ENST00000512711 ARMC2Q8NEN0 867 aa5.7□□□□□ -1.5
PDGFC-208ENST00000512711 ITPKCQ96DU7 683 aa5.7□□□□□ -1.5
PDGFC-208ENST00000512711 C1QTNF2Q9BXJ5 285 aa5.7□□□□□ -1.5
PDGFC-208ENST00000512711 PRKCSHP14314 528 aaPredicted RBP5.69□□□□□ -1.5
PDGFC-208ENST00000512711 GMPRP36959 345 aa5.69□□□□□ -1.5
PDGFC-208ENST00000512711 ZFP42Q96MM3 310 aa5.69□□□□□ -1.5
PDGFC-208ENST00000512711 FKBPLQ9UIM3 349 aa5.69□□□□□ -1.5
PDGFC-208ENST00000512711 ZIC2O95409 532 aaPredicted RBP5.68□□□□□ -1.5
PDGFC-208ENST00000512711 USP17L8P0C7I0 530 aa5.68□□□□□ -1.5
PDGFC-208ENST00000512711 VEGFBP49765 207 aa5.68□□□□□ -1.5
PDGFC-208ENST00000512711 ERFEQ4G0M1 354 aa5.68□□□□□ -1.5
PDGFC-208ENST00000512711 PDXDC2PQ6P474 469 aa5.68□□□□□ -1.5
PDGFC-208ENST00000512711 GOPCQ9HD26 462 aa5.68□□□□□ -1.5
PDGFC-208ENST00000512711 FAM181BA6NEQ2 426 aa5.67□□□□□ -1.5
PDGFC-208ENST00000512711 SOBPA7XYQ1 873 aa5.67□□□□□ -1.5
PDGFC-208ENST00000512711 NR5A1Q13285 461 aa5.67□□□□□ -1.5
PDGFC-208ENST00000512711 NBPF14Q5TI25 921 aa5.67□□□□□ -1.5
PDGFC-208ENST00000512711 ZSCAN1Q8NBB4 408 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms